EWM26663.1, cds3961 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|585108751|gb|EWM26663.1| (hypothetical protein Naga_100001g149 [Nannochloropsis gaditana]) HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0 Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0 Query: 1 MRATKENYQSDRLRDRTESYPFPDEQDNDIPNRPTAHPLLRLSDQTEVLIRNDSRVGYPVEQPDVGPESFGWLFPAQQILLNYVLQEGTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASRSLFQERKPFVEMGKCWTFLRLKKEMLSDLRLKYTAADNRAKRTILRDKEVAGASFKDLLSGLKSKSQQLKYEEAGERAARRMAEEEERDRVMQGRESGETRRRNRPAIQGIGEKGGGVIRISKMYGGESGRGRGSRRIGGYGGCDQQHGRGAGEGAEFRRGDEQGMGRGVSRHRSPSQSSRPEKEAPSGTTMGESGSAPRQREESDEEGRRHWKRRCFRNEIDESEDDEARGESTEEVDDDRPVRG 490 MRATKENYQSDRLRDRTESYPFPDEQDNDIPNRPTAHPLLRLSDQTEVLIRNDSRVGYPVEQPDVGPESFGWLFPAQQILLNYVLQEGTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASRSLFQERKPFVEMGKCWTFLRLKKEMLSDLRLKYTAADNRAKRTILRDKEVAGASFKDLLSGLKSKSQQLKYEEAGERAARRMAEEEERDRVMQGRESGETRRRNRPAIQGIGEKGGGVIRISKMYGGESGRGRGSRRIGGYGGCDQQHGRGAGEGAEFRRGDEQGMGRGVSRHRSPSQSSRPEKEAPSGTTMGESGSAPRQREESDEEGRRHWKRRCFRNEIDESEDDEARGESTEEVDDDRPVRG Sbjct: 1 MRATKENYQSDRLRDRTESYPFPDEQDNDIPNRPTAHPLLRLSDQTEVLIRNDSRVGYPVEQPDVGPESFGWLFPAQQILLNYVLQEGTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASRSLFQERKPFVEMGKCWTFLRLKKEMLSDLRLKYTAADNRAKRTILRDKEVAGASFKDLLSGLKSKSQQLKYEEAGERAARRMAEEEERDRVMQGRESGETRRRNRPAIQGIGEKGGGVIRISKMYGGESGRGRGSRRIGGYGGCDQQHGRGAGEGAEFRRGDEQGMGRGVSRHRSPSQSSRPEKEAPSGTTMGESGSAPRQREESDEEGRRHWKRRCFRNEIDESEDDEARGESTEEVDDDRPVRG 490
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|505062375|ref|WP_015249477.1| (class I SAM-dependent methyltransferase [Singulisphaera acidiphila] >gi|430018677|gb|AGA30391.1| hypothetical protein Sinac_6305 [Singulisphaera acidiphila DSM 18658]) HSP 1 Score: 92.0485 bits (227), Expect = 4.766e-16 Identity = 56/209 (26.79%), Postives = 101/209 (48.33%), Query Frame = 0 Query: 38 PLLRLSDQTEVLIRNDSRVGYPVEQPDVGPESF-GWLFPAQQILLNYVLQEGTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASRS 245 P + +D ++ +R +P E+P V P WLFP+ Q + + + R++V++G++ G++T F+A+HAP AL+ ID W + P + + + R+ Y TFL W R VVP+R EG+ + LRPDV++ + + + L + FP ++GD +N+ V++ + +A R+ Sbjct: 458 PPVATADAKPAVLEFLARHPWPSEKPKVPPPPIRNWLFPSTQAVFEETIPQDARVIVEVGSFTGRSTRFLADHAPTALVIAIDHW-----RGSPEMANDPEVVAFLPRL--YETFLAECWLFRDR-----------VVPVRRSSLEGLREVADA-GLRPDVIFIDADHSYEAVRADLACALDLFPQARIIGDDWNWGSVRQAVQEACRA 647
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|1123616360|ref|WP_074306949.1| (class I SAM-dependent methyltransferase [Singulisphaera sp. GP187] >gi|1119032892|emb|SIO06122.1| Methyltransferase domain-containing protein [Singulisphaera sp. GP187]) HSP 1 Score: 83.1889 bits (204), Expect = 2.728e-13 Identity = 50/192 (26.04%), Postives = 95/192 (49.48%), Query Frame = 0 Query: 54 SRVGYPVEQPDVGPESF-GWLFPAQQILLNYVLQEGTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASR 244 +R +P ++P+V P WLFP+ + +L + E R++V++G++ G++T F+ +HAP A++ ID W + P + + + R+ Y TFL W R V+P+R EG+ + + LRPDV++ + + + L + + FP ++GD +N+ V++ + R Sbjct: 474 ARHPWPDKKPEVPPPPIRNWLFPSTREVLERTIPEDARVIVEVGSFTGRSTRFLTDHAPAAIVIAIDHW-----RGSPEMANDPELVAWLPRL--YETFLAECWLYRDR-----------VIPVRRSSVEGLQEVAAA-GLRPDVIFIDADHSYEAVRADLSSTLDLFPQARIIGDDWNWESVRQAVQAVCR 646
