EWM30306.1, cds392 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|585112965|gb|EWM30306.1| (Protein of unknown function DUF1751, integral membrane, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0 Query: 1 MYSARTDFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 327 MYSARTDFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV Sbjct: 1 MYSARTDFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 327
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|585112964|gb|EWM30305.1| (Protein of unknown function DUF1751, integral membrane, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0 Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0 Query: 7 DFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 327 +FFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV Sbjct: 47 NFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 367
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|299471462|emb|CBN79413.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.457 bits (267), Expect = 9.653e-23 Identity = 90/302 (29.80%), Postives = 135/302 (44.70%), Query Frame = 0 Query: 6 TDFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPL-EDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYG-YGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRAL-LPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGS-VGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAK 303 T F+ W LT +F ETS K+ L+ V+ +GP ED L + L A + + S TS +FM Y+VTR E L ++G +G + Q + G P F + LP SA+ RAL +P+ + DFP + SW+YLRFF H G+ GD +EDFQLVN FP R ++P+ DF YGV L G K R + ++++ + + D TP ++ D + ERRR +A++ L+ + ++ AK Sbjct: 51 TQFYFWNVLTGSFVETSVFKLVASLIG----VAGLGPAAEDSLGHLGLGAFVLCVGLVSGFVTSCGIFMGYIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPA------GRAPWFPTRYLPLLLVTASAMCRALSVPV-------VAKDFPFVVVGAYASWVYLRFFAHLVLGAPSGDVTEDFQLVNFFPLPCRRVVKPMCDFTYGVFLLLGCFKGRAARLPVSVVDGQGGV---------------------DPLVVATLPTP---ARKDPIAERRRARAMKLLDEKFATLNAK 311
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|698776052|ref|XP_009821070.1| (hypothetical protein H257_00202 [Aphanomyces astaci] >gi|574123195|gb|ETV88670.1| hypothetical protein H257_00202 [Aphanomyces astaci]) HSP 1 Score: 91.6633 bits (226), Expect = 1.796e-17 Identity = 81/304 (26.64%), Postives = 126/304 (41.45%), Query Frame = 0 Query: 11 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEV 307 W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ N SL +D VTERR+ +A++AL+ +L +A V Sbjct: 52 WAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ------------------------GHNATSGSSLAKAAL-----------ASDPVTERRKARAMKALDEKLAKLAVMPSSV 300
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|673017886|ref|XP_008862904.1| (hypothetical protein H310_01556 [Aphanomyces invadans] >gi|574482107|gb|ETW09099.1| hypothetical protein H310_01556 [Aphanomyces invadans]) HSP 1 Score: 89.3521 bits (220), Expect = 1.093e-16 Identity = 84/316 (26.58%), Postives = 126/316 (39.87%), Query Frame = 0 Query: 11 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLP---IRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQT 323 W +T+ F +V L + ++L SR+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A+ + + +D VTERR+ +A++AL+ +L +A V+ AS V + +T Sbjct: 52 WAYITAPFYHQHLWEVVLIVPATLYLGSRVEIALGTMSFVRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-------YYPLMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAAASLPKT--------------------------------------FPSDPVTERRKARAMKALDEKLAKLAVVPSGVAT---ASLLVHDDVET 310
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|673017890|ref|XP_008862906.1| (hypothetical protein, variant 6 [Aphanomyces invadans] >gi|574482113|gb|ETW09105.1| hypothetical protein, variant 6 [Aphanomyces invadans]) HSP 1 Score: 84.3445 bits (207), Expect = 1.570e-15 Identity = 73/262 (27.86%), Postives = 106/262 (40.46%), Query Frame = 0 Query: 50 VRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLP---IRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVS 308 VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R +P L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A+ + + +D VTERR+ +A++AL+ +L +A V+ Sbjct: 4 VRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-YYP------LMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAAASLPKT--------------------------------------FPSDPVTERRKARAMKALDEKLAKLAVVPSGVA 211
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|673017894|ref|XP_008862908.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|673017896|ref|XP_008862909.1| hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574482108|gb|ETW09100.1| hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574482109|gb|ETW09101.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 84.3445 bits (207), Expect = 3.996e-15 Identity = 71/234 (30.34%), Postives = 102/234 (43.59%), Query Frame = 0 Query: 11 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLP---IRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKEREL-AMASNLIEEEENL 240 W +T+ F +V L + ++L SR+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A A++L+ L Sbjct: 52 WAYITAPFYHQHLWEVVLIVPATLYLGSRVEIALGTMSFVRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-------YYPLMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAAASLVCYSSTL 269
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|698776056|ref|XP_009821072.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574123197|gb|ETV88672.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 83.5741 bits (205), Expect = 7.619e-15 Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 11 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERE 226 W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ Sbjct: 52 WAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ 254
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|698776058|ref|XP_009821073.1| (hypothetical protein, variant 3 [Aphanomyces astaci] >gi|698776060|ref|XP_009821074.1| hypothetical protein, variant 4 [Aphanomyces astaci] >gi|574123198|gb|ETV88673.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574123199|gb|ETV88674.1| hypothetical protein, variant 4 [Aphanomyces astaci]) HSP 1 Score: 82.0333 bits (201), Expect = 2.205e-14 Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 11 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERE 226 W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ Sbjct: 52 WAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ 254
BLAST of EWM30306.1 vs. NCBI_GenBank
Match: gi|674574772|emb|CDS39656.1| (transmembrane protein 115 [Echinococcus multilocularis]) HSP 1 Score: 82.0333 bits (201), Expect = 3.569e-14 Identity = 67/221 (30.32%), Postives = 106/221 (47.96%), Query Frame = 0 Query: 9 FIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFF-TPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFT-FFC--VSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKER 225 +IWT LT +F T L V LD+ + + + P + E VR A++ + + G A+CT +F+ Y T L + TPI G P+L A ++ Q P + P F + + FT FFC + A+LR + I F LL+ V+W+YLRFFQ +S+G +GDT++ F+ FP+ P + + Y +L C+ + Sbjct: 49 WIWTLLTFSFYNTRILHVFLDMTTVYLVDVVMFPSWKMTEVVRCCAISQLVSTGLAVCT---LFIGYACTFDTNLLWKTPICGLSPLLGAALVVARQLTPNNVLANLP------LGKFRTKHIAFTIFFCFLLFAILRIIDYIHFL----------LLSYGAFVTWVYLRFFQRHSNGDIGDTTDAFKFSGFFPNHLEPPVSIASNAIYNLLVKLHLCRSQ 250 The following BLAST results are available for this feature:
BLAST of EWM30306.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|