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Properties
| Property Name | Value |
|---|
| Product | solute carrier family 25 (mitochondrial carrier citrate transporter) member 1 |
| Orig transcript id | gnl|cribi|Naga_100001g193.8088.mrna |
| Orig protein id | gnl|cribi|Naga_100001g193.8088 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:442371..443953 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3931 ID=rna3931|Name=rna3931|organism=Nannochloropsis gaditana|type=mRNA|length=4574bp
TGCTTGTCGCGTGGCATTTCTGTCAGTACCACCGTATGTGAGGTCTCGCC
AGGCCACTCAGGGCGCTCGGCTGCCGCTAGGGGAGGTCGATGCCTCACTT
GGCTACCCAGACCGTAATTTCTCACCCGAGTCCCAATAAAATTTACAAAG
ATTTATTCTATACCCTTGATAACACCCTAAGATATCGCAGACGTGATTTT
GATATCGCGTTTTGAGTGCGTGTTGTTTCTAATTGTCTCTTGTACCGCCC
TCAACCACTTCAGCCTCCTCCCTTACGCAATATAGTAATAGCCTATGACA
TTCAAGGCAGGGACAGCGTCATCAAAGCAACGCAAAATCAAGAGGCACTC
TGTCTTAATTCTGGGTCTATCTCTGGCTACGCTCTCCACATCGCAAGCCT
TTCTGTCGCCCGCTCGATCTTACTCTCTGCCCCGTGCTTCAGCTTTAGGT
TTCCGAGCACCGCTCGCGCCCGCCACCGAGTCACTACACTTCGTGACGCC
ACTCAATGCCGCTGGGGCTCAGGAGATGGAGCAGCTAGTGGTTCAGCCCA
TCAGCACCTTTGAAGGAGAAATTGAACTTCCCGGAAGCAAGTCAATCAGC
AATCGCATTCTCCTCCTCTCCGCCCTGAGCCAGGGCACAACTGTCGTTGA
CAATCTGCTGCAGAGCGAGGACATTGAGTACATGATTCAAGCCCTTCTTG
ATCTAGGAATCAAGCTAGAAAAGACGGGTGAGAATCAGTGGACGGTCCAG
GGCCGAGGGGCGGCTTTCGACTCCGATAAGCCCCTAGAGCTGTACCTCGG
GAACGCTGGCACGGCCATGCGGCCCCTGACGGCCGCTTTGTGCGCGGGCC
ACGGCGACTTCACCCTGGATGGGACTCCTCGGATGCGTGAGCGCCCGATC
TCGGACCTCGTGGACGGGCTGCAGCAGCTCGGAGTCGACTTGGCCTGCTC
CCCGACGGGGTGCCCGCCCGTGACAATCCGAGCCCGAGGCCTCTCGGGGG
GTATCGTGCGCATCTCCGGCAAGATCTCCAGCCAGTATCTGTCCGCGCTG
CTGATGGCCGCGCCCCTCGCCCGCGGGGACGTGAGGATCGAGATAACGGA
CGAGCTGGTCTCGGCGCCCTACGTGCACATGACGGTCAAGTTGATGGCCC
GCTTTGGGGTGGAGGTGGACAACGAGGGGGATGGGGTCTTCACGGTCCGA
GGGGGGCAGACGTATCGGTCACCCGGGCAGATTTTCACGGAGGGAGACGC
CTCCTCGGCTTCGTACTTCCTGGCTGGCGCGGCCATCACGGGGGGCCGGG
TCACGGTCCGGGGCTGCGGCTCCGAGAGCGTGCAGGGGGACGTGTATTTC
GCGACCGTCCTGGGCGAGATGGGGGCCACGGTGGAGTGGACGCCCACCTC
