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Properties
| Property Name | Value |
|---|
| Product | dpy-30-like protein |
| Orig transcript id | gnl|cribi|Naga_100001g153.8108.mrna |
| Orig protein id | gnl|cribi|Naga_100001g153.8108 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:527216..528909 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3968 ID=rna3968|Name=rna3968|organism=Nannochloropsis gaditana|type=mRNA|length=1856bp
TGCTCGCCCCTTTTGATTCGTCTCCCGCCCAATTATATTAAAATGCCTAG
AATTAAGTTGGGTCGTCTGCATAGTTCTATCACAGCCCACTGAAGTCATT
CAGTGGACATCAAGATATGTCAGCCTCCTTTCTGTGTTGCATTATTTTTC
CTGATTGTAAATACTTGTAAGCGGCCACCTTCTCCAGTCAATGTCCGTTG
AGGGACTTTTTGTCTTTCAAAACTCAAAATTATTCTTCAATGCTTGAATC
GACCCAGCCTTTTTTTGATGCTGCCTCAATCCGCAATAGCTTCATCCAAA
GGGACGAACCAAGACTTTTGATGTCGACATGGTTGTGTCACCGACCGCAT
ACGCGGCGACACTGAATCGAGTAGTGGAGCAACGTGTGCTTTACCATAAG
CGCCTCAACGCTTGACTTAAGTCTCTTCTTTATCGGACAGGCGGCCTTGT
AAGATTAAGGCGACTTGTGATACCTCCATAAATCCCGATGGCACCCCTAA
GCAAAAATGCTAGTCCGCAGGATTTGTTTAATGGTGCCGTTCTTCAGTGT
GTCGAGGCCGCGACCTTAGGGATGCCTTTCGAAGTCTGGAAAACGCGAAT
GGGGCGATTTCGGACTGAGTCGACGCTCGAAGCATTCAGAAACGTGTACA
AAGATGGAGGAGGTGTGAGCGCATTTTGGCGGGGGACCTCAGCCAAGATG
GTGGAGAGCGCCAGCAAAGGTGCGATCCTTCTTTTTTCGAAGGAGGCTAT
TGCCAATTCCTTGTTGGCCTCTGGAGTCTCGCAGACCACAACAGGGTTTT
TGGCAGGAGCTGGCGGCGGTGTGTGTCAGGTGGTGGTAATGGGGCCTTGT
ACCTTCCTGGTAACAGCAGCAGTAACAGGCGGCGGTAAAGAAGTATCTGT
GTGGACGACGGCAAGAGAAGTTTGGCTCAGCAAAGGGATCAAAGGATTTT
ATCCGGGAGGAACTGCCATCGCTTTCCGTCAAGCGACGAACTGGGCTTCA
CGTCAGGGGTTTACCGAGGCAGTGAGGGAGCGATTCAAGGTGTTGTTTCA
CGATGGGGACAGCAAGGCCAAACTCACAGTAACCCAGGAGGCCTTTGCTG
GCATAATTGGCGGTGCGCTCTCTTGCTGGAATCACCCATTTGAAGTGGCA
CGGATAGAAATGCAGGCGGCTGCCAATGCGGGCGAGGCTTCGCGATCCAT
GTTGAAGGTAATGAGCGGCATCGTGACCACAGAGGGTCCTGCAGGACTGT
TTAAAGGCGTAGTACCGCGCATTCTATTGGGCATTTGGCAGACACTTTTC
ATGGTGACGGGAGCCAAGCTGCTAAAAGGATTCCTTGCTGATGGCAAATG
AGCGTCCTGCAGCTGTGCGTAAAACTCACACCCTTCGTGCCTCAAGATTT
CTGGTCACATCTCAAAAACTCCCTTACAAATTGGTGAACCGCATATTCAT
GGGCAGTCTGCTTGTCTCAGACTGCCGCGCTTCTCATGACTCCAAGAAAC
CGGGGAAGAGGCAAGGAAATCGAGAAAACAGGTCATCGCAACTTAGTCGG
TATGATCCGTTCTTGCGGAGCGTATTGTTTACGGAAAAGAAAACTCAACA
ACGTACTTGAATTTTTGCACATATCCTCTCCCCCAATTTTGTATCTCTGC
TCTCAAAAAGACCCTTTTTTTTTAGAGTCGTGGATCTTAGGTGCACACTT
TCTTTTACTCGAACTTCTGAGGATTATTTTTGATCAAATATGCTGCTAGC
CACTCAATTGGGTTGCTAGGACGCTCTACAACAAGTTGAGACATGCCGTC
AAGAAGTATCGGCACAACTGTCTGATCCAAATAGGCGCGGATGGGCAGGG
ACTGCA back to topprotein sequence of rna3968 >rna3968-protein ID=rna3968-protein|Name=rna3968|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MDTSEVDERAQQAPHNQPTADGGEGELTATSSAIVSGDAPSPASGERNGM
IVGQQKEEIAESHGVNDGEGAGTAAVAQHEQDKVNMQSLPIRAYLDQTVV
