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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1751, integral membrane, eukaryotic |
| Orig transcript id | gnl|cribi|Naga_100003g94.1823.mrna |
| Orig protein id | gnl|cribi|Naga_100003g94.1823 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:971502..973685 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna392 ID=rna392|Name=rna392|organism=Nannochloropsis gaditana|type=mRNA|length=1381bp
CTTGTCCCGATACACTTCATTGGTTGTCATTCACCATCACCCATAACAAT
GGTCAAGCCCTCAAGTAGCTCACATTCCTCCCGCCTCTCATCATCATCAG
GGCCCATCTCTCGCTGAAAGCCCTCAAACCCTTGGTCCTATCAATCTTCC
CGTGAATCATAAAGTTAAAAGCTGATGGCAACGAAAATGAGCCGATCGGG
CCTAGTATTTGGAACAGCGACGGCTCTTATCATCGCATATTCAGCAATGG
CCTTCAGTCCTGGAGGTGTAGGCATGGCGCTTCCTCTTGTCTTGGGCAAC
ACGTATATGAACAACTTCTTCATCTGGACAACCCTTACGAGCGCATTCAC
AGAGACTTCAGGCCTTAAAGTGTCGCTTGACTTACTGGTTCTGATATGGC
TTGTGAGCCGCATCGGCCCTTTAGAGGACTTACTTGAACCTGTCCGGCTG
GCGGCGCTGACAATTATAGCCGCAGTGGGCTCAGCTTTATGCACGAGCGT
TTTGGTTTTCATGTTTTATGTCGTCACTCGGTGGGAAACCCTGTTTTTCA
CCCCAATTTACGGTTATGGTCCTATTTTGATGGCCTACTTTATTCTTACA
GCGCAGAAAGTGCCCACGGAGGCCTTTTTTTCACCTCCGAATATTTTTCG
CGGCGTTTTCCCGTCCTTCTGCATGCAGCAGCTGCCCTTCACATTTTTCT
GTGTCTCGGCGCTTCTCCGCGCGCTCCTTCCAATTCGGTTTGCAGTAGCG
GGAAGCATGACAATGGATTTCCCCCTCCTGGCTTGCTCTTTCGCTGTGTC
ATGGTTATACCTCCGATTTTTCCAGCACAACAGCGATGGCTCCGTCGGGG
ACACGTCCGAAGATTTCCAATTGGTCAACTTGTTCCCTAGTTTTTCACGT
CCTTATTTGCGACCAGTGTTCGACTTCTGCTACGGTGTCTTGGCTCTCTG
TGGACAATGCAAAGAGCGAGAGCTCGCCATGGCGTCGAATTTAATAGAGG
AAGAGGAGAATTTATTGCTCGGGAAAGACTATTTTACAAGCCGGGCCAGC
AACGACGTTCAAAATCATTCTCTACAGGATCAGAGATGCAATATTCACGG
GGAAACCCCTGAAAATCGTTCAAAGACTGATTCTGTGACAGAACGAAGAA
GGATTAAGGCTCTCCAGGCACTTGAGACACGCCTTCATAGCATAGCAGCG
AAAGAAAAGGAAGTTTCCAAACTAAACGTGGCTTCAAGAACAGTTGATGA
AGCGGCGCAGACCACGGCCGATGTTTGAATGGGTCCTTAGAAAATCTGTT
AATTTTTTCGGTGAAAATAAGCACCACACCAGAGATCTTTTGCTGTTTTC
GCATTTTTTTCCCACCCAAAAGGGAGCATTC back to topprotein sequence of rna392 >rna392-protein ID=rna392-protein|Name=rna392|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MYSARTDFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPV
RLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFI
LTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFA
VAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSF
SRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSR
ASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSI
AAKEKEVSKLNVASRTVDEAAQTTADV back to topmRNA from alignment at CM002455.1:971502..973685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna392 ID=rna392|Name=rna392|organism=Nannochloropsis gaditana|type=mRNA|length=2184bp|location=Sequence derived from alignment at CM002455.1:971502..973685- (Nannochloropsis gaditana)
CTTGTCCCGATACACTTCATTGGTTGTCATTCACCATCACCCATAACAAT
GGTCAAGCCCTCAAGTAGCTCACATTCCTCCCGCCTCTCATCATCATCAG
GGCCCATCTCTCGCTGAAAGCCCTCAAACCCTTGGTCCTATCAATCTTCC
CGTGAATCATAAAGTTAAAAGCTGATGGCAACGAAAATGAGCCGATCGGG
CCTAGTATTTGGAACAGCGACGGCTCTTATCATCGCATATTCAGCAATGG
CCTTCAGTCCTGGAGGTGTAGGCATGGCGCTTCCTCTTGTCTTGGGCAAC
ACGTATATGAACAGTAAGTAAAGTCTGCCATCAATTGAGGTACGATGCTT
GCTCGAGTTTAAGCTGTGCGTATCATTTTTGTGCTCTAGCTAAGCTTTCT
GGTTCGTTGCTGCAACTGATGAAAGATTTCAACGACAAAATGCCCGCAGC
CACATTCGATGTTTGAGGTTGTCACTATTGTGATAAATCGACCGTATATC
TCTCTTTGCAAGCTTGATAAGCGCTGTAACTGAAGCCAACCTCAATTCCC
TAATGTACTCGGCGCGCACAGACTTCTTCATCTGGACAACCCTTACGAGC
GCATTCACAGAGACTTCAGGCCTTAAAGTGTCGCTTGACTTACTGGTTCT
GATATGGCTTGTGAGCCGCATCGGCCCTTTAGAGGACTTACTTGAACCTG
TCCGGCTGGCGGCGCTGACAATTATAGCCGCAGTGGGCTCAGCTTTATGC
ACGAGCGTTTTGGTTTTCATGTTTTATGTCGTCACTCGGTGGGAAACCCT
GTTTTTCACCCCAATTTACGGTTATGGTCCTATTTTGATGGCCTACTTTA
TTCTTACAGCGCAGAAAGTGCCCACGGAGGCCTTTTTTTCACCTCCGAAT
ATTTTTCGCGGCGTTTTCCCGTCCTTCTGCATGCAGCAGCTGCCCTTCAC
ATTTTTCTGTGTCTCGGCGCTTCTCCGCGCGCTCCTTCCAATTCGGTTTG
CAGTAGCGGGAAGCATGACAATGGATTTCCCCCTCCTGGCTTGCTCTTTC
GCTGTGTCATGGTTATACCTCCGATTTTTCCAGCACAACAGCGATGGCTC
CGTCGGGGACACGTCCGAAGATTTCCAATTGGTCAACTTGTTCCCTAGTG
TAAGTGTGCTCTTTCTGTAAGCCATCTGGGGGGAAGAAGATTGGAAAAGG
CATAGTGCACGTCTCATATGTATTTTGCGTAGTACACAAACACGCAGATA
GGTTCAGAAATGCTAGGGAAGCCGTAGCCAACTCATGGATTCACTAATCC
AACTCGTCTCTAGTTTTCACGTCCTTATTTGCGACCAGTGTTCGACTTCT
GCTACGGTGTCTTGGCTCTCTGTGGACAATGCAAAGAGCGAGAGGTAGGG
TCGATGACACGTCAAAGCCACCATCATACTGTTCGTCATTCGATCTATCC
GGTAGCCTTTCATACTCTTTGTGGTTCGTGATGGCGAAGGCACATTTGTG
CGATACGCTTGAGACAAAGCATGTATATCCTTACACATATATTTGCCGAC
GCCAACACATATTTCTTACCCTTTCGTACACAAACAAGCTCGCCATGGCG
TCGAATTTAATAGAGGAAGAGGAGAATTTATTGCTCGGGAAAGACTATTT
TACAAGCCGGGCCAGCAACGACGTTCAAAATCATTCTCTACAGGATCAGA
GATGCAATATTCACGGGGAAACCCCTGAAAATCGTTCAAAGACTGATTCT
GTGACAGAACGAAGAAGGATTAAGGTATTTAAAATGTTGTATATACGAAA
GTTGTCCTATCTTGTCAGTAAGTTTGCGGTACATATGGAAGAAAATACTC
TCCCCTCGTTCATGAAGGAGAGGTGTTTGTTTCAGGTGTGTTGATGTTGT