GATACAAGTGACGCGGCAGCCGGGCGTGCCCCTCAAAGGCATCGACGTGG
ATTGCGGCGCCATTCCGGATGCGGCCATGACGCTGGCGGTGGTGGCGCTT
TTCGCGGAGGGGCCCACAGCCATCAGGTAGGGGTGGCTTATGCAGGGATG
TCCTCTCCCCTCTGCCTTGCCGATCCCAGATTTTCCTCACGCCTTCTTCT
TCGCGCTCTACCCTCTCCGACCACCCTCTCCAGCCACCAATCTGCCTGCG
GCCTTTATCCCCCCCTTTCTCTTGCGTCTCTCTCCCCTCACCCCCCTCGT
CTATAACTGCGCGCCTGTCCACACACGAACACACATGTCTCTCATGTCAT
CCCCCTAACCCCTCTATCCCCCTTTAGAAACGTCTACAACTGGCGCGTGA
AGGAGACGGAGCGCATGAAAGCCATCGTCACCGAACTCACGAAGCTGGGC
GCCAGCGTGGAGGAGGGCCCGGACTTCTGCATCGTGCATCCCTTGAAGGA
CGTGAGGCCGGGCGTGGCTATCGACACCTACGACGACCACCGCATGGCGA
TGTGTTTCTCCCTCGCGGCCTGTGCCGGGGTCCCTGTCAAAATCAACGAC
CCCAAGTGCGTGCGGAAGACCTTCCCGGACTACTTCGACCGACTGGCCCT
CATGAGCAAGTAGCGGTCAAGGAGGCGGGCGCTGCCGCGTGGCGTCCTGG
ATGCACTGAGAGAGAGCTAGAAGGCAGCTATAAATTAAAGCACTGAAGAG
ACGACTCAAAGAAAAGCTACCAGCCGCCTACGTGTCGGAGGCGCTCAAGT
CTCATAGCACCCTTAATCGTCAAAATTCATTAGCGTCCTCTGCTTCCGAG
CTCAGTCTATCCAACGCCCTACATCCCACCCGCAACTCAATCGCCCTGCT
TCCGTCGCGAATGCACACCCCTCCAAGAATGCCCCCCTAGCCGCCAACCA
TCATGTCTGGGGTTGAGCATCGCCTTCCCTCCTCTGCACCCATCCAACAA
GCGGCGGCCCTAGGTCTATTGGCCAGAATCTCGCCGAGCGCTTGAAGGCC
GAATTATGTGATCGAAAGCGAGGTATGCCCAACGAGCATATCCGCCAAAT
ATCGTTCCAGGATGAAGGGCTTCCCAAACACCTCCCCTCCCTCTCTCCCT
TTCTTTATCCATTCTTCCTTCTCCCTACTGGGCCATGGGCACCTTGGGCG
GGTTGGTGTCCCAGACCGCATCCAGGAGCTTCACTATCTCCCCGTACATG
CTCATCGTGATGCCTACCTCCAGGCACACGCGCGTCAACCGCGGCCCCAC
CCCCTTATAAAAGCCGGCCACGCCCTCGTTCTTCAGGATCTGTCCCACGC
AGTCCCAGGTGCTCTTGTACTTGGCCGCCTCCAGGCCTTGCATCCGGCTC
TTCACCACGTCAATGCCCTGGAAAGCGAGCACGGAGATGCCCCCCGCCGT
GGCGCCAGCCGCCGCGCTTTTGATGGGGGTGTCCAGCTTGACATAGTCCT
TGATGACGCTGAAGATGCCGAAGCGCGTGGCCTGCGCGGTGGAGACCTAC
AGGAGCGAGCGAGGTGAGAGAAGGGACGGGGTGGCGGTTATCAGTGTTGT
CTCGGTCATAATTTCGCCTCAAAGGAGAGGGTCCTACCTTCAAGATGGTG
GGGAGGAGGCCGCGGTATACCCCGGAGAGCTTCTCCTCCGCCACGATGGT
CCTCACACCGTGGAAGAATCCCTGGTACTTATTAGTGCCGCGAAACTATG
CGGTGAAGAAAGACGAAAAGGGTCAGGTAAGGCTCCTATTCGGGCGTGGG
CGGGGCGCGAAGGAAAGCCCTTCCTGCGACCTAGACGGACCTGGTCGTGT
ATCAACTTGATCTTAATGGTCTCCTGCGGTGTGGTCACGAAGATTGCCTC
