rna3934, rna3934 (mRNA) Nannochloropsis gaditana

Overview
Namerna3934
Unique Namerna3934
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length765
Alignment locationCM002462.1:448577..450363 -

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Properties
Property NameValue
Productnucleoside diphosphate kinase
Orig transcript idgnl|cribi|Naga_100001g189.8275.mrna
Orig protein idgnl|cribi|Naga_100001g189.8275
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:448577..450363 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100001g189gene3785Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3934rna3934-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26764.1cds3925Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3934 ID=rna3934|Name=rna3934|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGGAAGAGGAATGGAAACCCTTGCCCAGGAGAGGAACAAAGAAAAGACG
GCGTGTCAGGCCTGAAAATGGCGGGGAGGGTGCTCCATGCCAAGATACTC
AAGAGGGGCATGTGAAAGCGACATGTCTGGGAGAATCTGGCCAGCCGCCC
CAGAAACCACTAGACACATCGCAAATGCAACAAGTTACGGCCGCGGTAAG
ACGAAGAGCAGCAGAGCATCGGCCAGAACGTGGAGAGGACATGGGTAATG
ATGGTGTGGCCGGCGAGTTCTACGAATATCTAGACCATACAGCGGACGTG
CAGCTACACGCGTGGGGGAAGGACCTCACGCATGCATTCGAGAACATTGT
ACCATGCATGCTCAACTACATGACAGATCTGTCGAAGGTGGACGTGGACC
CTTCGCAGACGCAGACTTTCGAGGTGGAGGGCCATGATCTCTCGTCCTTG
TTATTTGCCTGGTTGGACGAGTTCCTGTTTCGCTTTAGCTCCGAGGCATT
CGTGTGCAAGGAGGCAAAAATATTGGAGTTTGTGCGTCCTTTAGAAAACG
CAAACACATCTTCGAAAAGTACCGGGGGGGCAGTCGGGAAATTGAACGAG
GGGGAGAGGCAAGGGAAGTATACCATCAAGGTACAAGCGGAGGGAGAGAC
ATTCACTCTGACCAAGCACCCGCAGGGAACTGAGGTAAAAGCAATCACGT
ATTCAGCCATGCAAATCCACGAGAACGAGGGACGTGCAGACCTATACGTG
ATAATAGACATATAA
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protein sequence of rna3934

>rna3934-protein ID=rna3934-protein|Name=rna3934|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MFATTMTRCLRRAAGIRAFSSSMGRTTAFTAKRASYRVLGGLALFAAGTV
WAAQGAHFDTPTLCSAGKAPFTGVPGTDKERTFIAIKPDGVQRGLIAAII
ARFENKGFKLVALKMLWPTKEKAESHYADLATKPFFKGLVAYFSSGPIVA
MVWEGKDAIKTGRVLLGATNPAAAVPGTIRGDLAISVGRNICHGSDGPES
AVHEIANWFTPEEVSDYPRSLDEWIVSDN
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mRNA from alignment at CM002462.1:448577..450363-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3934 ID=rna3934|Name=rna3934|organism=Nannochloropsis gaditana|type=mRNA|length=1787bp|location=Sequence derived from alignment at CM002462.1:448577..450363- (Nannochloropsis gaditana)
GACCTGAATGGAAGTAGCTTGGCCGGCGAGCAAAAGAAAGTGACCGAGAC
CGTCCACTCCCAGCGGCCTGCTAGCTTTTGGCGAACCATGCTTCTCCCAC