TCTCAACGCAACTTTTCAGGCTCACGATACTCCCATGCCCTGTCTCCAAA
CTATATTGTAGGCTCTCCAGGCACTTGAGACACGCCTTCATAGCATAGCA
GCGAAAGAAAAGGAAGTTTCCAAACTAAACGTGGCTTCAAGAACAGTTGA
TGAAGCGGCGCAGACCACGGCCGATGTTTGAATGGGTCCTTAGAAAATCT
GTTAATTTTTTCGGTGAAAATAAGCACCACACCAGAGATCTTTTGCTGTT
TTCGCATTTTTTTCCCACCCAAAAGGGAGCATTC back to topCoding sequence (CDS) from alignment at CM002455.1:971502..973685- >rna392 ID=rna392|Name=rna392|organism=Nannochloropsis gaditana|type=CDS|length=3936bp|location=Sequence derived from alignment at CM002455.1:971502..973685- (Nannochloropsis gaditana)
GCTCTCCAGGCACTTGAGACACGCCTTCATAGCATAGCAGCGAAAGAAAA
GGAAGTTTCCAAACTAAACGTGGCTTCAAGAACAGTTGATGAAGCGGCGC
AGACCACGGCCGATGTTTGACTCGCCATGGCGTCGAATTTAATAGAGGAA
GAGGAGAATTTATTGCTCGGGAAAGACTATTTTACAAGCCGGGCCAGCAA
CGACGTTCAAAATCATTCTCTACAGGATCAGAGATGCAATATTCACGGGG
AAACCCCTGAAAATCGTTCAAAGACTGATTCTGTGACAGAACGAAGAAGG
ATTAAGTTTTCACGTCCTTATTTGCGACCAGTGTTCGACTTCTGCTACGG
TGTCTTGGCTCTCTGTGGACAATGCAAAGAGCGAGAGATGTACTCGGCGC
GCACAGACTTCTTCATCTGGACAACCCTTACGAGCGCATTCACAGAGACT
TCAGGCCTTAAAGTGTCGCTTGACTTACTGGTTCTGATATGGCTTGTGAG
CCGCATCGGCCCTTTAGAGGACTTACTTGAACCTGTCCGGCTGGCGGCGC
TGACAATTATAGCCGCAGTGGGCTCAGCTTTATGCACGAGCGTTTTGGTT
TTCATGTTTTATGTCGTCACTCGGTGGGAAACCCTGTTTTTCACCCCAAT
TTACGGTTATGGTCCTATTTTGATGGCCTACTTTATTCTTACAGCGCAGA
AAGTGCCCACGGAGGCCTTTTTTTCACCTCCGAATATTTTTCGCGGCGTT
TTCCCGTCCTTCTGCATGCAGCAGCTGCCCTTCACATTTTTCTGTGTCTC
GGCGCTTCTCCGCGCGCTCCTTCCAATTCGGTTTGCAGTAGCGGGAAGCA
TGACAATGGATTTCCCCCTCCTGGCTTGCTCTTTCGCTGTGTCATGGTTA
TACCTCCGATTTTTCCAGCACAACAGCGATGGCTCCGTCGGGGACACGTC
CGAAGATTTCCAATTGGTCAACTTGTTCCCTAGTGCTCTCCAGGCACTTG
AGACACGCCTTCATAGCATAGCAGCGAAAGAAAAGGAAGTTTCCAAACTA
AACGTGGCTTCAAGAACAGTTGATGAAGCGGCGCAGACCACGGCCGATGT
TTGACTCGCCATGGCGTCGAATTTAATAGAGGAAGAGGAGAATTTATTGC
TCGGGAAAGACTATTTTACAAGCCGGGCCAGCAACGACGTTCAAAATCAT
TCTCTACAGGATCAGAGATGCAATATTCACGGGGAAACCCCTGAAAATCG
TTCAAAGACTGATTCTGTGACAGAACGAAGAAGGATTAAGTTTTCACGTC
CTTATTTGCGACCAGTGTTCGACTTCTGCTACGGTGTCTTGGCTCTCTGT
GGACAATGCAAAGAGCGAGAGATGTACTCGGCGCGCACAGACTTCTTCAT
CTGGACAACCCTTACGAGCGCATTCACAGAGACTTCAGGCCTTAAAGTGT
CGCTTGACTTACTGGTTCTGATATGGCTTGTGAGCCGCATCGGCCCTTTA
GAGGACTTACTTGAACCTGTCCGGCTGGCGGCGCTGACAATTATAGCCGC
AGTGGGCTCAGCTTTATGCACGAGCGTTTTGGTTTTCATGTTTTATGTCG
TCACTCGGTGGGAAACCCTGTTTTTCACCCCAATTTACGGTTATGGTCCT
ATTTTGATGGCCTACTTTATTCTTACAGCGCAGAAAGTGCCCACGGAGGC
CTTTTTTTCACCTCCGAATATTTTTCGCGGCGTTTTCCCGTCCTTCTGCA
