EWM26580.1, cds3957 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|585108668|gb|EWM26580.1| (mitochondrial carrier [Nannochloropsis gaditana]) HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query: 1 MAPLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK 287
MAPLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK
Sbjct: 1 MAPLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK 287
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|1214710405|gb|OWZ21497.1| (Mitochondrial Carrier (MC) protein [Phytophthora megakarya]) HSP 1 Score: 415.616 bits (1067), Expect = 3.791e-144 Identity = 205/283 (72.44%), Postives = 238/283 (84.10%), Query Frame = 0
Query: 3 PLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
P K P+DLFNG +LQC+EAATLGMPFEVWKTRMGR+RTE+TL+AFRNV ++GGGVSAFW GT KMVESASKGAILLFSKEAI++SLL++GVSQ+ TGFLAGAGGGVCQVVVMGPCTFLVTAAVT G + +S V+ + GIKGFYPGGTAIAFRQATNWASRQGFTE VR +FKVLFH GD AKLTV QEA AGI+GG L+CWNHPFEVARI+MQ+AA+ GE ++M++V +V +G GLFKG+VPR+ LGIWQTLFMVTGAKL++ L D
Sbjct: 5 PSGKKVGPRDLFNGGLLQCLEAATLGMPFEVWKTRMGRYRTETTLQAFRNVMREGGGVSAFWAGTGPKMVESASKGAILLFSKEAISDSLLSAGVSQSATGFLAGAGGGVCQVVVMGPCTFLVTAAVT-GDRSISTSQRISNVYGTHGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGQFKVLFH-GDKDAKLTVAQEAGAGIVGGGLACWNHPFEVARIQMQSAADRGEPKQNMVQVFRTVVKEQGYGGLFKGIVPRLGLGIWQTLFMVTGAKLVRQALED 285
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|635370086|emb|CCI41766.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 412.535 bits (1059), Expect = 4.312e-143 Identity = 206/287 (71.78%), Postives = 240/287 (83.62%), Query Frame = 0
Query: 1 MAPLS--KNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
M+P S KNASP+DL NG +LQCVEAATLGMPFEVWKTRMGR+R E+TLEAFRNV K+GGG++AFW GT KMVESA+KGAILL+SKEAIANSLL+ GV + TGF+AGAGGGVCQVVVMGPCTFLVTAAVT G K +S R V+ + GIKGFYPGGTAIAFRQATNWASRQGFTE VR RFKV FH GD A+LTV QEA +GIIGGAL+CWNHPFEVARI+MQ+AA+ GE ++M++V ++ +G GLFKG++PR+ LGIWQTLFMVTGAKL+K L+
Sbjct: 1 MSPPSGRKNASPRDLLNGGILQCVEAATLGMPFEVWKTRMGRYRRETTLEAFRNVLKEGGGIAAFWAGTGPKMVESATKGAILLYSKEAIANSLLSMGVGEGLTGFMAGAGGGVCQVVVMGPCTFLVTAAVT-GDKSISTSQRIRNVFAAHGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGRFKVWFH-GDKNARLTVPQEAGSGIIGGALACWNHPFEVARIQMQSAADRGEPQQNMVQVFRTVIREQGYPGLFKGIIPRLGLGIWQTLFMVTGAKLVKQALSK 285
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|301122667|ref|XP_002909060.1| (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >gi|262099822|gb|EEY57874.1| Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4]) HSP 1 Score: 412.92 bits (1060), Expect = 4.888e-143 Identity = 205/282 (72.70%), Postives = 240/282 (85.11%), Query Frame = 0