CATGGTTCCCGCGCCAAGCCCCGCCAGGAATCCTTTGGCTTGGCCCAGAC
CGTACTTGTCCCCTCCGTTGGCGTCAGTGAGCAGGCCCGAGAAGAACTCG
AAGGAGCTGAACCGGATTGCTGCCTTGGGTGCCGCGAAGTACAGCATGGA
GGAAAGCCCGCGGTAGAAGCCGAAAAAGCCCCGCTCTGCCATCGTCTCTG
ATATTACTTGTTTTACAGACACAGGTCTGGGGCTCAGCTGCTGCGTCGTC
TTGACATACTCTGTTGGGAACGTACTGCCCAGCGCAACGCAGAATGAGGA
TGGCGGTGAGGCACGTGATGCGCGAAAACCGGTACAGTAATCCTCACATC
AAGTTGCTGGGTGTAAACGTACCAGCAAATTTCAAAGGCCCCCGAGAGCC
CGCCTGCCAAGACCGCCTTGCCCTTGTGAGTAGGCTTATTCCCGATAGGC
GCCATGATTCGGCAGCGAAATGGTTCTGTAAGCGGATTCATAGTGTACAG
CAACATATTTATGAGTGAAAAATACACGTCAGTAGTACCATTTGCTGGTG
TGGTTATCAAAGTCTTATTCGCAACGGGCGTACGTCGTCACTAATTATAA
CAGAGTAAGGTCTGGGCCAGCGAGTAGGGTTGAGAGGGGAGGTCAGAGCG
ACACAGGGCTGACTACTCGAAAAGATACCATCAAACTCGGACCAGAGAGA
TCTTGCAACCGTATTACCATGCAGACATACTGTCGCGATCAAGACCATCA
AACACGTGAACAACCGGATGGTAGGTTCGACTGGTACGAGTACGTGTGCC
TTGTGCCACCGATCCACAGCCGGAGACGAGCGAGTTTCACGATTAAAGCT
ACTGGCTGTGAAGACTAATAAAATTTGCACAGGTATCTGAGGCCAACTCA
GCTGCGGTATTGAGGAACAAAGGGGAGGACAGGATGCAAAACGAGAAATC
TACGGCTCGTAAACGGTCTTCGATCCGGGTATGAGAAAGGAAAGGCTCAG
CTACGCATGCACTCCTTACGTCCCTTCTCTCTCATGCATCCGCCTATTCG
ACTTCTCTCGCAATGTTCCTTAAATTTAAGGTGCAACTTCGTTTCTTAAA
GCAACGTAGTTTCTTAACTCCTGTCCATTACATTGTCGCGTGCCCTAATA
CTGGGGAAGTACTATGTGGTGTTACGACCTTTACCTCAGCTACTAAACTT
AAAATGATTTGAACAAGAAGGGTGAAGATGAATGTCAGAGGCTTTTCGCA
TAAATGAAATAGTCTACGTTAAGA back to topprotein sequence of rna3931 >rna3931-protein ID=rna3931-protein|Name=rna3931|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MAPIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRPVSVKQ
VISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGD
KYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFF
HGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPI
KSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEG
VAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTNPPKVPMAQ back to topmRNA from alignment at CM002462.1:442371..443953+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3931 ID=rna3931|Name=rna3931|organism=Nannochloropsis gaditana|type=mRNA|length=1583bp|location=Sequence derived from alignment at CM002462.1:442371..443953+ (Nannochloropsis gaditana)
CTTACAGAACCATTTCGCTGCCGAATCATGGCGCCTATCGGGAATAAGCC
TACTcacaagggcaaggcggtCTTGGCAGGCGGGCTCTCGGGGGCCTTTG
AAATTTGCTGGTACGTTTACACCCAGCAACTTGATGTGAGGATTACTGTA
CCGGTTTTCGCGCATCACGTGCCTCACCGCCATCCTCATTCTGCGTTGCG
CTGGGCAGTACGTTCCCAACAGAGTATGTCAAGACGACGCAGCAGCTGAG
CCCCAGACCTGTGTCTGTAAAACAAGTAATATCAGAGACGATGGCAGAGC
GGGGCTTTTTCGGCTTCTACCGCGGgctttcctccatgctgTACTTCGCG
GCACCCAAGGCAGCAATCCGGTTCAGCTCCTTCGAGTTCTTCTCGGGCCT
GCTCACTGACGCCAACGGAGGGGACAAGTACGGTCTGGGCCAAGCCAAAG
GATTCCTGGCGGGGCTTGGCGCGGGAACCATGGAGGCAATCTTCGTGACC
ACACCGCAGGAGACCATTAAGATCAAGTTGATACACGACCAGGTCCGTCT
AGGTCGCAGGAAGGGCTTTCCTTCGCGCCCCGCCCACGCCCGAATAGGAG
CCTTACCTGACCCTTTTCGTCTTTCTTCACCGCATAGTTTCGCGGCACTA
ATAAGTACCAGGGATTCTTCCACGGTGTGAGGACCatcgtggcggaggag
aagctctCCGGGGTATaccgcggcctcctccccaccatctTGAAGGTAGG
ACCCTCTCCTTTGAGGCGAAATTATGACCGAGACAACACTGATAACCGCC
ACCCCGTCCCTTCTCTCACCTCGCTCGCTCCTGTAGGTCTCCACCGCGCA
GGCCACGCGCTTCGGCATCTTCAGCGTCATCAAGGACTATGTCAAGCTGG
ACACCCCCATCAAAAGCGCGGCGGCTGGCGCCACGGCGGGGGGCATCTCC
GTGCTCGCTTTCCAGGGCATTGACGTGGTGAAGAGCCGGATGCAAggcct
ggaggcggccaagtACAAGAGCACCTGGGACTGCGTGGGACAGATCCTGA
AGAACGAGGGCGTGGCCGGCTTTTATAAGGGGGTGGGGCCGCGGTTGACG
CGCGTGTGCCTGGAGGTAGGCATCACGATGAGCATGTACGGGGAGATAGT
GAAGCTCCTGGATGCGGTCTGGGACACCAACCCGCCCAAGGTGCCCATGG
CCCAgtagggagaaggaagaatggataaagaaagggagagagggagggga
ggtgttTGGGAAGCCCTTCATCCTGGAACGATATTTGGCGGATATGCTCG
TTGGGCATACCTCGCTTTCGATCACATAATTCGGCCTTCAAGCGCTCGGC
GAGATTCTGGCCAATAGACCTAGGGCCGCCGCTTGTTGGATgggtgcaga
ggagggaaggcgatgctCAACCCCAGACATGATGGTTGGCGGCTAGGGGG
GCATTCTTGGAGGGGTGTGCATTCGCGACGGAAGCAGGGCGATTGAGTTG
CGGGTGGGATGTAGGGCGTTGGATAGACTGAGCTCGGAAGCAGAGGACGC
TAATGAATTTTGACGATTAAGGGTGCTATGAGA back to topCoding sequence (CDS) from alignment at CM002462.1:442371..443953+ >rna3931 ID=rna3931|Name=rna3931|organism=Nannochloropsis gaditana|type=CDS|length=3588bp|location=Sequence derived from alignment at CM002462.1:442371..443953+ (Nannochloropsis gaditana)