GCGTCCTCGCATGTTTTATTGCGGAGGTGAGCCAACTGCAGGGGCAATAT
TTCCTTCACGCGAGCAAACAGCTATTATGATGTTGATGAGTGGACAATCT
GGATTACTAACACTTCCTTTCATGTCTACTACGTGGTACATGTAACGCCC
GACCAACCTCCCCCCCTCTCGGCGTGTTTACAGGACCAGACGCAATAGAT
CATAGAGCCCCACCGCTAGAATTACACCCACCATGTTTGCCACCACGATG
ACCCGTTGTCTGCGACGGGCTGCTGGAATTCGCGCCTTCTCATCCTCCAT
GTGAGTGAGAAGATAGGAAACGTGGATATACCCAAGGATCATGAAGCAAG
ATGCAGATGTGTGTTCGACATTAAAAATGCAAAACTCTATAGGCAGGGAC
TTATCTGCACGATCAATTTTTTTACAAGTCTCATCCTTCATGTCAAATGC
AGCCCTTTGTCTGATCCCAGCTCCCACACACAAATAGGGGAAGGACTACA
GCCTTCACTGCGAAGCGCGCTTCCTACCGCGTGCTTGGTGGCCTAGCCCT
CTTCGCGGCGGGGACTGTCTGGGCCGCTCAGGGGGCTCACTTTGATACCC
CCACGCTCTGCTCAGCTGGCAAGGCGCCCTTCACAGGCGTACCGGGGACC
GATAAGGTGCGCTTCTACGGGTTTCATGCTCTCGATACCCTGTGAGAGCT
TCTTTGCGGAATTGTCACGACCTGACGCCCATATTCTCGGTTTTAGAGTG
GTAGTGGCTTCATTGATAGGTACCATGCACTCTTTGATTTGCCCTCTTCT
ATTGCTAGGAGCGCACCTTCATCGCCATCAAGCCTGATGGTGTGCAGCGG
GGCTTGATCGCGGCCATCATTGCTCGCTTTGAGAACAAAGGCTTCAAGCT
GGTGGCGTTAAAAATGCTGTGGCCCACAAAGGAGAAGGCAGAAAGCCACT
ATGCTGATCTAGCCACCAAGCCCTTCTTTAAGGTACGGAGGCGGTTTCTG
GTATCCGCTCGTGTTAAGAAAGCTTCCTTCGTGAGCTTCACTCGGCACGG
ACACCCGCCTGCCGTCGCGCTCACCCCCTGTCTCTCTGCCCTCCGATCCC
TTCCTACAGGGGCTCGTTGCCTACTTCTCCTCCGGCCCCATCGTGGCCAT
GGTCTGGGAGGGCAAGGACGCCATCAAGACCGGCCGCGTCCTCCTCGGGG
CCACCAACCCCGCCGCCGCCGTCCCGGGGACCATCCGCGGGGACCTGGCC
ATCAGCGTGGGCCGCAACATCTGTCACGGCTCGGACGGTCCCGAGTCGGC
CGTGCACGAAATCGCGAACTGGTTCACGCCCGAGGAGGTTTCGGACTACC
CGCGCAGCCTGGACGAATGGATCGTGTCCGACAACTAGGGGGGGCAGAGA
GAGAAGAAGGCGCGCTTGCGCGTACACCTTGCCTAGTGGGGCGATCAGTG
GCTAGGCCGGTTCGCATGCAGTACCCTGGTGCGCGCTCTGGAACGTATAG
GGAGGAGGATAGGGTGGCAGCGAGGTGGCGGGACCCTTTGGAATGGAAAA
GGTGGGACAAAAACGGGGATGACCGTTTGTGTGTTTCAAGGCCCCTTCCT
GCTGGACTCTGCCAGACTTGCATAAGCTTCAAACCAGAAAAAATGCAGTA
GCATCGAAAAAGTTCAGACCCACACCGCCTTCCCTGC
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Coding sequence (CDS) from alignment at CM002462.1:448577..450363-

>rna3934 ID=rna3934|Name=rna3934|organism=Nannochloropsis gaditana|type=CDS|length=2760bp|location=Sequence derived from alignment at CM002462.1:448577..450363- (Nannochloropsis gaditana)
GGGCTCGTTGCCTACTTCTCCTCCGGCCCCATCGTGGCCATGGTCTGGGA
GGGCAAGGACGCCATCAAGACCGGCCGCGTCCTCCTCGGGGCCACCAACC
CCGCCGCCGCCGTCCCGGGGACCATCCGCGGGGACCTGGCCATCAGCGTG
GGCCGCAACATCTGTCACGGCTCGGACGGTCCCGAGTCGGCCGTGCACGA
AATCGCGAACTGGTTCACGCCCGAGGAGGTTTCGGACTACCCGCGCAGCC
TGGACGAATGGATCGTGTCCGACAACTAGGAGCGCACCTTCATCGCCATC
AAGCCTGATGGTGTGCAGCGGGGCTTGATCGCGGCCATCATTGCTCGCTT
TGAGAACAAAGGCTTCAAGCTGGTGGCGTTAAAAATGCTGTGGCCCACAA
