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Properties
| Property Name | Value |
|---|
| Product | agmatine deiminase |
| Orig transcript id | gnl|cribi|Naga_100001g224.8248.mrna |
| Orig protein id | gnl|cribi|Naga_100001g224.8248 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:379499..381908 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3904 ID=rna3904|Name=rna3904|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp
CACCCAACCCACCTCCTTCCGATTTGTGCTCATGACACGTGAGGGCAATA
GATACTTTTGCGTCACGCTCAAACAAACAACTGGACATTTGAAGAAGCCT
GCAGGTCACACACCCTGCATACGCGGAAGCACAGACCACATGGCTGCACT
TGGCCGAAAAGGGCCTTTAAGAAGGAGTGTCCCGGGCCGGGAAGGAAAAA
GCGAGGCAGGTTGCCGTAGGACACATATCATTAGAAATGACACACCGCCA
TGCCCCGGGATGGTGCGCTTTCTCGAACACTCGGTAAGGATGGCCTGATT
ATGACGATAAATCCCTTTTGAAGCTTTCAACATGGTGCATCCTCGATTTT
TAACCCTTGTTGCAAAGTCGGACACGACGACGCCGCCAAAGCCTCCTTGA
GGTGCTACACACGCCATGTCTCTTGAAGTAAACAGGCACGACTTTTGTTT
AGGTACTCGCCATGGACCAACAAGGCAAAGAAATCCACGATCCCCACGAC
AAGAAGGCGCATACCCGCCCGGATGTGGCTAGAGGGCGTCAATTTGAACG
CCGCAGTGGAACTGGCCGAGAGGAAACGCAAAAGAAGGGTGGTGCCGGAA
AAGCCAATTGGGGGAACGAGCTCGAGGTAAGGGCAAGGAGAGGGTATGTC
CCCCTCGTGTGCATTCGGATGCGCAGTATAATAGCTGGGTTGTGCATGAA
GAGCAAGGCTTGGTTGCAGGAATGTTCTTCTCCCCGTAAAGTTTGCGGCG
GGTGGCGTCTATGATTGCGCTCGCTATGTTTTGCATGTCTTATGACCCTG
TTGATCTAGCTCGTGCGCCCGTCATTGCCTCATTCAACATACACCCACTC
CATGGCCCCTACCGGCATCAGGACGTGGACGAGATCGTCCGAGAAGTGCA
TGAGGAGATGGCGGTTCAGAAGTAGGGAGTTGGCGGATGCCTGAGGGCTC
GGGGGGCCGTCGGCGAGCGATCAAGCCGAGCGATAGACAGAGAGGGGCCG
CAGCGAGAGAGTTGCATAGGACCAGAAGGGATTATTGGCGCCGTTAGAGG
CGTGGCAAGGCTAGCAGAGACGGTGTGGGAGAGACCGGGGAGCGAGGGAG
AGGTAGTAAGCGCAGGGAGCGATGTGAACGAGGGGGGCTGAGGTCTTGCG
CGACAGGACAAAGTAGTTGACTAGCTTGACGTGGGAGGAGGGGAAATTAA
AAATCATGAAAAAACCACCAGGAGGACAGCGTCGCTGGCTGGTGGTAGGA
CGCGTTCGAAACAGTCCATGCATGCACTCGCGACCTTACAGGAGAGGGCC
ACACCCCAGGGTGCATGACCTCCGAGTTGATTTCCTTTGATTTGCCCCTG
TCACCCCACGGACGGCCCGGGCGCCCTCCC back to topprotein sequence of rna3904 >rna3904-protein ID=rna3904-protein|Name=rna3904|organism=Nannochloropsis gaditana|type=polypeptide|length=521bp
MQRLKRHSCPAPVFEVIYSIEKLTLTRHICRNLRDSMSSIAPLSAKGAAS
MLLFLGFVMGSATVIAAVAIQDLLDLDPILRGWLKKRRNSKGDGSNGSPL
KRPVPSFLEAMYLYERKVGWGEVIPSSPQEDGFCMPAAWEAHAGCWLLFP
CRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHP
GVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRD
QLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPS
LAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVIL
HWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGV
EGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRR
MPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLL
RGGGNIHCVTQQQPTNQFDAF back to topmRNA from alignment at CM002462.1:379499..381908+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3904 ID=rna3904|Name=rna3904|organism=Nannochloropsis gaditana|type=mRNA|length=2410bp|location=Sequence derived from alignment at CM002462.1:379499..381908+ (Nannochloropsis gaditana)
CAACAAGGGTTAAAAATCGAGGATGCACCATGTTGAAAGCTTCAAAAGGG
ATTTATCGTCATAATCAGGCCATCCTTACCGAGTGTTCGAGAAAGCGCAC
CATCCCGGGGCATGGCGGTGTGTCATTTCTAATGATATGTGTCCTACGGC
AACCTGcctcgctttttccttcccggccCGGGACACTCCTTCTTAAAGGC
CCTTTTCGGCCAAGTGCAGCCATGTGGTCTGTGCTTCCGCGTATGCAGGG
TGTGTGACCTGCAGGCTTCTTCAAATGTCCAGTTGTTTGTTTGAGCGTGA
CGCAAAAGTATCTATTGCCCTCACGTGTCATGAGCACAAATCGGAAGGAG
GTGGGTTGGGTGACAGCCTAGAGCTCAAGGACAGGAAAACACGCCCTTGC
AACCGGTTAAAATGATAAGAAATTTCTATCAGTTTGTCTGAATTCATACG
ACTGCTCAACATGGAAACGGGGGAAACATTGACTTGATAAACGAGGAATG
CAACGTTTAAAAAGGCATTCCTGCCCTGCACCCGTGTTTGAAGTTATTTA
TTCAATTGAAAAATTAACCTTGACGCGCCATATATGCCGCAATTTGCGAG
ACAGTATGTCATCTATAGCACCCCTGTCTGCCAAAGGGGCGGCTTCGATG
CTTCTGTTCCTAGGTTTTGTGATGGGAAGCGCTACAGTCATTGCTGCCGT
CGCGATTCAAGATCTCCTTGATTTGGACCCGATACTCCGAGGCTGGTTGA
AAAAGAGGCGAAACTCCAAGGGAGATGGCAGCAATGGCAGCCCTTTGAAA
AGGCCGGTCCCGTCGTTTTTGGAAGCCATGTATTTGTACGAAAGAAAggt
gggatggggggaagtTATCCCCTCTAGTCCACAGGAGGACGGTTTCTGCA
TGCCGGCTGCGTGGGAGGCTCACGCGGGCTgctggctcctcttcccctgt
cgTCGCGACAGGCGGGCGCACGAGTTGGAGGGCGTTCAAACGGTGTACGC
ACACATTGCAAACGCCATCCAAGAACACGGGAGCGAGCAAGTGACGGTGG
GAGTGCGGGCtgaggactgggaggaggccagggcgtTGCTGCACCCCGGG
GTgcgcgtggtggagatggagtcGGACAGCGCCTGGGCGAGGGACTCGGG
ACCGACTTTCGTGGTGagggatgacggggaggaggagatgcgggaAGTGC
GGGGTGTGGACTGGGCGATGGGCACGGAAGGCCCGTGCGGGAGGGACCAA
CTCGTGGCGcggaaggtgctggaggtggagaagatCCGGAGGTATGCAGC
CCCCTTAGTCATGGGAGGGGGCTGTTTTCacgtggacggagagggtACGT
GTCTGGTCACAGAGGAATCGCTCTTGTCGCCGACGCAGCGGCCAAgcctg
gccaaggaggcggtggaagaggtcTTGCGGAGGTACCTGGGGGTGGAGCG
AGTGATATGGCTGGAGAAAGGCGTGtacggggacgaggacagaCAGGGAC
GCGTGGACAGCCTGGCTTGCTTCAAGGGCCCCGGGGAGGTGATCCTTCAC
TGGACCGACGACGAGATGGACCCGCAGTTCGACCGATCCTGGTCAGCCTT
TATCCGCCTGACGCAAGCCACCGACGCCAAAGGCCGAGCGCTCCGGATCC
ACAAGATGCCCATGCCTGGGCCCATCTTCGACGAGCAAGGGGGTGTGGAG
GGGTCGCTCCTGTCGGGGGCGGGCTGTACGCctgcgggaagggaggaagg
aaaggagggagggaaggagaaagggagggaggaagggagggagggcacgc
aCGAAGAGGGAAACGCGCGCATCGTTGGACGCAAGGTGGGCCGGCGCATG
CCGGCCTCGTACGTGAACTTCTACATAGCCAACGAGGCTATCGTCGTACC