Query: 6 KNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAR--EVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
K P+DLFNG +LQC+EAATLGMPFEVWKTRMGR+R+E+TL+AFRNV ++GGGVSAFW GT KMVESASKGAILLFSKEAI++SLL++G+SQ+ TGFLAGAGGGVCQVVVMGPCTFLVTAAVTG + S+ TT R V+ + GIKGFYPGGTAIAFRQATNWASRQGFTE VR +FKVLFH GD AKLTV QEA AGI+GG L+CWNHPFEVARI+MQ+AA+ GE ++M++V +V +G GLFKG+VPR+ LGIWQTLFMVTGAKL++ L D
Sbjct: 9 KKVGPRDLFNGGLLQCLEAATLGMPFEVWKTRMGRYRSETTLQAFRNVMREGGGVSAFWAGTGPKMVESASKGAILLFSKEAISDSLLSAGMSQSATGFLAGAGGGVCQVVVMGPCTFLVTAAVTG---DRSISTTQRIQNVYGTHGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGKFKVLFH-GDKDAKLTVAQEAGAGIVGGGLACWNHPFEVARIQMQSAADRGEPKQNMVQVFRTVVKEQGYGGLFKGIVPRLGLGIWQTLFMVTGAKLVRQALED 286
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|695427058|ref|XP_009529576.1| (hypothetical protein PHYSODRAFT_505357 [Phytophthora sojae] >gi|348676009|gb|EGZ15827.1| hypothetical protein PHYSODRAFT_505357 [Phytophthora sojae]) HSP 1 Score: 410.994 bits (1055), Expect = 2.810e-142 Identity = 202/280 (72.14%), Postives = 234/280 (83.57%), Query Frame = 0
Query: 6 KNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
K P+DLFNG +LQC+EAATLGMPFEVWKTRMGR+RTEST +AFRNV ++GGGVSAFW GT KMVESASKGAILLFSKEAI++SLL++GV Q+ TGFLAGAGGGVCQVVVMGPCTFLVT AVT G + +S V+ + G+KGFYPGGTAIAFRQATNWASRQGFTE VR RFKVLFH GD AKLTV QEA AGI+GG L+CWNHPFEVARI+MQ+AA+ GE ++M++V +V +G GLFKG+VPR+ LGIWQTLFMVTGAKL++ L D
Sbjct: 9 KKVGPRDLFNGGLLQCLEAATLGMPFEVWKTRMGRYRTESTTQAFRNVMREGGGVSAFWAGTGPKMVESASKGAILLFSKEAISDSLLSAGVGQSATGFLAGAGGGVCQVVVMGPCTFLVTGAVT-GDRSISTMQRIHNVYGAHGLKGFYPGGTAIAFRQATNWASRQGFTEIVRGRFKVLFH-GDKDAKLTVAQEAGAGIVGGGLACWNHPFEVARIQMQSAADRGEPKQNMVQVFRTVVKEQGYGGLFKGIVPRLGLGIWQTLFMVTGAKLVRQALED 286
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|675185301|ref|XP_008901535.1| (hypothetical protein PPTG_08316 [Phytophthora parasitica INRA-310] >gi|566029660|gb|ETI52571.1| hypothetical protein F443_04322 [Phytophthora parasitica P1569] >gi|567967293|gb|ETK92473.1| hypothetical protein L915_04176 [Phytophthora parasitica] >gi|567995737|gb|ETL45867.1| hypothetical protein L916_04130 [Phytophthora parasitica] >gi|568025007|gb|ETL99028.1| hypothetical protein L917_04030 [Phytophthora parasitica] >gi|568055436|gb|ETM52183.1| hypothetical protein L914_04142 [Phytophthora parasitica] >gi|568098797|gb|ETN13524.1| hypothetical protein PPTG_08316 [Phytophthora parasitica INRA-310] >gi|570328897|gb|ETO76845.1| hypothetical protein F444_07761 [Phytophthora parasitica P1976] >gi|570957461|gb|ETP22440.1| hypothetical protein F441_04267 [Phytophthora parasitica CJ01A1] >gi|570992906|gb|ETP50322.1| hypothetical protein F442_04288 [Phytophthora parasitica P10297] >gi|970635541|gb|KUF80408.1| Mitochondrial DNA replication protein YHM2 [Phytophthora nicotianae]) HSP 1 Score: 409.838 bits (1052), Expect = 6.266e-142 Identity = 200/280 (71.43%), Postives = 235/280 (83.93%), Query Frame = 0
