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Properties
| Property Name | Value |
|---|
| Product | mitochondrial carrier |
| Orig transcript id | gnl|cribi|Naga_100001g155.8091.mrna |
| Orig protein id | gnl|cribi|Naga_100001g155.8091 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:525762..528214 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3967 ID=rna3967|Name=rna3967|organism=Nannochloropsis gaditana|type=mRNA|length=3746bp
GCTTTAAGAGCGCTTTCAGTGAGATTATGAATAGAGTTGTTCTGCCAATC
GACAAGATATTTCACTATCAAGCTTACTTTCCCTCTTCAGACCCCAACTC
TTCGTCATATGGCACAAACCGAACGCCGGGAGGCATTGAGCAAGCCACAG
GCACTTGAAGGCGAATGAAAGCAACGGTAAGGGACGGCTGAATCGTCCAG
ATAGAGCGTGTCAAGACATTGTTGGTTGATTTTTGGTGCAGAAAAATGCC
TGCCATAGTTTATATCCTGACAACTTTCTTGCAACGCAATTGGTACGGAA
AAAAGCTGGCGGTGGGAAGGGGAGGAGGTTGCAGCGGTTGCTGCCATTTT
AGGGTCACGCACATGCGAGCTCATCATATCGTCTCAATCTGCACACGCCA
GTGTATTACATGTGAATGGTAGAAGGGGATAGGATCGGAATCGACAAGTT
TTCAAACATGTCTCTTTTGGCAATGTGGAAAGCAGTCGTGGCCAGCAGTG
GGAGCGATACCGCTTTGCGAGTGGTGACGAATCTCCCTATCGACGACCTT
TCTGAATATAGCCGAAATTATGTACGAGATTTGACATTTGAGTATCTGGA
TCGATACAGCAATAGTCTTTCAAAGCTTTTATTGAAAGCAGGCGTCCTTC
CAGGGGACCGCATCGGACTTCACTTTCATGCCTCAGATCCAGGAGAAATA
ATTTCCTTGCTAGCCGTGCTAAAGTGTGCCGCGATATATGTTGCACTGGA
CAACGCTACCTGTGGGAGAATTGTCTCTGACGCAGGCGTGCGATTAGTTT
TGGTCGGTGGTCGGGAAAATGTAGGAAAATCAACTATTTTTCTACCAAAT
AAAACTCCCTTGTTGCGGATTGGGCGGTGGGGAGACATCTCTGAAGGCGA
TGAGCTCATCAGACTGCCTTTGCCTGATCCAGAACCTCCTCGCAGCAGCT
TAGATGGCGCATTCAATATCCTCTATACCTCCGGGAGTTCGGGCCCATCC
AAAGGTGTCGTTGGAAGGGAAAAAGGTTTTGTCTATCGGATCGGCTGGAT
GCATCAGGCTTTTCCTTTTATCAAAGACAAGGAATTAGTGCTTCGACGGA
CACCACTCGCGTTTGTTGATTCGGTGTGGGAGATATGGGGGGCCCTCCTG
GCAGGTGTACCATTATGTATCCATTTGACTAGTCTTGGAATGCCAGACCC
TGCATTTTTCCAATGTCTCGGGGTTACAAGGGCGACATTGACACCTTCTC
TGCTTGTGAATCTCCTTCACTGCAATGCGCCTATATTAAGCCGAGGACAG
TTGCGCTTCTGTTTATGCAGCGGAGAGACTCTGTCGTTCATCACGGCGAG
AACATTATTGATGCGTGCACCTTTATGTACGATTATTCATCTGTACGGTT
CGACGGAAGTCTCTGGGGACGCGTCATGGACGACATTAACTACAGGTGAT
CTGGAATATGGAAAAACCGCGAACTTGGACATCGTTCCTCTTGGTAAACC
TCTTCCCGGGACGCGCATGTGGCTGGTGGGGTCCGAAACATCAACGAAAC
TGGAGGTGGGGCAAATTGGCATGCCTGTTGACATGAATGGAGAGCTCTGG