AGGAGAAGGCAGAAAGCCACTATGCTGATCTAGCCACCAAGCCCTTCTTT
AAGGGGAAGGACTACAGCCTTCACTGCGAAGCGCGCTTCCTACCGCGTGC
TTGGTGGCCTAGCCCTCTTCGCGGCGGGGACTGTCTGGGCCGCTCAGGGG
GCTCACTTTGATACCCCCACGCTCTGCTCAGCTGGCAAGGCGCCCTTCAC
AGGCGTACCGGGGACCGATAAGATGTTTGCCACCACGATGACCCGTTGTC
TGCGACGGGCTGCTGGAATTCGCGCCTTCTCATCCTCCATGGGCTCGTTG
CCTACTTCTCCTCCGGCCCCATCGTGGCCATGGTCTGGGAGGGCAAGGAC
GCCATCAAGACCGGCCGCGTCCTCCTCGGGGCCACCAACCCCGCCGCCGC
CGTCCCGGGGACCATCCGCGGGGACCTGGCCATCAGCGTGGGCCGCAACA
TCTGTCACGGCTCGGACGGTCCCGAGTCGGCCGTGCACGAAATCGCGAAC
TGGTTCACGCCCGAGGAGGTTTCGGACTACCCGCGCAGCCTGGACGAATG
GATCGTGTCCGACAACTAGGAGCGCACCTTCATCGCCATCAAGCCTGATG
GTGTGCAGCGGGGCTTGATCGCGGCCATCATTGCTCGCTTTGAGAACAAA
GGCTTCAAGCTGGTGGCGTTAAAAATGCTGTGGCCCACAAAGGAGAAGGC
AGAAAGCCACTATGCTGATCTAGCCACCAAGCCCTTCTTTAAGGGGAAGG
ACTACAGCCTTCACTGCGAAGCGCGCTTCCTACCGCGTGCTTGGTGGCCT
AGCCCTCTTCGCGGCGGGGACTGTCTGGGCCGCTCAGGGGGCTCACTTTG
ATACCCCCACGCTCTGCTCAGCTGGCAAGGCGCCCTTCACAGGCGTACCG
GGGACCGATAAGATGTTTGCCACCACGATGACCCGTTGTCTGCGACGGGC
TGCTGGAATTCGCGCCTTCTCATCCTCCATGGGCTCGTTGCCTACTTCTC
CTCCGGCCCCATCGTGGCCATGGTCTGGGAGGGCAAGGACGCCATCAAGA
CCGGCCGCGTCCTCCTCGGGGCCACCAACCCCGCCGCCGCCGTCCCGGGG
ACCATCCGCGGGGACCTGGCCATCAGCGTGGGCCGCAACATCTGTCACGG
CTCGGACGGTCCCGAGTCGGCCGTGCACGAAATCGCGAACTGGTTCACGC
CCGAGGAGGTTTCGGACTACCCGCGCAGCCTGGACGAATGGATCGTGTCC
GACAACTAGGAGCGCACCTTCATCGCCATCAAGCCTGATGGTGTGCAGCG
GGGCTTGATCGCGGCCATCATTGCTCGCTTTGAGAACAAAGGCTTCAAGC
TGGTGGCGTTAAAAATGCTGTGGCCCACAAAGGAGAAGGCAGAAAGCCAC
TATGCTGATCTAGCCACCAAGCCCTTCTTTAAGGGGAAGGACTACAGCCT
TCACTGCGAAGCGCGCTTCCTACCGCGTGCTTGGTGGCCTAGCCCTCTTC
GCGGCGGGGACTGTCTGGGCCGCTCAGGGGGCTCACTTTGATACCCCCAC
GCTCTGCTCAGCTGGCAAGGCGCCCTTCACAGGCGTACCGGGGACCGATA
AGATGTTTGCCACCACGATGACCCGTTGTCTGCGACGGGCTGCTGGAATT
CGCGCCTTCTCATCCTCCATGGGCTCGTTGCCTACTTCTCCTCCGGCCCC
ATCGTGGCCATGGTCTGGGAGGGCAAGGACGCCATCAAGACCGGCCGCGT
CCTCCTCGGGGCCACCAACCCCGCCGCCGCCGTCCCGGGGACCATCCGCG
GGGACCTGGCCATCAGCGTGGGCCGCAACATCTGTCACGGCTCGGACGGT
CCCGAGTCGGCCGTGCACGAAATCGCGAACTGGTTCACGCCCGAGGAGGT
TTCGGACTACCCGCGCAGCCTGGACGAATGGATCGTGTCCGACAACTAGG
AGCGCACCTTCATCGCCATCAAGCCTGATGGTGTGCAGCGGGGCTTGATC
GCGGCCATCATTGCTCGCTTTGAGAACAAAGGCTTCAAGCTGGTGGCGTT
AAAAATGCTGTGGCCCACAAAGGAGAAGGCAGAAAGCCACTATGCTGATC
TAGCCACCAAGCCCTTCTTTAAGGGGAAGGACTACAGCCTTCACTGCGAA
GCGCGCTTCCTACCGCGTGCTTGGTGGCCTAGCCCTCTTCGCGGCGGGGA
CTGTCTGGGCCGCTCAGGGGGCTCACTTTGATACCCCCACGCTCTGCTCA
GCTGGCAAGGCGCCCTTCACAGGCGTACCGGGGACCGATAAGATGTTTGC
CACCACGATGACCCGTTGTCTGCGACGGGCTGCTGGAATTCGCGCCTTCT
CATCCTCCAT
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Synonyms
Publications