GCAGTTCATGGATcccaaggacgaggaggccatAGAGCTCCTCCAGTTCC
TGTACCCAGAGCGGCGCGTGATAGGCGTCTGCACGCGGGATCTtcttcgg
ggggggggcaacaTCCACTGCGTcacgcagcagcagccgacCAACCAGTT
CGATGCGTTTTGAAGGCGGGAAGCAAGGGCGTGTGGGCCTGTAAATActt
tgagggagggacttgGGACAGGGTGGGGGGCCGGAGTGACTCACTAAGGT
CTGCTCCGGCTGGAAATGGCCCCGTTGCACATTAGGTGGGATCGAAAGCA
TTATTTTTGGAGAGCAGCACTGTTTGCCTGTGCCCGCAGCAAGGGGTAAA
AGACGTTTGAGACCATCCTTtcaaggtgaaggaggcaggggtgtcTGCTT
TTCCATCTCCATCGAAACGATTTCTTTTGCCTTTTTGCGTTTTAGCCGTC
GGTTCATCCTGCAAAGCTTTGTCAATCCATCCATACTTCTCTTGTGTCTA
TAGTTAACAG back to topCoding sequence (CDS) from alignment at CM002462.1:379499..381908+ >rna3904 ID=rna3904|Name=rna3904|organism=Nannochloropsis gaditana|type=CDS|length=1566bp|location=Sequence derived from alignment at CM002462.1:379499..381908+ (Nannochloropsis gaditana)
ATGCAACGTTTAAAAAGGCATTCCTGCCCTGCACCCGTGTTTGAAGTTAT
TTATTCAATTGAAAAATTAACCTTGACGCGCCATATATGCCGCAATTTGC
GAGACAGTATGTCATCTATAGCACCCCTGTCTGCCAAAGGGGCGGCTTCG
ATGCTTCTGTTCCTAGGTTTTGTGATGGGAAGCGCTACAGTCATTGCTGC
CGTCGCGATTCAAGATCTCCTTGATTTGGACCCGATACTCCGAGGCTGGT
TGAAAAAGAGGCGAAACTCCAAGGGAGATGGCAGCAATGGCAGCCCTTTG
AAAAGGCCGGTCCCGTCGTTTTTGGAAGCCATGTATTTGTACGAAAGAAA
ggtgggatggggggaagtTATCCCCTCTAGTCCACAGGAGGACGGTTTCT
GCATGCCGGCTGCGTGGGAGGCTCACGCGGGCTgctggctcctcttcccc
tgtcgTCGCGACAGGCGGGCGCACGAGTTGGAGGGCGTTCAAACGGTGTA
CGCACACATTGCAAACGCCATCCAAGAACACGGGAGCGAGCAAGTGACGG
TGGGAGTGCGGGCtgaggactgggaggaggccagggcgtTGCTGCACCCC
GGGGTgcgcgtggtggagatggagtcGGACAGCGCCTGGGCGAGGGACTC
GGGACCGACTTTCGTGGTGagggatgacggggaggaggagatgcgggaAG
TGCGGGGTGTGGACTGGGCGATGGGCACGGAAGGCCCGTGCGGGAGGGAC
CAACTCGTGGCGcggaaggtgctggaggtggagaagatCCGGAGGTATGC
AGCCCCCTTAGTCATGGGAGGGGGCTGTTTTCacgtggacggagagggtA
CGTGTCTGGTCACAGAGGAATCGCTCTTGTCGCCGACGCAGCGGCCAAgc
ctggccaaggaggcggtggaagaggtcTTGCGGAGGTACCTGGGGGTGGA
GCGAGTGATATGGCTGGAGAAAGGCGTGtacggggacgaggacagaCAGG
GACGCGTGGACAGCCTGGCTTGCTTCAAGGGCCCCGGGGAGGTGATCCTT
CACTGGACCGACGACGAGATGGACCCGCAGTTCGACCGATCCTGGTCAGC
CTTTATCCGCCTGACGCAAGCCACCGACGCCAAAGGCCGAGCGCTCCGGA
TCCACAAGATGCCCATGCCTGGGCCCATCTTCGACGAGCAAGGGGGTGTG
GAGGGGTCGCTCCTGTCGGGGGCGGGCTGTACGCctgcgggaagggagga
aggaaaggagggagggaaggagaaagggagggaggaagggagggagggca
cgcaCGAAGAGGGAAACGCGCGCATCGTTGGACGCAAGGTGGGCCGGCGC
ATGCCGGCCTCGTACGTGAACTTCTACATAGCCAACGAGGCTATCGTCGT
ACCGCAGTTCATGGATcccaaggacgaggaggccatAGAGCTCCTCCAGT
TCCTGTACCCAGAGCGGCGCGTGATAGGCGTCTGCACGCGGGATCTtctt
cggggggggggcaacaTCCACTGCGTcacgcagcagcagccgacCAACCA
GTTCGATGCGTTTTGA back to top
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