GTAGAAGGACCAGGCGTTGCGCTAGGTTACTACGGCAAGCAAGGCATTCA
TTCCAATTTTGTAGCTAAAGAACGCGATGGCCATCCAGTATTTAAAACGG
GAGATTTGGTTAGGTGTATTTCGGATACGACTAATACAAGTCTTTATTTT
CTCCATCGAAGGGATTCTTCAGCGAAAGTCCGAGGGGTTTGGATACACTT
GGAGGAGGGGGAACGTGAGCTGGCTCTGGCGCTTGGCCTAAATTCTAAGG
AAGAATTGGGACTTAGTGTCGTTTCGAGCAACACAGATACGGAGAATTCT
GAGCTGTTAATAGCCCTAACATGGAAGGCAGCCCAATCGTGGCCGAATCT
GCCCAAGTTAAGACAACGGTTAATTGGACGAGGAATCTCACCAGAGCTCA
TGCCGACACGAATAGTTATTGGTATGAAAGATCAGCTATTGCCCCTTACT
TCAAATGGAAAGCTGGATCGACAGATGTTATCTACTTGGGGCTCTGAAGT
AGCATCAAGATGCACATCTTACGCAGAGATGGTGAGATCAAGATTCAAAG
ATGATTCTAGTGGGTATTGGTTGGAATTTTGTTTCTCAAAGCTTGTTGGT
ACTCAAGACGAAAATCATATAGGGCTTGGTCTATTTCAGCGTGGAGGCCA
TTCACTTCTAGCAATGCAAGCATTATACCACATTGAGCGGCATTTTAAAG
CAGCAAGCGCTGGCGTAATGATAGAAGATATGGCCCGACCAGTTGCTGAG
ATTTCGAAAAAGATAGGCAAAAATCGGGACACATTGCCGAGAAAGCGAGG
CAGAAGCTTTACCGCCGAAACAATTTCAGATAGAAATCAACTTCCTACAA
TGTTGCAGGCTTGGACTTTTGAATTTGAAAAATGCGTGGATGCGCAACCA
TGTGTCGTATCATTAGATAACGGTGAGCGTTTGATAATTGTCGGTTCTCA
TGATCATTATATTGCTGCTTTAGAAGCGAACACAGGAAAGGTTAAGTGGC
GCTCTCATACGAGCGGTCGTATCGAAGGAAAAGTAGCAGTACAAAATGAT
CTCATTTTCGTACCCTGCCTTGATTACCGACTCTATGCCTTCTCATTGGT
AACGGGAGAGCTTGCATGGACTTTTATAACACAGGGAGAGTTAAAATGTA
CACCTCTCCCTCTCTGGCTTCCAAGTCCTACTCATGACGAATCCAAAGGA
ATCTCGCTCGTCCTCTTCGGAAGTTACGATGGTAGAATATACGTCGTTGA
AGCATCATCGGGAGCATGCTTTGCGAAACCGTTTCCTCTCCAAGGTAGTC
CTTATGCTTCCCCGATTGTAATTCCTGGTGAAAAGCGGAATTCAGACTCG
GATGAGCGAATTATTACTGTAACAAACCGCGGACGTGTTGCACAACTGAA
ACTGGAAAGAGAAGGAATGGTGCTGAAAGGAGCACACTTAAGATGGGCTC
TACATTCTGATTGGGAACAAGAAATCGGGTGCGCTGTATTCACGACGCCT
GTTTATTCGACAACAACTGCATATTTGGTATTTGGTGGAACGGACGGCGC
AGTTGTAGCTTTGGATCCATTCCACGGGGGATCTATAGTATGGCGAATCC
TACTCGACCAAGTTCAATCATCGCCAATCTTTATTTCACCATGTCTTATG
CCGCGCAACTCGGAAACGGAAATAGAGCTTGTCCTAATAGCCTGCCAAAC
ATCTTTGTATTGTATCCAGACAAGCTCTGGAAAGCATTGCTGGAAGAGAA
AATTAGAGACGAGGCCTGATGAAGTGATAACTGGACAACCCACATTCCTA
GAGGGCAGCCTAATCGTCCTATTGACAACACAATTTGGCAAGTTGTTGCT
TTTAAATCTCGACAGTGAGCTCGATGCAGTCGATACAGGGACAAGGGAGC
TCATTCTTACGGGCGAAAGTCGTTTGACAAGTCCAGCAATTATCACCTTA
CCTAAGGAAACAGTATTTCCTTACAGGAAATCCTGGCAATGTTCAATAGG
CTCTAGAGACAACAAAGTGTACATGATAAATATTTCTGGTTGATTGGATT
TGTGTATTGAAAATGGATAGGACAGAGTCTTAACCAGATATGTCTCATCA
