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Properties
| Property Name | Value |
|---|
| Product | CS-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100003g90.1797.mrna |
| Orig protein id | gnl|cribi|Naga_100003g90.1797 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:979305..980817 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna395 ID=rna395|Name=rna395|organism=Nannochloropsis gaditana|type=mRNA|length=2023bp
CCACTCTCACCCTTTTTTTCGCAACAGGAAATGCTCAAGCAGCAGAAGCG
GGGTCACATGTCGTGTTGCCTGCCCGGATGTGTGAGCAGGCGTTTAATTT
GTCTCCTGGTCTCTTCCACAGTGCTGGGAGCGGCCGGGTACTTTGGCACT
TCTGCCAGCCTCCGACAACGGCATGCCCCCGACTTCGCGGGCTTTCAAGG
CACAAAGAGGCTTTTGTCTTCTCCAAACCATAAAATAGTGACCTCAATCG
GAGCTGCGATCACTTCTATTGAAAAGATGGCTGGAAATGGCGAGGATGGT
AAAAAGACGGGCAGAGCATCTGGAGATGTGCGCAGTGGCAGGATTCTGCA
AGTCATCACCGACATCGACGACACGGTCAAGTCCAGTGGCGGATTGAGGT
TGATGGGGATGGCTCTCGGAGGGATCGACACGCAATACAAGCGCGGACAG
TACTATCCCGGCGCCTTTCAATTTGCCCTGGAGCTCTCGCGCTTCGGCGT
CCCCGAGGGCCGGGAGCCTGCCCGCGTCGCCGTCCTGACCGCCAGAGCCC
GCGAGTTCAAATTTGCCCTGGAGCTCAAGCCTTCGCACAAAGTCTGCCGC
ACGTACGCAGCAGCAGGAGCAAACAACGGGGTGGAGGGCTGGGGTGTAGG
CACAGTATTGTACGGGAGCGTGAAAGAGTGGGTGTGCCAGTCCCGCAAAG
GGCTGCGGAAGTTCCGCAACTTCGAGGCCCTGCGCGCCCAGGACCGCCTG
GACCGGACCGACTACGTGTTCGTGGGGGACACGGGGGAGCTGGATCTGCA
AGCAGGGGAGAGCATGATTCGGAAGTATCCCTCGCGGATTAAGGCGCTTT
TCATGCACTACGTCTCGGAAAGTCGTCCCTCGCCGCCTCCTCCCCGCGAC
CGGACCCTCCTCGACGTCCCTGTCATTTACTTCCGGACCTATGTTGGCGC
CGCAGTGAAAGCCGCCGAGTTGGGCTTGCTGGGCCCTTCGGGGGTGGAGG
CGGTGGTGGCTCGCACGCTGGAGGAAATTGAGGGCGGCGGGTCGGCGACG
GGGGAGGGGAAAGGTAGGAGAAAGAGGAAGGCGACGGCGGAGCAAGTGGC
GGAGGTGATGGCCGACATAGCCCTGGCAGAGGCGTTCATGGGGAGAAGCA
AAGCGGGAAAGGAAGGAAGGAAGCAGCGACGCGGGGAGGAAGCCCTTGAG
CTGGTTCGCGAACTCTTCCGGCCGCCAGACACTCGCTTGCCAGCCCGTGT
CTCCGTTCGTAGGTGACGAGGTCGTGCAGGCGTGTCGCAGGACCTCGAGC
CGCCGGGGCTCGGTGGAGTCGCTGGGAGTTCGGTCAGCGGGTGCCGAGCT
TCCGGGTCGCTTTTGGAGCAAGCAAAGGGGGCGGAAAGGACGGCTAGTGG
TGTAAAGAAGTGTCGATACAGGATGTATATATCACAGCGCACACACGAGG
GGATACCATTCTACCTCCTGTAAGGTTGGCCTGCCCGACAGATAGCTAGA
CAGTGTTTGCTTTTACTCAAGTTCAGTTATTAAGGCCCAGAGCAGAGACT
GAGCCCATGGTTCGCATGTACTCATACATAAGACTAGGCCAAAGACCTCG
TCTGATATATACATTCACATACATGCAGAGGAGAAAAAGAAAAAGTGATC
GAGGGGCACCTGCACGCGTATCCGTACTTGCCTGCCTGGCGACAATGGTT
GTACCCTCCCTACTCACATAGACGCGAAGGGGTTAACATTGGTGTTGATA
CTACTTTTATAGCTCTGGCCAGAAAGATCGTTTAAGCAAGCCTGCGGATC
GAGGCAGCCGAACCATTCCCTCAACTCCGCACAGCATACAGTTGTCCACG
TCGATGCACAGCGTGTGCATTTTGCAGGCATCTGACTACGTGGTCACAAA
ATTGGGTATTTTAGCTATCTCCCTATACTCTCGAAACCAATCGTCCTACA
CTAGGGGATGGCATTGCATCAAACCGCCCGCGGATGTAACGCCCGTGAAG
CTTGCAATCGCCATTGCGCTCGA back to topprotein sequence of rna395 >rna395-protein ID=rna395-protein|Name=rna395|organism=Nannochloropsis gaditana|type=polypeptide|length=214bp
MEEQNGVQRQSNSAHDPATPSLAPSSSSSWPRQHTSWESSTSESSSTTSY
PTACSVITPKGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASML
RCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKA
KKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGA
VPDPETFLGGVKYN back to topmRNA from alignment at CM002455.1:979305..980817+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna395 ID=rna395|Name=rna395|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp|location=Sequence derived from alignment at CM002455.1:979305..980817+ (Nannochloropsis gaditana)
AAAGCGACAGGCACTCCTGGCAATCAACGACGAAGAAAAGTTGTTGGCAA
AGATGTCTCAACATGTCAAGAGTCCTtaccctttcccgcctcgtCGCGAG
AAACATtgcccgccgccttccttcttgtgcAGGGAACAAACTCGCTTGTC
TTGTCCGCCCGATTCCACGTCTCCATGGCACGTTTACATCAATCAACATA
CGTGCAACGGTCTCACACTTTTCATGATGAACAAAGCGTagggcatggag
gagcaAAATGGAGTACAGAGACAGTCGAATTCGGCACACGACCCTGCTAC
TCCGTccttggccccctcctcctcctcgtcctggcCTCGACAACACACCA
GTTGGGAGAGTAGCACGAGTGAAAGCTCATCCACGACATCTTACCCCACG
GCATGCTCAGTCATTACACCcaaaggcaaagaaggcCGGCTCAAGTTTGA
GTACGACGGGCGGACCATATATGAGTGGGAGCAGACCCTGGAAGACGTGA
GCATCTTCGTCACCCCTCCATCGGGGGTCAAAGCCTCCATGCTCCGGTGT
ACCATCGCTTCTTCGCATCTGACGTTAGGGCTGAAAGAAGCAGGGCACCC
TTTCATTGATGAGGCAACTGGCGGATCCGTAAAAGCGGCTGAAAGCTTTT
GGACACTGGAGGACGGTGAGCTGCACGTATTGCTTCAAAAagcaaagaaa
ggggaggtgtGGCCGAGCGCTCTGGCAGGCCGGGGCTCGTTGGACCCCGT
GACGAGCGAGAGTGTGCGAAAGCAACTCATGCTTGAGCGCTTTCAAGAGG
AGAACCCTGGCTTTGACTTCTCGAACGCCGAATTCAATGGCGCGGTGCCC
GATCCAGAGACGTTTTTAGGCGGAGTAAAATACAATTGAAGACAAAAACG
ACACGCACGAAATAACCTTAAGCATGGAAGTAAAAACAACAAGCATGCTT
TGTTCCCGCACTCTCATTCAAATGTGTTTACATCACGGTGCACACATCTG
GCGTGGCGTATAGAGACTTTGCCGGCCACCACAAGATGACCTACCCTACA
CTCATGCCCTCTAACGGACAGTTAATCGACATTCGCCCCTGTTTCTATCG
TACCAGTATAGATATATTATCATGGGTCCGacgtccattcctcctcccgg
aacACACGCGGAGTCAACCCTAATTCACATTTTCTCACCATCCCACTGAG
CGTGCTCCTCACGTCTCCAAGTAGCACAGCTGGCGGACCCTCCTCTACGC
ATCTGCCTCGCTCCATGACAAGTACGCGGTCGAAGTCTTGGATGTGCTGC
AGGCGATGGCAGATCCAGAGGACCGTGCAGGGCAGGGACAGGATGATTTT
GTGGATGATGGCGTCCGTTTTCAGATCGATAGCCGAGGTGACCTCATCAC
AGAGCATTACCGGAGCCAAGTGGAGAAGAGCGCGTGCAATGCATAGCAGC
TGCCGCTCCCCCTCGGAGAATTCTAAGGTCCTTAAGCGCGTGTCAAGCCC
CCGAGGCAAGGCC back to topCoding sequence (CDS) from alignment at CM002455.1:979305..980817+ >rna395 ID=rna395|Name=rna395|organism=Nannochloropsis gaditana|type=CDS|length=645bp|location=Sequence derived from alignment at CM002455.1:979305..980817+ (Nannochloropsis gaditana)
atggaggagcaAAATGGAGTACAGAGACAGTCGAATTCGGCACACGACCC
TGCTACTCCGTccttggccccctcctcctcctcgtcctggcCTCGACAAC
ACACCAGTTGGGAGAGTAGCACGAGTGAAAGCTCATCCACGACATCTTAC
CCCACGGCATGCTCAGTCATTACACCcaaaggcaaagaaggcCGGCTCAA
GTTTGAGTACGACGGGCGGACCATATATGAGTGGGAGCAGACCCTGGAAG
ACGTGAGCATCTTCGTCACCCCTCCATCGGGGGTCAAAGCCTCCATGCTC
CGGTGTACCATCGCTTCTTCGCATCTGACGTTAGGGCTGAAAGAAGCAGG
GCACCCTTTCATTGATGAGGCAACTGGCGGATCCGTAAAAGCGGCTGAAA
GCTTTTGGACACTGGAGGACGGTGAGCTGCACGTATTGCTTCAAAAagca
aagaaaggggaggtgtGGCCGAGCGCTCTGGCAGGCCGGGGCTCGTTGGA
CCCCGTGACGAGCGAGAGTGTGCGAAAGCAACTCATGCTTGAGCGCTTTC
AAGAGGAGAACCCTGGCTTTGACTTCTCGAACGCCGAATTCAATGGCGCG
GTGCCCGATCCAGAGACGTTTTTAGGCGGAGTAAAATACAATTGA back to top
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