EWM30280.1, cds395 (CDS) Nannochloropsis gaditana

Overview
NameEWM30280.1
Unique Namecds395
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:979549..980193 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30280.1
ProductCS-like domain protein
Orig transcript idgnl|cribi|Naga_100003g90.1797.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:979549..980193 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
Homology
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|585112939|gb|EWM30280.1| (CS-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 440.269 bits (1131), Expect = 1.881e-156
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:    1 MEEQNGVQRQSNSAHDPATPSLAPSSSSSWPRQHTSWESSTSESSSTTSYPTACSVITPKGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKYN 214
            MEEQNGVQRQSNSAHDPATPSLAPSSSSSWPRQHTSWESSTSESSSTTSYPTACSVITPKGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKYN
Sbjct:    1 MEEQNGVQRQSNSAHDPATPSLAPSSSSSWPRQHTSWESSTSESSSTTSYPTACSVITPKGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKYN 214          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|676379009|ref|XP_009032783.1| (hypothetical protein AURANDRAFT_18373 [Aureococcus anophagefferens] >gi|323457324|gb|EGB13190.1| hypothetical protein AURANDRAFT_18373 [Aureococcus anophagefferens])

HSP 1 Score: 206.838 bits (525), Expect = 1.093e-64
Identity = 94/158 (59.49%), Postives = 120/158 (75.95%), Query Frame = 0
Query:   57 ITPKGKE-GRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            +TPKG E GR +F+++GR IYEW+Q+LEDV+I++TPP GV   M+ CTI+ +HL LGL+    PF+DEATGG V   ES W + DGEL VL  K +KGE W  ALA RG +DP T + +++++MLERFQEENPGFDF +AEFNG VPDP  F+GGVKY
Sbjct:   13 LTPKGSEKGRYQFKHEGRVIYEWDQSLEDVNIYITPPPGVVPDMIDCTISPNHLRLGLR-GNPPFLDEATGGPVVVKESHWYMNDGELTVLFAKMRKGETWDGALATRGKVDPFTRQEIQREMMLERFQEENPGFDFRSAEFNGQVPDPRAFMGGVKY 169          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|301119787|ref|XP_002907621.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106133|gb|EEY64185.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 202.986 bits (515), Expect = 1.875e-63
Identity = 87/149 (58.39%), Postives = 114/149 (76.51%), Query Frame = 0
Query:   65 RLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            R  F++DGR IYEWEQ++E+V+IF+ PP GV A  ++C IA++H+TLGL+ A   F++     SV  AES+W L+ GEL++ LQK KKG +WPS   G G LDP+  E+ ++Q+MLERFQEENPGFDFSNAEFNG+ PDP TF+GGVKY
Sbjct:    7 RRIFKHDGRAIYEWEQSMEEVNIFIKPPPGVTAQQIQCDIATNHVTLGLRGAADKFLNHDLASSVVVAESYWMLDSGELNINLQKMKKGFIWPSVFVGHGELDPMQQEATKQQMMLERFQEENPGFDFSNAEFNGSAPDPRTFMGGVKY 155          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|695381720|ref|XP_009517177.1| (hypothetical protein PHYSODRAFT_472297 [Phytophthora sojae] >gi|348690088|gb|EGZ29902.1| hypothetical protein PHYSODRAFT_472297 [Phytophthora sojae])