PILLDGMSQLVVERPSNPIEWLAAYLIKNNPQKFE back to topmRNA from alignment at CM002462.1:527216..528909- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3968 ID=rna3968|Name=rna3968|organism=Nannochloropsis gaditana|type=mRNA|length=1694bp|location=Sequence derived from alignment at CM002462.1:527216..528909- (Nannochloropsis gaditana)
AGATTCATGGCTGACGGGTACGCACTCTACATTGCATCGCGGACGCAGGC
CCGGGCGCCGGCGTCACGCCCTGGCATGTGACCACTGGGCCACGCCTTCT
AAGAAGCCGCCACTAGGAGCGTTCGTGCCATTTTTAGCAATGAGCGATCA
CTCGGAGAGATGAACAGGGATTTCCCTCGTCCGGAAAGGGTCTCAGCTAC
TCGTCTTAGACAAGGAAACGCGCTATCCATCCCTGGCTGTCTTCATTTAC
TTTTTTAACTGCACATGGGGGAGCTTGTTGTCTCGAGATACCCCCCAGCT
CTTGAGACGTTGTGCTAAAGTTTCAAAGAAAGAATTTTTCTCTCTATTCT
CATAGTTTTTTCTGAAACCTGTCCCTCCGCGCAAATGTGGCTCAGGTACC
TGTCGCCGTTATATCTACGGTTGAACGACATTAAGACAGATGGATACGTC
GGAAGTGGATGAACGTGCGCAGCAAGCACCGCATAATCAGCCGACGGCCG
ATGGAGGAGAGGGCGAGCTGACGGCCACCTCTTCGGCAATAGTGAGTGGG
GATGCCCCCTCCCCTGCGAGTGGAGAAAGAAATGGAATGATTGTTGGTCA
ACAGAAGGAAGAAATTGCCGAATCACACGGTGTGAATGATGGGGAGGGGG
CAGGCACAGCCGCAGTAGCTCAACATGAGCAAGACAAGGTAAACATGCAG
TCCCTGCCCATCCGCGCCTATTTGGATCAGACAGTTGTGCCGATACTTCT
TGACGGCATGTCTCAACTTGTTGTAGAGCGTCCTAGCAACCCAATTGAGT
GGCTAGCAGCATATTTGATCAAAAATAATCCTCAGAAGTTCGAGTAAAAG
AAAGTGTGCACCTAAGATCCACGACTCTAAAAAAAAAGGGTCTTTTTGAG
AGCAGAGATACAAAATTGGGGGAGAGGATATGTGCAAAAATTCAAGTACG
TTGTTGAGTTTTCTTTTCCGTAAACAATACGCTCCGCAAGAACGGATCAT
ACCGACTAAGTTGCGATGACCTGTTTTCTCGATTTCCTTGCCTCTTCCCC
GGTTTCTTGGAGTCATGAGAAGCGCGGCAGTCTGAGACAAGCAGACTGCC
CATGAATATGCGGTTCACCAATTTGTAAGGGAGTTTTTGAGATGTGACCA
GAAATCTTGAGGCACGAAGGGTGTGAGTTTTACGCACAGCTGCAGGACGC
TTGTGTAAAGAAGTTGGGACGGAAAGAGTAATTAAATTGGTCACGAAAAA
TGAGGTCTGTGCTGTCAAAACGACCAAAGTCATAGAGACATTGCATAAGA
ATATGTGAAAACCGTGCAGACGGTTACAAAAGCAATGATATGGCACCAAA
TAGGGAGTGCACTGGATGCGCTTTGACTATGCTCACGGAGCTCACCTCAT
TTGCCATCAGCAAGGAATCCTTTTAGCAGCTTGGCTCCCGTCACCATGAA
AAGTGTCTGCCAAATGCCCAATAGAATGCGCGGTACTACGCCTTTAAACA
GTCCTGCAGGACCCTCTGTGGTCACGATGCCGCTCATTACCTTCAACATG
GATCGCGAAGCCTCGCCCGCATTGGCAGCCGCCTGCATTTCTATCCGTGC
CACTTCCTGAAAAATGTTGCCCGTGAAATAAAAAATGTGCCATGACTTAG
ATATAAAATAGGATGACAGGCAATATACGAAAGAAGCAAAGCGC back to topCoding sequence (CDS) from alignment at CM002462.1:527216..528909- >rna3968 ID=rna3968|Name=rna3968|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002462.1:527216..528909- (Nannochloropsis gaditana)
ATGGATACGTCGGAAGTGGATGAACGTGCGCAGCAAGCACCGCATAATCA
GCCGACGGCCGATGGAGGAGAGGGCGAGCTGACGGCCACCTCTTCGGCAA
TAGTGAGTGGGGATGCCCCCTCCCCTGCGAGTGGAGAAAGAAATGGAATG
ATTGTTGGTCAACAGAAGGAAGAAATTGCCGAATCACACGGTGTGAATGA
TGGGGAGGGGGCAGGCACAGCCGCAGTAGCTCAACATGAGCAAGACAAGG
TAAACATGCAGTCCCTGCCCATCCGCGCCTATTTGGATCAGACAGTTGTG
CCGATACTTCTTGACGGCATGTCTCAACTTGTTGTAGAGCGTCCTAGCAA
CCCAATTGAGTGGCTAGCAGCATATTTGATCAAAAATAATCCTCAGAAGT
TCGAGTAA back to top
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