ATGGCGCCTATCGGGAATAAGCCTACTcacaagggcaaggcggtCTTGGC
AGGCGGGCTCTCGGGGGCCTTTGAAATTTGCTGTACGTTCCCAACAGAGT
ATGTCAAGACGACGCAGCAGCTGAGCCCCAGACCTGTGTCTGTAAAACAA
GTAATATCAGAGACGATGGCAGAGCGGGGCTTTTTCGGCTTCTACCGCGG
gctttcctccatgctgTACTTCGCGGCACCCAAGGCAGCAATCCGGTTCA
GCTCCTTCGAGTTCTTCTCGGGCCTGCTCACTGACGCCAACGGAGGGGAC
AAGTACGGTCTGGGCCAAGCCAAAGGATTCCTGGCGGGGCTTGGCGCGGG
AACCATGGAGGCAATCTTCGTGACCACACCGCAGGAGACCATTAAGATCA
AGTTGATACACGACCAGTTTCGCGGCACTAATAAGTACCAGGGATTCTTC
CACGGTGTGAGGACCatcgtggcggaggagaagctctCCGGGGTATaccg
cggcctcctccccaccatctTGAAGGTCTCCACCGCGCAGGCCACGCGCT
TCGGCATCTTCAGCGTCATCAAGGACTATGTCAAGCTGGACACCCCCATC
AAAAGCGCGGCGGCTGGCGCCACGGCGGGGGGCATCTCCGTGCTCGCTTT
CCAGGGCATTGACGTGGTGAAGAGCCGGATGCAAggcctggaggcggcca
agtACAAGAGCACCTGGGACTGCGTGGGACAGATCCTGAAGAACGAGGGC
GTGGCCGGCTTTTATAAGGGGGTGGGGCCGCGGTTGACGCGCGTGTGCCT
GGAGGTAGGCATCACGATGAGCATGTACGGGGAGATAGTGAAGCTCCTGG
ATGCGGTCTGGGACACCAACCCGCCCAAGGTGCCCATGGCCCAgtagATG
GCGCCTATCGGGAATAAGCCTACTcacaagggcaaggcggtCTTGGCAGG
CGGGCTCTCGGGGGCCTTTGAAATTTGCTGTACGTTCCCAACAGAGTATG
TCAAGACGACGCAGCAGCTGAGCCCCAGACCTGTGTCTGTAAAACAAGTA
ATATCAGAGACGATGGCAGAGCGGGGCTTTTTCGGCTTCTACCGCGGgct
ttcctccatgctgTACTTCGCGGCACCCAAGGCAGCAATCCGGTTCAGCT
CCTTCGAGTTCTTCTCGGGCCTGCTCACTGACGCCAACGGAGGGGACAAG
TACGGTCTGGGCCAAGCCAAAGGATTCCTGGCGGGGCTTGGCGCGGGAAC
CATGGAGGCAATCTTCGTGACCACACCGCAGGAGACCATTAAGATCAAGT
TGATACACGACCAGTTTCGCGGCACTAATAAGTACCAGGGATTCTTCCAC
GGTGTGAGGACCatcgtggcggaggagaagctctCCGGGGTATaccgcgg
cctcctccccaccatctTGAAGGTCTCCACCGCGCAGGCCACGCGCTTCG
GCATCTTCAGCGTCATCAAGGACTATGTCAAGCTGGACACCCCCATCAAA
AGCGCGGCGGCTGGCGCCACGGCGGGGGGCATCTCCGTGCTCGCTTTCCA
GGGCATTGACGTGGTGAAGAGCCGGATGCAAggcctggaggcggccaagt
ACAAGAGCACCTGGGACTGCGTGGGACAGATCCTGAAGAACGAGGGCGTG
GCCGGCTTTTATAAGGGGGTGGGGCCGCGGTTGACGCGCGTGTGCCTGGA
GGTAGGCATCACGATGAGCATGTACGGGGAGATAGTGAAGCTCCTGGATG