HSP 1 Score: 201.83 bits (512), Expect = 6.446e-63
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 0
Query:   65 RLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            R  F++DGR IYEWEQ++E+V++F+ PP GV A  ++C IA++H+TLGL+     F++     SV  AES+W L+ GEL++ LQK KKG +WPS   G G LDP+  E+ ++Q+MLERFQEENPGFDFSNAEFNGA PDP TF+GGVKY
Sbjct:    7 RRVFKHDGRVIYEWEQSMEEVNVFIKPPPGVTAQQIQCDIAANHVTLGLRGVTDKFLNHDLASSVVVAESYWMLDSGELNINLQKMKKGFIWPSVFVGHGELDPMQQEATKQQMMLERFQEENPGFDFSNAEFNGAAPDPRTFMGGVKY 155          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|675176785|ref|XP_008897277.1| (hypothetical protein PPTG_05479 [Phytophthora parasitica INRA-310] >gi|566011125|gb|ETI34036.1| hypothetical protein F443_19392 [Phytophthora parasitica P1569] >gi|567948652|gb|ETK74395.1| hypothetical protein L915_18814 [Phytophthora parasitica] >gi|567977320|gb|ETL27825.1| hypothetical protein L916_18710 [Phytophthora parasitica] >gi|568006825|gb|ETL81073.1| hypothetical protein L917_18536 [Phytophthora parasitica] >gi|568036662|gb|ETM34266.1| hypothetical protein L914_18628 [Phytophthora parasitica] >gi|568103080|gb|ETN17751.1| hypothetical protein PPTG_05479 [Phytophthora parasitica INRA-310] >gi|570938667|gb|ETP03924.1| hypothetical protein F441_19213 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 200.675 bits (509), Expect = 1.385e-62
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0
Query:   65 RLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            R  F++DGR IYEWEQ++E+V+IF+ PP GV A  ++C I ++H+TLGL+ A   F++     SV  AES+W  + GEL++ LQK KKG +WPS   G G LDP+  E+ ++Q+MLERFQEENPGFDFSNAEFNGA PDP TF+GGVKY
Sbjct:    7 RRVFKHDGRVIYEWEQSMEEVNIFIKPPPGVTAQQIQCDITTNHVTLGLRGATDKFLNHDLASSVVVAESYWMFDSGELNINLQKMKKGFIWPSVFVGHGELDPMQQEATKQQMMLERFQEENPGFDFSNAEFNGAAPDPRTFMGGVKY 155          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|570314892|gb|ETO62840.1| (hypothetical protein F444_19340 [Phytophthora parasitica P1976] >gi|570968959|gb|ETP32078.1| hypothetical protein F442_19163 [Phytophthora parasitica P10297])

HSP 1 Score: 201.06 bits (510), Expect = 1.461e-62
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0
Query:   65 RLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            R  F++DGR IYEWEQ++E+V+IF+ PP GV A  ++C I ++H+TLGL+ A   F++     SV  AES+W  + GEL++ LQK KKG +WPS   G G LDP+  E+ ++Q+MLERFQEENPGFDFSNAEFNGA PDP TF+GGVKY
Sbjct:    7 RRVFKHDGRVIYEWEQSMEEVNIFIKPPPGVTAQQIQCDITTNHVTLGLRGATDKFLNHDLASSVVVAESYWMFDSGELNINLQKMKKGFIWPSVFVGHGELDPMQQEATKQQMMLERFQEENPGFDFSNAEFNGAAPDPRTFMGGVKY 155          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|1214709418|gb|OWZ20600.1| (hypothetical protein PHMEG_0004956 [Phytophthora megakarya])

HSP 1 Score: 199.134 bits (505), Expect = 6.392e-62
Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 0
Query:   65 RLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            R  F++DGR IYEWEQ++E+V++F+ PP  V A  L+C I+++H+TLGL+     F++     SV  AES+W L+ GEL++ LQK KKG +WPS   G G LDP+  E+ ++Q+MLERFQEENPGFDFSNAEFNGA PDP TF+GGVKY
Sbjct:    7 RRVFKHDGRVIYEWEQSMEEVNVFIKPPPNVTAQHLQCNISTNHVTLGLRGVADKFLNHDLTSSVVVAESYWMLDSGELNINLQKMKKGFIWPSVFIGHGELDPMQQEATKQQMMLERFQEENPGFDFSNAEFNGAAPDPRTFMGGVKY 155          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|299469845|emb|CBN76699.1| (nuclear movement domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 201.83 bits (512), Expect = 9.849e-62
Identity = 92/155 (59.35%), Postives = 119/155 (76.77%), Query Frame = 0
Query:   60 KGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGS-LDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
            KGKEGR+KFE++GRT+YEWEQ+LE+V++++  P GVKA  + C I   H+ LGLK    PFIDE TGG V   ES+W ++ GEL+V LQK KK + WP+AL GR + +DP+T E ++K++MLERFQ ENPGFDFS AEFNG VPD  +F+GGVKY
Sbjct:   92 KGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRIECKITPRHICLGLK-GNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARSFMGGVKY 245          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|1173935041|gb|OQR86227.1| (hypothetical protein ACHHYP_10823 [Achlya hypogyna])