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|551609184|ref|XP_005785813.1| (hypothetical protein EMIHUDRAFT_253146 [Emiliania huxleyi CCMP1516] >gi|485639022|gb|EOD33384.1| hypothetical protein EMIHUDRAFT_253146 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.4034 bits (176), Expect = 7.908e-11 Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 0 Query: 71 GWLFPAQQILLNYVLQE-GTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFAN----IDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLA 240 GW+ + +L +L+E R VV+LG++ G T + E APR +F +D WD L A PSL + + + + + +A FL N W R V PLRM +G+A + + L D++Y + + L A FP ++ GD + +++VQ +A Sbjct: 16 GWVHRGNERMLRRLLEERQPRCVVELGSWCGLCTTLLCEAAPRLAVFAVDLWDAPHLLATPSLREQYTCDAQAMAILQAGELHAAFLHNLWPHRTR-----------VFPLRMPTGDGLAAI-ARLGAPVDLIYVDADHTYAAVLADLRASARLFPDALLCGDDWCWADVQLAVA 178
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|551568683|ref|XP_005770297.1| (hypothetical protein EMIHUDRAFT_209892 [Emiliania huxleyi CCMP1516] >gi|485621424|gb|EOD17868.1| hypothetical protein EMIHUDRAFT_209892 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0182 bits (175), Expect = 1.934e-10 Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 0 Query: 71 GWLFPAQQILLNYVLQE-GTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFAN----IDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLA 240 GW+ + +L +L+E R VV+LG++ G T + E APR +F +D WD L A PS + + + + + +A FL N W R V PLRM +G+A + + L D++Y + + L A FP ++ GD + +++VQ +A Sbjct: 51 GWVHRGNERMLRRLLEERQPRCVVELGSWCGLCTTLLCEAAPRLAVFAVDLWDAPHLLATPSQREQYTCDAQAMAILQAGELHAAFLHNLWPHRTR-----------VFPLRMPTGDGLAAI-ARLGAPVDLIYVDADHTYAAVLADLRASARLFPDALLCGDDWCWADVQLAVA 213
BLAST of EWM26663.1 vs. NCBI_GenBank
Match: gi|551575071|ref|XP_005773264.1| (hypothetical protein EMIHUDRAFT_241782 [Emiliania huxleyi CCMP1516] >gi|485624862|gb|EOD20835.1| hypothetical protein EMIHUDRAFT_241782 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0182 bits (175), Expect = 2.045e-10 Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 0 Query: 71 GWLFPAQQILLNYVLQE-GTRIVVQLGAYLGKTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFAN----IDLFERIPFYATFLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYWEGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLA 240 GW+ + +L +L+E R VV+LG++ G T + E APR +F +D WD L A PS + + + + + +A FL N W R V PLRM +G+A + + L D++Y + + L A FP ++ GD + +++VQ +A Sbjct: 51 GWVHRGNERMLRRLLEERQPRCVVELGSWCGLCTTLLCEAAPRLAVFAVDLWDAPHLLATPSQREQYTCDAQAMAILQAGELHAAFLHNLWPHRTR-----------VFPLRMPTGDGLAAI-ARLGAPVDLIYVDADHTYAAVLADLRASARLFPDALLCGDDWCWADVQLAVA 213 The following BLAST results are available for this feature:
BLAST of EWM26663.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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