TGTGAGTGATTTTTGAAAGAAGTAAAAACCATGTGAAACGAAATGG back to topprotein sequence of rna3967 >rna3967-protein ID=rna3967-protein|Name=rna3967|organism=Nannochloropsis gaditana|type=polypeptide|length=287bp
MAPLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAF
RNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQT
TTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKG
IKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQ
EAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEG
PAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK back to topmRNA from alignment at CM002462.1:525762..528214+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3967 ID=rna3967|Name=rna3967|organism=Nannochloropsis gaditana|type=mRNA|length=2453bp|location=Sequence derived from alignment at CM002462.1:525762..528214+ (Nannochloropsis gaditana)
TGCTCGCCCCTTTTGATTCGTCTCCCGCCCAATTATATTAAAATGCCTAG
AATTAAGTTGGGTCGTCTGCATAGTTCTATCACAGCCCACTGAAGTCATT
CAGTGGACATCAAGATATGTCAGCCTCCTTTCTGTGTTGCATTATTTTTC
CTGATTGTAAATACTTGTAAGCGGCCACCTTCTCCAGTCAATGTCCGTTG
AGGGACTTTTTGTCTTTCAAAACTCAAAATTATTCTTCAATGCTTGAATC
GACCCAGCCTTTTTTTGATGCTGCCTCAATCCGCAATAGCTTCATCCAAA
GGGACGAACCAAGACTTTTGATGTCGACATGGTTGTGTCACCGACCGCAT
ACGCGGCGACACTGAATCGAGTAGTGGAGCAACGTGTGCTTTACCATAAG
CGCCTCAACGCTTGACTTAAGTCTCTTCTTTATCGGACAGGCGGCCTTGT
AAGATTAAGGCGACTTGTGATACCTCCATAAATCCCGATGGCACCCCTAA
GCAAAAATGCTAGTCCGCAGGATTTGTTTAATGGTGCCGTTCTTCAGTGT
GTCGAGGCCGCGACCTTAGGGATGCCTTTCGAAGTCTGGAAAACGCGAAT
GGGGCGATTTCGGACTGAGTCGACGCTCGAAGCATTCAGAAACGTGTaca
aagatggaggaggtgtgagCGCATTTTGGCGGGGGACCTCAGCCAAGATG
GTGGAGAGCGCCAGCAAAGGTGCGATCCTTCTTTTTTCGAAGGAGGCTAT
TGCCAATTCCTTGTTGGCCTCTGGAGTCTCGCAGACCACAACAGGGTGAG
CACATTGGGAAAGTATAGGAGTAATGTGAGGAGTTTTCCTTCACATGGGC
TTGCCTCACTGTATGAATGGCGGTCCAATACTCGTAGTGACTTCAATGGT
GCGCTACAGATACTGGTTTGCCTTGATGTCCGATCGTCTTTTGGTCTTTA
TCTCATATGGCTTGCAACCGCTATCCGTAACGCTGCAGGTTTTTGGCAGG
AGCTGGCGGCGGTGTGTGTCAGGTGGTGGTAATGGGGCCTTGTACCTTCC
TGGTAACAGCAGCAGTAACAGGCGGCGGTAAAGAAGTATCTGTGTGGACG
ACGGCAAGAGAAGTTTGGCTCAGCAAAGGGATCAAAGGATTTTATCCGGG
AGGAACTGCCATCGCTTTCCGTCAAGCGACGAACTGGGCTTCACGTCAGG
GGTTTACCGAGGCAGTGAGGGAGCGATTCAAGGTGTTGTTTCACGATGGG
GACAGCAAGGCCAAACTCACAGTAACCCAGGAGGCCTTTGCTGGCATAAT
TGGCGGTGCGCTCTCTTGCTGGAATCACCCATTTGTGAGTCTTGGACTGC
TTTAGTTGTCGAAGCTCTGGAGGTTGAGGGCATTGCTGGTCGTAAAGCTT
GGAATGCACAGCACGCGGAGGAAAATCGCGACATCTGCCTCCCTTTGTTT
GTCTGCGCTTTGCTTCTTTCGTATATTGCCTGTCATCCTATTTTATATCT
AAGTCATGGCACATTTTTTATTTCACGGGCAACATTTTTCAGGAAGTGGC
ACGGATAGAAATGCAGGCGGCTGCCAATGCGGGCGAGGCTTCGCGATCCA
TGTTGAAGGTAATGAGCGGCATCGTGACCACAGAGGGTCCTGCAGGACTG
TTTAAAGGCGTAGTACCGCGCATTCTATTGGGCATTTGGCAGACACTTTT
CATGGTGACGGGAGCCAAGCTGCTAAAAGGATTCCTTGCTGATGGCAAAT
GAGGTGAGCTCCGTGAGCATAGTCAAAGCGCATCCAGTGCACTCCCTATT
TGGTGCCATATCATTGCTTTTGTAACCGTCTGCACGGTTTTCACATATTC
TTATGCAATGTCTCTATGACTTTGGTCGTTTTGACAGCACAGACCTCATT
TTTCGTGACCAATTTAATTACTCTTTCCGTCCCAACTTCTTTACACAAGC
GTCCTGCAGCTGTGCGTAAAACTCACACCCTTCGTGCCTCAAGATTTCTG
GTCACATCTCAAAAACTCCCTTACAAATTGGTGAACCGCATATTCATGGG
CAGTCTGCTTGTCTCAGACTGCCGCGCTTCTCATGACTCCAAGAAAccgg
ggaagaggcaaggAAATCGAGAAAACAGGTCATCGCAACTTAGTCGGTAT
GATCCGTTCTTGCGGAGCGTATTGTTTACGGAAAAGAAAACTCAACAACG
TACTTGAATTTTTGCACATATCCTCTCCCCCAATTTTGTATCTCTGCTCT
CAAAAAGACCCTTTTTTTTTAGAGTCGTGGATCTTAGGTGCACACTTTCT
TTTACTCGAACTTCTGAGGATTATTTTTGATCAAATATGCTGCTAGCCAC
TCAATTGGGTTGCTAGGACGCTCTACAACAAGTTGAGACATGCCGTCAAG
AAGTATCGGCACAACTGTCTGATCCAAATAGGCGCGGATGGGCAGGGACT
GCA back to topCoding sequence (CDS) from alignment at CM002462.1:525762..528214+ >rna3967 ID=rna3967|Name=rna3967|organism=Nannochloropsis gaditana|type=CDS|length=2592bp|location=Sequence derived from alignment at CM002462.1:525762..528214+ (Nannochloropsis gaditana)
ATGGCACCCCTAAGCAAAAATGCTAGTCCGCAGGATTTGTTTAATGGTGC
CGTTCTTCAGTGTGTCGAGGCCGCGACCTTAGGGATGCCTTTCGAAGTCT
GGAAAACGCGAATGGGGCGATTTCGGACTGAGTCGACGCTCGAAGCATTC
AGAAACGTGTacaaagatggaggaggtgtgagCGCATTTTGGCGGGGGAC
CTCAGCCAAGATGGTGGAGAGCGCCAGCAAAGGTGCGATCCTTCTTTTTT
CGAAGGAGGCTATTGCCAATTCCTTGTTGGCCTCTGGAGTCTCGCAGACC
ACAACAGGGTTTTTGGCAGGAGCTGGCGGCGGTGTGTGTCAGGTGGTGGT
AATGGGGCCTTGTACCTTCCTGGTAACAGCAGCAGTAACAGGCGGCGGTA
AAGAAGTATCTGTGTGGACGACGGCAAGAGAAGTTTGGCTCAGCAAAGGG
ATCAAAGGATTTTATCCGGGAGGAACTGCCATCGCTTTCCGTCAAGCGAC
GAACTGGGCTTCACGTCAGGGGTTTACCGAGGCAGTGAGGGAGCGATTCA
AGGTGTTGTTTCACGATGGGGACAGCAAGGCCAAACTCACAGTAACCCAG
GAGGCCTTTGCTGGCATAATTGGCGGTGCGCTCTCTTGCTGGAATCACCC
ATTTGAAGTGGCACGGATAGAAATGCAGGCGGCTGCCAATGCGGGCGAGG
CTTCGCGATCCATGTTGAAGGTAATGAGCGGCATCGTGACCACAGAGGGT
CCTGCAGGACTGTTTAAAGGCGTAGTACCGCGCATTCTATTGGGCATTTG
GCAGACACTTTTCATGGTGACGGGAGCCAAGCTGCTAAAAGGATTCCTTG
CTGATGGCAAATGAATGGCACCCCTAAGCAAAAATGCTAGTCCGCAGGAT
TTGTTTAATGGTGCCGTTCTTCAGTGTGTCGAGGCCGCGACCTTAGGGAT
GCCTTTCGAAGTCTGGAAAACGCGAATGGGGCGATTTCGGACTGAGTCGA
CGCTCGAAGCATTCAGAAACGTGTacaaagatggaggaggtgtgagCGCA
TTTTGGCGGGGGACCTCAGCCAAGATGGTGGAGAGCGCCAGCAAAGGTGC
GATCCTTCTTTTTTCGAAGGAGGCTATTGCCAATTCCTTGTTGGCCTCTG
GAGTCTCGCAGACCACAACAGGGTTTTTGGCAGGAGCTGGCGGCGGTGTG
TGTCAGGTGGTGGTAATGGGGCCTTGTACCTTCCTGGTAACAGCAGCAGT
AACAGGCGGCGGTAAAGAAGTATCTGTGTGGACGACGGCAAGAGAAGTTT
GGCTCAGCAAAGGGATCAAAGGATTTTATCCGGGAGGAACTGCCATCGCT
TTCCGTCAAGCGACGAACTGGGCTTCACGTCAGGGGTTTACCGAGGCAGT
GAGGGAGCGATTCAAGGTGTTGTTTCACGATGGGGACAGCAAGGCCAAAC
TCACAGTAACCCAGGAGGCCTTTGCTGGCATAATTGGCGGTGCGCTCTCT
TGCTGGAATCACCCATTTGAAGTGGCACGGATAGAAATGCAGGCGGCTGC
CAATGCGGGCGAGGCTTCGCGATCCATGTTGAAGGTAATGAGCGGCATCG
TGACCACAGAGGGTCCTGCAGGACTGTTTAAAGGCGTAGTACCGCGCATT
CTATTGGGCATTTGGCAGACACTTTTCATGGTGACGGGAGCCAAGCTGCT
AAAAGGATTCCTTGCTGATGGCAAATGAATGGCACCCCTAAGCAAAAATG
CTAGTCCGCAGGATTTGTTTAATGGTGCCGTTCTTCAGTGTGTCGAGGCC
GCGACCTTAGGGATGCCTTTCGAAGTCTGGAAAACGCGAATGGGGCGATT
TCGGACTGAGTCGACGCTCGAAGCATTCAGAAACGTGTacaaagatggag
gaggtgtgagCGCATTTTGGCGGGGGACCTCAGCCAAGATGGTGGAGAGC
GCCAGCAAAGGTGCGATCCTTCTTTTTTCGAAGGAGGCTATTGCCAATTC
CTTGTTGGCCTCTGGAGTCTCGCAGACCACAACAGGGTTTTTGGCAGGAG
CTGGCGGCGGTGTGTGTCAGGTGGTGGTAATGGGGCCTTGTACCTTCCTG
GTAACAGCAGCAGTAACAGGCGGCGGTAAAGAAGTATCTGTGTGGACGAC
GGCAAGAGAAGTTTGGCTCAGCAAAGGGATCAAAGGATTTTATCCGGGAG
GAACTGCCATCGCTTTCCGTCAAGCGACGAACTGGGCTTCACGTCAGGGG
TTTACCGAGGCAGTGAGGGAGCGATTCAAGGTGTTGTTTCACGATGGGGA
CAGCAAGGCCAAACTCACAGTAACCCAGGAGGCCTTTGCTGGCATAATTG
GCGGTGCGCTCTCTTGCTGGAATCACCCATTTGAAGTGGCACGGATAGAA
ATGCAGGCGGCTGCCAATGCGGGCGAGGCTTCGCGATCCATGTTGAAGGT
AATGAGCGGCATCGTGACCACAGAGGGTCCTGCAGGACTGTTTAAAGGCG
TAGTACCGCGCATTCTATTGGGCATTTGGCAGACACTTTTCATGGTGACG
GGAGCCAAGCTGCTAAAAGGATTCCTTGCTGATGGCAAATGA back to top
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