HSP 1 Score: 192.2 bits (487), Expect = 3.966e-59
Identity = 84/156 (53.85%), Postives = 111/156 (71.15%), Query Frame = 0
Query:   59 PKGKEGRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKYN 214
            P    GR  F++ G+ IYEWEQ+LE+V++F+ PP G+ A  L C IA+SHL+LG+K     ++D      V  AES+W L+DGEL + LQK KKG  W +   G G LDP+T + V+K+L+LERFQ+ENPGFDFSNAEFNG+ PD  TF+GGV+YN
Sbjct:    5 PAVNAGRRAFKHQGQVIYEWEQSLEEVNVFIKPPPGISAGHLVCNIAASHLSLGIKGNAERYLDHELTSQVVVAESYWMLDDGELTINLQKMKKGLTWEAVFVGHGELDPLTKDEVQKKLLLERFQQENPGFDFSNAEFNGSAPDARTFMGGVRYN 160          
BLAST of EWM30280.1 vs. NCBI_GenBank
Match: gi|669147094|ref|XP_008609109.1| (hypothetical protein SDRG_05185 [Saprolegnia diclina VS20] >gi|530739347|gb|EQC37589.1| hypothetical protein SDRG_05185 [Saprolegnia diclina VS20])

HSP 1 Score: 191.43 bits (485), Expect = 8.521e-59
Identity = 85/151 (56.29%), Postives = 110/151 (72.85%), Query Frame = 0
Query:   64 GRLKFEYDGRTIYEWEQTLEDVSIFVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGSLDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKYN 214
            GR  F++ G+ IYEWEQ+LE+V+IF+ PP GV AS L CTIA SH+ LG+K     ++D      V  AES+W L+ GEL++ LQK KKG  W +   G G LDP+T + V+K+L+LERFQ+ENPGFDFSNAEFNG+ PD  TF+GGV+YN
Sbjct:    9 GRRAFKHQGQVIYEWEQSLEEVNIFIKPPPGVTASHLLCTIAPSHVMLGIKGNAERYLDHELTSQVVVAESYWMLDGGELNINLQKMKKGLTWDAVFVGHGELDPLTKDEVQKKLLLERFQQENPGFDFSNAEFNGSAPDARTFMGGVRYN 159          
The following BLAST results are available for this feature:
BLAST of EWM30280.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112939|gb|EWM30280.1|1.881e-156100.00CS-like domain protein [Nannochloropsis gaditana][more]
gi|676379009|ref|XP_009032783.1|1.093e-6459.49hypothetical protein AURANDRAFT_18373 [Aureococcus... [more]
gi|301119787|ref|XP_002907621.1|1.875e-6358.39conserved hypothetical protein [Phytophthora infes... [more]
gi|695381720|ref|XP_009517177.1|6.446e-6357.72hypothetical protein PHYSODRAFT_472297 [Phytophtho... [more]
gi|675176785|ref|XP_008897277.1|1.385e-6257.72hypothetical protein PPTG_05479 [Phytophthora para... [more]
gi|570314892|gb|ETO62840.1|1.461e-6257.72hypothetical protein F444_19340 [Phytophthora para... [more]
gi|1214709418|gb|OWZ20600.1|6.392e-6257.05hypothetical protein PHMEG_0004956 [Phytophthora m... [more]
gi|299469845|emb|CBN76699.1|9.849e-6259.35nuclear movement domain-containing protein [Ectoca... [more]
gi|1173935041|gb|OQR86227.1|3.966e-5953.85hypothetical protein ACHHYP_10823 [Achlya hypogyna... [more]
gi|669147094|ref|XP_008609109.1|8.521e-5956.29hypothetical protein SDRG_05185 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna395rna395Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications