EWM26577.1, cds3922 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|553178017|ref|XP_005852516.1| (solute carrier family 25 (mitochondrial carrier citrate transporter) member 1 [Nannochloropsis gaditana CCMP526] >gi|422296020|gb|EKU23319.1| solute carrier family 25 (mitochondrial carrier citrate transporter) member 1 [Nannochloropsis gaditana CCMP526] >gi|585108665|gb|EWM26577.1| solute carrier family 25 (mitochondrial carrier citrate transporter) member 1 [Nannochloropsis gaditana]) HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 Query: 1 MAPIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIKSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTNPPKVPMAQ 298 MAPIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIKSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTNPPKVPMAQ Sbjct: 1 MAPIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIKSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTNPPKVPMAQ 298
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|922854644|gb|KOO23161.1| (tricarboxylate transport mitochondrial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 337.035 bits (863), Expect = 1.391e-112 Identity = 172/293 (58.70%), Postives = 216/293 (73.72%), Query Frame = 0 Query: 1 MAPIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSP-RPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRG-TNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVI-KDYVKLDTPIKSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 MAP GNKP H GKA++AGG+SGA EICCT+P EY KT QL +V+ +T+ G GFYRGLSSM+YFA PKAA+RFS+FE S +L ++G K G+ GF+AGL AGT EAI V+TPQETIKI+LI DQF+ T +++GFFHGV T++ EE G+Y G+ PT+LKV+TAQ TRFG+F+VI +Y K TP+ AA GA AGG+SVL FQG+DVVKSRMQGL+ AKY S+ C ++L NEG FYKGVGPRL+RVC EV ITM++Y E+VK+LD W T+ Sbjct: 1 MAPTGNKPKHAGKAIVAGGISGAIEICCTYPLEYTKTVAQLDKGSGGGAMKVVRDTLKTHGPLGFYRGLSSMVYFATPKAALRFSAFEAASDMLKTSDG--KPMFGKVNGFIAGLVAGTAEAIVVSTPQETIKIRLIDDQFKSETPRFKGFFHGVYTLIKEEGFFGIYHGVAPTVLKVATAQGTRFGVFNVIPSEYRK--TPVSVAACGAFAGGVSVLIFQGLDVVKSRMQGLDGAKYASSLHCAREMLVNEGWLSFYKGVGPRLSRVCCEVAITMTLYAEVVKVLDKYWVTS 289
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|298707155|emb|CBJ29928.1| (similar to Solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 [Ectocarpus siliculosus]) HSP 1 Score: 335.495 bits (859), Expect = 2.664e-112 Identity = 191/292 (65.41%), Postives = 222/292 (76.03%), Query Frame = 0 Query: 3 PIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRP-VSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQF-RGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKD--YVKLDTPIKSAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 P KP HKGKAVLAGG+SG EIC T+P EYVKTT+QLS P V+ V+ T+ GF GFYRGLSSM+YFAAPKAAIRF +FEF SGLL+ GGDKYGLG AKGF+AGLGAG EA VTT QETIKIKLI DQF R Y+ FFHGV+TIVAE SG T+LKVSTAQATRFG+F V+K Y D+P+KSAAAGA AG +SV AFQGIDVVKSRMQGLE+A+Y+ST C ++LKNEG+ FY+G+ PRLTRV EV ITMS+YGE+VK L++VW T+ Sbjct: 4 PAHLKPNHKGKAVLAGGISGVVEICMTYPLEYVKTTRQLSKDPNVTYGSVMRNTVKNTGFSGFYRGLSSMVYFAAPKAAIRFGAFEFCSGLLSTPEGGDKYGLGAAKGFVAGLGAGAAEATLVTTAQETIKIKLIDDQFSREKPLYKNFFHGVKTIVAESGFSG---DGCRTVLKVSTAQATRFGVFQVLKSSPYYGKDSPVKSAAAGAAAGAVSVFAFQGIDVVKSRMQGLESAQYRSTLHCASEMLKNEGITSFYRGMAPRLTRVMCEVAITMSLYGEVVKFLNSVWITD 292