CGGTCTGGGACACCAACCCGCCCAAGGTGCCCATGGCCCAgtagATGGCG
CCTATCGGGAATAAGCCTACTcacaagggcaaggcggtCTTGGCAGGCGG
GCTCTCGGGGGCCTTTGAAATTTGCTGTACGTTCCCAACAGAGTATGTCA
AGACGACGCAGCAGCTGAGCCCCAGACCTGTGTCTGTAAAACAAGTAATA
TCAGAGACGATGGCAGAGCGGGGCTTTTTCGGCTTCTACCGCGGgctttc
ctccatgctgTACTTCGCGGCACCCAAGGCAGCAATCCGGTTCAGCTCCT
TCGAGTTCTTCTCGGGCCTGCTCACTGACGCCAACGGAGGGGACAAGTAC
GGTCTGGGCCAAGCCAAAGGATTCCTGGCGGGGCTTGGCGCGGGAACCAT
GGAGGCAATCTTCGTGACCACACCGCAGGAGACCATTAAGATCAAGTTGA
TACACGACCAGTTTCGCGGCACTAATAAGTACCAGGGATTCTTCCACGGT
GTGAGGACCatcgtggcggaggagaagctctCCGGGGTATaccgcggcct
cctccccaccatctTGAAGGTCTCCACCGCGCAGGCCACGCGCTTCGGCA
TCTTCAGCGTCATCAAGGACTATGTCAAGCTGGACACCCCCATCAAAAGC
GCGGCGGCTGGCGCCACGGCGGGGGGCATCTCCGTGCTCGCTTTCCAGGG
CATTGACGTGGTGAAGAGCCGGATGCAAggcctggaggcggccaagtACA
AGAGCACCTGGGACTGCGTGGGACAGATCCTGAAGAACGAGGGCGTGGCC
GGCTTTTATAAGGGGGTGGGGCCGCGGTTGACGCGCGTGTGCCTGGAGGT
AGGCATCACGATGAGCATGTACGGGGAGATAGTGAAGCTCCTGGATGCGG
TCTGGGACACCAACCCGCCCAAGGTGCCCATGGCCCAgtagATGGCGCCT
ATCGGGAATAAGCCTACTcacaagggcaaggcggtCTTGGCAGGCGGGCT
CTCGGGGGCCTTTGAAATTTGCTGTACGTTCCCAACAGAGTATGTCAAGA
CGACGCAGCAGCTGAGCCCCAGACCTGTGTCTGTAAAACAAGTAATATCA
GAGACGATGGCAGAGCGGGGCTTTTTCGGCTTCTACCGCGGgctttcctc
catgctgTACTTCGCGGCACCCAAGGCAGCAATCCGGTTCAGCTCCTTCG
AGTTCTTCTCGGGCCTGCTCACTGACGCCAACGGAGGGGACAAGTACGGT
CTGGGCCAAGCCAAAGGATTCCTGGCGGGGCTTGGCGCGGGAACCATGGA
GGCAATCTTCGTGACCACACCGCAGGAGACCATTAAGATCAAGTTGATAC
ACGACCAGTTTCGCGGCACTAATAAGTACCAGGGATTCTTCCACGGTGTG
AGGACCatcgtggcggaggagaagctctCCGGGGTATaccgcggcctcct
ccccaccatctTGAAGGTCTCCACCGCGCAGGCCACGCGCTTCGGCATCT
TCAGCGTCATCAAGGACTATGTCAAGCTGGACACCCCCATCAAAAGCGCG
GCGGCTGGCGCCACGGCGGGGGGCATCTCCGTGCTCGCTTTCCAGGGCAT
TGACGTGGTGAAGAGCCGGATGCAAggcctggaggcggccaagtACAAGA
GCACCTGGGACTGCGTGGGACAGATCCTGAAGAACGAGGGCGTGGCCGGC
TTTTATAAGGGGGTGGGGCCGCGGTTGACGCGCGTGTGCCTGGAGGTAGG
CATCACGATGAGCATGTACGGGGAGATAGTGAAGCTCCTGGATGCGGTCT
GGGACACCAACCCGCCCAAGGTGCCCATGGCCCAgtag back to top
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