TGCAGCAGCTGCCCTTCACATTTTTCTGTGTCTCGGCGCTTCTCCGCGCG
CTCCTTCCAATTCGGTTTGCAGTAGCGGGAAGCATGACAATGGATTTCCC
CCTCCTGGCTTGCTCTTTCGCTGTGTCATGGTTATACCTCCGATTTTTCC
AGCACAACAGCGATGGCTCCGTCGGGGACACGTCCGAAGATTTCCAATTG
GTCAACTTGTTCCCTAGTGCTCTCCAGGCACTTGAGACACGCCTTCATAG
CATAGCAGCGAAAGAAAAGGAAGTTTCCAAACTAAACGTGGCTTCAAGAA
CAGTTGATGAAGCGGCGCAGACCACGGCCGATGTTTGACTCGCCATGGCG
TCGAATTTAATAGAGGAAGAGGAGAATTTATTGCTCGGGAAAGACTATTT
TACAAGCCGGGCCAGCAACGACGTTCAAAATCATTCTCTACAGGATCAGA
GATGCAATATTCACGGGGAAACCCCTGAAAATCGTTCAAAGACTGATTCT
GTGACAGAACGAAGAAGGATTAAGTTTTCACGTCCTTATTTGCGACCAGT
GTTCGACTTCTGCTACGGTGTCTTGGCTCTCTGTGGACAATGCAAAGAGC
GAGAGATGTACTCGGCGCGCACAGACTTCTTCATCTGGACAACCCTTACG
AGCGCATTCACAGAGACTTCAGGCCTTAAAGTGTCGCTTGACTTACTGGT
TCTGATATGGCTTGTGAGCCGCATCGGCCCTTTAGAGGACTTACTTGAAC
CTGTCCGGCTGGCGGCGCTGACAATTATAGCCGCAGTGGGCTCAGCTTTA
TGCACGAGCGTTTTGGTTTTCATGTTTTATGTCGTCACTCGGTGGGAAAC
CCTGTTTTTCACCCCAATTTACGGTTATGGTCCTATTTTGATGGCCTACT
TTATTCTTACAGCGCAGAAAGTGCCCACGGAGGCCTTTTTTTCACCTCCG
AATATTTTTCGCGGCGTTTTCCCGTCCTTCTGCATGCAGCAGCTGCCCTT
CACATTTTTCTGTGTCTCGGCGCTTCTCCGCGCGCTCCTTCCAATTCGGT
TTGCAGTAGCGGGAAGCATGACAATGGATTTCCCCCTCCTGGCTTGCTCT
TTCGCTGTGTCATGGTTATACCTCCGATTTTTCCAGCACAACAGCGATGG
CTCCGTCGGGGACACGTCCGAAGATTTCCAATTGGTCAACTTGTTCCCTA
GTGCTCTCCAGGCACTTGAGACACGCCTTCATAGCATAGCAGCGAAAGAA
AAGGAAGTTTCCAAACTAAACGTGGCTTCAAGAACAGTTGATGAAGCGGC
GCAGACCACGGCCGATGTTTGACTCGCCATGGCGTCGAATTTAATAGAGG
AAGAGGAGAATTTATTGCTCGGGAAAGACTATTTTACAAGCCGGGCCAGC
AACGACGTTCAAAATCATTCTCTACAGGATCAGAGATGCAATATTCACGG
GGAAACCCCTGAAAATCGTTCAAAGACTGATTCTGTGACAGAACGAAGAA
GGATTAAGTTTTCACGTCCTTATTTGCGACCAGTGTTCGACTTCTGCTAC
GGTGTCTTGGCTCTCTGTGGACAATGCAAAGAGCGAGAGATGTACTCGGC
GCGCACAGACTTCTTCATCTGGACAACCCTTACGAGCGCATTCACAGAGA
CTTCAGGCCTTAAAGTGTCGCTTGACTTACTGGTTCTGATATGGCTTGTG
AGCCGCATCGGCCCTTTAGAGGACTTACTTGAACCTGTCCGGCTGGCGGC
GCTGACAATTATAGCCGCAGTGGGCTCAGCTTTATGCACGAGCGTTTTGG
TTTTCATGTTTTATGTCGTCACTCGGTGGGAAACCCTGTTTTTCACCCCA
ATTTACGGTTATGGTCCTATTTTGATGGCCTACTTTATTCTTACAGCGCA
GAAAGTGCCCACGGAGGCCTTTTTTTCACCTCCGAATATTTTTCGCGGCG
TTTTCCCGTCCTTCTGCATGCAGCAGCTGCCCTTCACATTTTTCTGTGTC
TCGGCGCTTCTCCGCGCGCTCCTTCCAATTCGGTTTGCAGTAGCGGGAAG
CATGACAATGGATTTCCCCCTCCTGGCTTGCTCTTTCGCTGTGTCATGGT
TATACCTCCGATTTTTCCAGCACAACAGCGATGGCTCCGTCGGGGACACG
TCCGAAGATTTCCAATTGGTCAACTTGTTCCCTAGT back to top
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