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|929485468|ref|XP_014123872.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Zonotrichia albicollis]) HSP 1 Score: 292.352 bits (747), Expect = 5.101e-95 Identity = 151/295 (51.19%), Postives = 189/295 (64.07%), Query Frame = 0 Query: 7 KPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 K TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ + G G YRGLSS+LY + PKAA+RF +FEF S + D G L +GF+ GLGAG EA+ V P ET+K+K IHDQ KY+GFFHGVR IV E+ L G Y+GL T+LK + QA RF + + ++++ K D P K + GA AG SV +DVVK+RMQGLEA KYK+TWDC QI+K+EG FYKG PRL RVCL+V I +Y E+VKLLD VW T+ Sbjct: 21 KLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDEKANPPRYKGIGDCVKQTVRDHGVRGLYRGLSSLLYGSIPKAAVRFGTFEFLSNRMRDEQGR----LDSTRGFICGLGAGMAEAVAVVCPMETVKVKFIHDQSSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYKGDNPNKAINPFITGVFGAIAGAASVFGNTPLDVVKTRMQGLEAHKYKNTWDCAYQIMKHEGPLAFYKGTVPRLGRVCLDVAIVFIIYDEVVKLLDKVWKTD 311
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|585187157|ref|XP_006745044.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Leptonychotes weddellii]) HSP 1 Score: 290.426 bits (742), Expect = 1.991e-94 Identity = 150/295 (50.85%), Postives = 187/295 (63.39%), Query Frame = 0 Query: 7 KPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 K TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ G G YRGLSS+LY + PKAA+RF FEF S + D G L +G L GLGAG EAI V P ETIK+K IHDQ KY+GFFHGVR IV E+ L G Y+GL T+LK + QA RF + + ++++ + D P K + GA AG SV +DV+K+RMQGLEA KY++TWDC QIL+NEG+ FYKG PRL RVCL+V I +Y E+VKLL+ VW T+ Sbjct: 18 KLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDPQGR----LDSTRGLLCGLGAGVAEAIVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAVAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILRNEGLKAFYKGTIPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD 308
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|632958140|ref|XP_007894864.1| (PREDICTED: tricarboxylate transport protein, mitochondrial-like [Callorhinchus milii]) HSP 1 Score: 291.197 bits (744), Expect = 2.762e-94 Identity = 150/302 (49.67%), Postives = 196/302 (64.90%), Query Frame = 0 Query: 2 APIG--NKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQL-----SPRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIKS------AAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 AP G KPTH GKA+LAGG++G EIC TFPTEYVKT QL R + ++S T+ + G G YRGLSS+LYF+ PK A+RF +FEF S L DA+G L + + GLGAG MEA+ + P ETIK+K IHDQ KY+GFFHGVR I+ E+ L G Y+GL TILK T QA RF + + ++++ D P K+ A GA+AG SV +DVVK+RMQ LE+ KY++T DC QILK+EG++ FYKG PRL RVCL+V IT ++Y E+V++L+ VW + Sbjct: 43 APAGGTRKPTHLGKAILAGGIAGGIEICITFPTEYVKTQLQLLDRVNPSRSSGIGDIVSRTIRDHGVKGLYRGLSSLLYFSIPKTAVRFGTFEFLSNLSRDASGK----LSNTQSMMCGLGAGVMEAVVIVCPMETIKVKFIHDQSLSKPKYRGFFHGVREIILEKGLRGTYQGLSATILKQGTNQAIRFFVMTSLRNWYTGDDPHKTINMLVTAIFGASAGAASVFGNTPLDVVKTRMQSLESHKYRNTLDCAIQILKHEGLSAFYKGTVPRLGRVCLDVAITFTIYEEVVRILNKVWKHD 340
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|589941754|ref|XP_006983598.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Peromyscus maniculatus bairdii]) HSP 1 Score: 289.656 bits (740), Expect = 5.308e-94 Identity = 149/295 (50.51%), Postives = 189/295 (64.07%), Query Frame = 0 Query: 7 KPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 K TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ G G YRGLSS+LY + PKAA+RF +FEF S + DA G L ++G L GLGAG MEA+ V P ETIK+K IHDQ KY+GFFHGVR I+ E+ + G Y+GL T+LK + QA RF + + ++++ + D P K + GA AG SV +DV+K+RMQGLEA KY++T DC QILKNEG FYKG PRL RVCL+V I +Y E+VKLL+ VW T+ Sbjct: 21 KLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGTFEFLSNHMRDAQGR----LDSSRGLLCGLGAGVMEAVMVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIIREQGVKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTLDCGLQILKNEGPKAFYKGTVPRLGRVCLDVAIVFIIYDEVVKLLNKVWKTD 311