Query: 6 KNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
K P+DLFNG +LQC+EAATLGMPFEVWKTRMGR+R+E+T++AFRNV ++GGGVSAFW GT KMVESASKGAILLFSKEAI++SLLA+GV Q+ TGFLAGAGGGVCQVVVMGPCTFLVT AVT G + +S V+ + GIKGFYPGGTAIAFRQATNWASRQGFTE VR +FKVLFH GD AKLTV QEA AGI+GG L+CWNHPFEVARI+MQ+AA+ GE ++M++V ++ +G GLFKG+VPR+ LGIWQTLFMVTGAKL++ L D
Sbjct: 9 KKVGPRDLFNGGMLQCLEAATLGMPFEVWKTRMGRYRSETTMQAFRNVMREGGGVSAFWAGTGPKMVESASKGAILLFSKEAISDSLLAAGVGQSATGFLAGAGGGVCQVVVMGPCTFLVTGAVT-GDRSISTMQRIHNVYGAHGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGQFKVLFH-GDKDAKLTVAQEAGAGIVGGGLACWNHPFEVARIQMQSAADRGEPKQNMVQVFRTVIKEQGYGGLFKGIVPRLGLGIWQTLFMVTGAKLVRQALED 286
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|1173931486|gb|OQR83879.1| (Mitochondrial Carrier (MC) Family [Achlya hypogyna]) HSP 1 Score: 406.371 bits (1043), Expect = 1.768e-140 Identity = 200/283 (70.67%), Postives = 233/283 (82.33%), Query Frame = 0
Query: 5 SKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK 287
+KN +DL NG +LQCVEAATLGMPFEVWKTRMGR+RTE+T++AF N+YK+GG SAFW GT AKMVES SKGAILL+SKEAIANSLLA+GV +T TGF+AGAGGGVCQVVVMGPCTFLVTAAV G K +S + V+ G+KGFYPGGTAIAFRQATNWASRQGFTE +R +FK+ FH+ D AKLTV QEA AG++GGALSCWNHPFEVARI+MQ AA GE ++M++V +V G AGLFKG++PR+ LGIWQTLFMVTGAKL+K L DGK
Sbjct: 8 AKNVGIRDLVNGGILQCVEAATLGMPFEVWKTRMGRYRTETTVQAFTNIYKNGG-ASAFWAGTGAKMVESGSKGAILLYSKEAIANSLLAAGVGETATGFIAGAGGGVCQVVVMGPCTFLVTAAVNGD-KSISTTQRIKSVYGQHGLKGFYPGGTAIAFRQATNWASRQGFTEIIRNQFKLAFHN-DPNAKLTVAQEAGAGVLGGALSCWNHPFEVARIQMQTAAERGEPKQNMMQVFKTVVKENGYAGLFKGIIPRVGLGIWQTLFMVTGAKLVKQALEDGK 287
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|953499454|emb|CEG39284.1| (mc family transporter [Plasmopara halstedii]) HSP 1 Score: 400.593 bits (1028), Expect = 3.420e-138 Identity = 196/280 (70.00%), Postives = 234/280 (83.57%), Query Frame = 0
Query: 6 KNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
K +DL NG +LQC+EAATLGMPFEVWKTRMGRFR+E+T++AFRNV ++GGG+SAFW GT KMVESASKGAILL+SKEAI+++LLA+GV ++ TGFLAGAGGGVCQVVVMGPCTFLVT AVT G + +S V+ + GIKGFYPGGTAIAFRQATNWASRQGFTE VR +FKVLFH GD AKLTV QEA AGI+GGAL+CWNHPFEVARI+MQ+AA+ GE ++M++V ++ +G GLFKG+VPR+ LGIWQTLFMVTGAKL++ L D
Sbjct: 9 KKVGLRDLINGGMLQCLEAATLGMPFEVWKTRMGRFRSETTMQAFRNVMREGGGISAFWAGTGPKMVESASKGAILLYSKEAISDTLLAAGVGKSATGFLAGAGGGVCQVVVMGPCTFLVTGAVT-GDRSISTMQRIFNVYGAHGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGQFKVLFH-GDKDAKLTVAQEASAGIVGGALACWNHPFEVARIQMQSAADRGEPKQNMVQVFRTVIKEQGYGGLFKGIVPRLGLGIWQTLFMVTGAKLVRQALED 286
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|669150136|ref|XP_008610630.1| (hypothetical protein SDRG_06618 [Saprolegnia diclina VS20] >gi|530737626|gb|EQC35868.1| hypothetical protein SDRG_06618 [Saprolegnia diclina VS20]) HSP 1 Score: 394.815 bits (1013), Expect = 5.427e-136 Identity = 193/283 (68.20%), Postives = 226/283 (79.86%), Query Frame = 0
Query: 5 SKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLADGK 287
SKN +DL NG VLQCVEAATLGMPFEVWKTRMGR+RTE+T++AFRN+Y+ GG AFW GT AKMVES SKGAILLFSKE IA+SL +GV +T GF++GAGGG+CQ VVMGPCTFLVTAAV G K +S + V+ G+KGFYPGGTAIAFRQATNWASRQGFTE +R RFKV+FHD D AKLTV QEA AG++GGALSCWNHPFEVARI+MQ AA GE ++M++V ++ G GLFKG++PR+ LGIWQTLFMVTGAKL+K L + K
Sbjct: 7 SKNVGVRDLVNGGVLQCVEAATLGMPFEVWKTRMGRYRTETTVQAFRNIYQ-AGGAKAFWAGTGAKMVESGSKGAILLFSKEMIASSLHTAGVGETAIGFISGAGGGICQTVVMGPCTFLVTAAVNGD-KSISTTQRIQNVYAQNGLKGFYPGGTAIAFRQATNWASRQGFTEIIRNRFKVIFHD-DPNAKLTVAQEAGAGVLGGALSCWNHPFEVARIQMQTAAERGEPKQNMVQVFRAVIKENGVGGLFKGIIPRVGLGIWQTLFMVTGAKLVKQALENDK 286
BLAST of EWM26580.1 vs. NCBI_GenBank
Match: gi|325180674|emb|CCA15079.1| (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14]) HSP 1 Score: 390.193 bits (1001), Expect = 2.974e-134 Identity = 202/283 (71.38%), Postives = 236/283 (83.39%), Query Frame = 0
Query: 3 PLSKNASPQDLFNGAVLQCVEAATLGMPFEVWKTRMGRFRTESTLEAFRNVYKDGGGVSAFWRGTSAKMVESASKGAILLFSKEAIANSLLASGVSQTTTGFLAGAGGGVCQVVVMGPCTFLVTAAVTGGGKEVSVWTTAREVWLSKGIKGFYPGGTAIAFRQATNWASRQGFTEAVRERFKVLFHDGDSKAKLTVTQEAFAGIIGGALSCWNHPFEVARIEMQAAANAGEASRSMLKVMSGIVTTEGPAGLFKGVVPRILLGIWQTLFMVTGAKLLKGFLAD 285
P KNASP+DL NG VLQCVEAATLGMPFEVWKTRMGR+R E+TLEAFRNV K+GGG++AFW GT KMVESA+KGAILL+SKEAIANSLL+ GV + TGF AGAGGGVCQVVVMGPCTFLVTAAVT G K ++ V+ ++GIKGFYPGGTAIAFRQATNWASRQGFTE VR RFK+ FH GD A+LTV QEA +GIIGGAL+CWNHPFEVARI+MQ+AA+ GE ++M++V ++ +G GLFKG++PR+ LGIWQTLFMVTGAKL+K L+
Sbjct: 5 PGRKNASPRDLMNGGVLQCVEAATLGMPFEVWKTRMGRYRRETTLEAFRNVMKEGGGIAAFWAGTGPKMVESATKGAILLYSKEAIANSLLSMGVGEGLTGFAAGAGGGVCQVVVMGPCTFLVTAAVT-GDKSITTSQRISNVFAARGIKGFYPGGTAIAFRQATNWASRQGFTEIVRGRFKLWFH-GDKNARLTVPQEAASGIIGGALACWNHPFEVARIQMQSAADRGEPQQNMMQVFRTVIKEQGYPGLFKGIIPRLGLGIWQTLFMVTGAKLVKQALSK 285 The following BLAST results are available for this feature:
BLAST of EWM26580.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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