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|632967474|ref|XP_007899999.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Callorhinchus milii]) HSP 1 Score: 288.115 bits (736), Expect = 1.919e-93 Identity = 149/297 (50.17%), Postives = 189/297 (63.64%), Query Frame = 0 Query: 5 GNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 G K TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ G G YRGLSS++Y + PKAA+RF +FEF S + DA G L +G + GLGAG EA+ + P ET+K+K IHDQ KY+GFFHGVR IV +E L G Y+GL TILK + QA RF + + ++++ K D P K + GA AG SV +DVVK+RMQGLEA KYKSTWDC +I+K+EG+ FYKG PRL RVCL+V I +Y E+VK+L+ VW T Sbjct: 19 GTKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDEKVYPPRYKGIGDCVKQTVKGHGIRGLYRGLSSLVYGSIPKAAVRFGTFEFLSNQMRDAQGR----LDSKQGLICGLGAGVCEAVLIVCPMETVKVKFIHDQSSTNPKYRGFFHGVREIVKQEGLKGTYQGLTATILKQGSNQAIRFFVMTSMRNWYKGDNPNKVINPLVTGTFGAIAGAASVFGNTPLDVVKTRMQGLEAHKYKSTWDCAFKIMKHEGLFAFYKGTVPRLGRVCLDVAIVFIIYEEVVKILNKVWKTE 311
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|683918505|ref|XP_009090574.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Serinus canaria]) HSP 1 Score: 287.73 bits (735), Expect = 2.547e-93 Identity = 148/295 (50.17%), Postives = 186/295 (63.05%), Query Frame = 0 Query: 7 KPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 K TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ + G G YRGLSS+LY + PKAA+RF +FEF S + D G L + + GLGAG EA+ V P ET+K+K IHDQ KY+GFFHGVR IV E+ L G Y+GL T+LK + QA RF + + ++++ K D P K + GA AG SV +DVVK+RMQGLEA KYK+TWDC QI+K+EG FYKG PRL RVCL+V I +Y E+VK LD VW T+ Sbjct: 21 KLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDEKANPPRYKGIGDCVKQTVRDHGIRGLYRGLSSLLYGSIPKAAVRFGTFEFLSNQMRDEQGR----LDSTRSLICGLGAGMAEAVLVVCPMETVKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYKGDNPNKVINPIVTGVFGALAGAASVFGNTPLDVVKTRMQGLEAHKYKNTWDCAYQIMKHEGPLAFYKGTVPRLGRVCLDVAIVFIIYDEVVKFLDKVWKTD 311
BLAST of EWM26577.1 vs. NCBI_GenBank
Match: gi|1003961318|ref|XP_015733058.1| (PREDICTED: tricarboxylate transport protein, mitochondrial [Coturnix japonica]) HSP 1 Score: 285.419 bits (729), Expect = 1.974e-92 Identity = 149/293 (50.85%), Postives = 184/293 (62.80%), Query Frame = 0 Query: 9 THKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLS-----PRPVSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQFRGTNKYQGFFHGVRTIVAEEKLSGVYRGLLPTILKVSTAQATRFGIFSVIKDYVKLDTPIK------SAAAGATAGGISVLAFQGIDVVKSRMQGLEAAKYKSTWDCVGQILKNEGVAGFYKGVGPRLTRVCLEVGITMSMYGEIVKLLDAVWDTN 290 TH GKA+LAGGL+G EIC TFPTEYVKT QL PR + + +T+ + G G YRGLSS++Y + PKAA+RF FEF S + D G L +G + GLGAG EA+ V P ETIK+K IHDQ KY+GFFHGVR IV E+ L G Y+GL T+LK + QA RF + + +K++ K D P K + GA AG SV +DVVK+RMQGLEA KYKSTWDC QI+K EG FYKG PRL RVCL+V I +Y E+VK L+ VW T+ Sbjct: 22 THPGKAILAGGLAGGIEICITFPTEYVKTQLQLDEKANPPRYKGIGDCVKQTVRDHGVRGLYRGLSSLVYGSIPKAAVRFGMFEFLSNQMRDEQGR----LDSTRGLVCGLGAGVAEAVMVVCPMETIKVKFIHDQCSSKPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLKNWYKGDDPNKVINPFVTGVFGALAGAASVFGNTPLDVVKTRMQGLEAHKYKSTWDCAYQIMKYEGPLAFYKGTVPRLGRVCLDVAIVFVIYDEVVKFLNKVWKTD 310 The following BLAST results are available for this feature:
BLAST of EWM26577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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