EWM26737.1, cds3895 (CDS) Nannochloropsis gaditana

Overview
NameEWM26737.1
Unique Namecds3895
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:379996..381561 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26737.1
Productagmatine deiminase
Orig transcript idgnl|cribi|Naga_100001g224.8248.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:379996..381561 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004668protein-arginine deiminase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009446putrescine biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007466Peptidyl-Arg-deiminase_porph
Homology
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|585108825|gb|EWM26737.1| (agmatine deiminase [Nannochloropsis gaditana])

HSP 1 Score: 1066.99 bits (2758), Expect = 0.000e+0
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0
Query:    1 MQRLKRHSCPAPVFEVIYSIEKLTLTRHICRNLRDSMSSIAPLSAKGAASMLLFLGFVMGSATVIAAVAIQDLLDLDPILRGWLKKRRNSKGDGSNGSPLKRPVPSFLEAMYLYERKVGWGEVIPSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQPTNQFDAF 521
            MQRLKRHSCPAPVFEVIYSIEKLTLTRHICRNLRDSMSSIAPLSAKGAASMLLFLGFVMGSATVIAAVAIQDLLDLDPILRGWLKKRRNSKGDGSNGSPLKRPVPSFLEAMYLYERKVGWGEVIPSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQPTNQFDAF
Sbjct:    1 MQRLKRHSCPAPVFEVIYSIEKLTLTRHICRNLRDSMSSIAPLSAKGAASMLLFLGFVMGSATVIAAVAIQDLLDLDPILRGWLKKRRNSKGDGSNGSPLKRPVPSFLEAMYLYERKVGWGEVIPSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQPTNQFDAF 521          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|553184269|ref|XP_005854061.1| (agmatine deiminase, partial [Nannochloropsis gaditana CCMP526] >gi|422295001|gb|EKU22300.1| agmatine deiminase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:  164 QTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEG 421
            QTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEG
Sbjct:    1 QTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEG 258          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|653060823|ref|WP_027312148.1| (agmatine deiminase [Balneatrix alpica])

HSP 1 Score: 317.39 bits (812), Expect = 5.740e-101
Identity = 173/398 (43.47%), Postives = 228/398 (57.29%), Query Frame = 0
Query:  125 PSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAM--------GTEGPCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQP 514
            P++PQ DGF MPA W A    W+L+P R D   ++    Q  +A +A AI       V +GV A   E+ARA++  GV++V +ESD  WARD+GPT V    GE      RG+DW          G   P  +D+ VA+++L      RY APL++ GG  HVDGEGTCL T E LL+P + P L KE +E+ LR YL V + IWL++GVY DE   G +D++ CF  PGEVILHWTDDE DPQ+ RS +A+  L+QA DA+GR+L+I KMP PGP++               CT     E +  G E G                V R+ G R+  SYVNF I N  IV P      D++A  LLQ ++PE  ++GV  R++L GGGNIHC+TQQ P
Sbjct:    5 PTTPQADGFSMPAEWAAQQAVWMLWPYRPDNWRNQGLPAQQTFAQVAAAIS--AVTPVWMGVPAAHMEQARAIMPAGVKLVSIESDDCWARDTGPTVVTHSSGE-----CRGIDWGFNAWGGHQGGLYAPWDKDERVAQQMLAAHGFARYQAPLILEGGSIHVDGEGTCLTTAECLLNPNRNPHLNKEQIEDYLRSYLNVSQFIWLDEGVYMDE-TDGHIDNMCCFARPGEVILHWTDDEQDPQYPRSQAAYQVLSQAKDAQGRSLKIWKMPQPGPLY---------------CT-----EAEAQGVEVGTG--------------VPRRAGERLAGSYVNFLITNGRIVFPLLDPATDDQAAALLQEIFPEYEIVGVPAREILLGGGNIHCITQQIP 360          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|1084906780|gb|OGR27797.1| (agmatine deiminase [Desulfobacterales bacterium RIFOXYA12_FULL_46_15])

HSP 1 Score: 312.768 bits (800), Expect = 4.799e-99
Identity = 166/402 (41.29%), Postives = 236/402 (58.71%), Query Frame = 0
Query:  123 VIPSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALL--HPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEG--------PCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQP 514
            +  + P EDGF MP  +  H+ CW+L+P R+D    +    +  ++ +A AI     E V +GV  +  + A+ LL  H  + +VEMESD AW RD GPTF+    GE     VRG+DW     G        P  +D+ +AR V+E   +  Y AP+++ GG  H DGEGT L TE+ LL+P + PSL+K+ +E +L+ YLG+  +IWL +GV  DE   G VD++ CF  PGEV+LHWTDD  DPQ++ S  A  RL++A DAKGRA+ +HK+  PGP+F                     EE K              + E+ N  ++ R+ G R+ ASYVNFYIAN  +V+P F DP DE+A+ L++ ++P+R++I V  R++L GGGNIHC+TQQQP
Sbjct:    4 IFDTLPYEDGFFMPGEFAPHSCCWMLWPERKDNWRLDAGPAKKAFSAVAKAIALF--EPVFMGVSKQGLQTAKHLLSSHSNIILVEMESDDAWMRDVGPTFLKNRQGE-----VRGIDWGFNAWGGLNGGLYFPWDKDEKIARSVMEKTNVNGYKAPIILEGGSIHTDGEGTLLTTEQCLLNPNRNPSLSKDQIEFILKNYLGINTIIWLSQGVVMDE-TDGHVDNICCFSKPGEVLLHWTDDPSDPQYEISEDALKRLSKARDAKGRAITVHKLHQPGPLF------------------MSEEESK--------------SIEKTNPGMI-REKGARLAASYVNFYIANSGVVMPVFDDPHDEDALALVRSIFPKRKIIPVKAREILLGGGNIHCITQQQP 364          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|731334786|ref|XP_010678395.1| (PREDICTED: agmatine deiminase [Beta vulgaris subsp. vulgaris] >gi|870859429|gb|KMT10878.1| hypothetical protein BVRB_5g113750 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.145 bits (788), Expect = 3.573e-97
Identity = 165/401 (41.15%), Postives = 231/401 (57.61%), Query Frame = 0
Query:  127 SPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEE---EMREVRGVDWAM----GTEGPCGRDQ----LVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPK-DEEAIELLQFLYPERRVIGV-CTRDLLRGGGNIHCVTQQQP 514
            +P + G+ MPA WE H+ CW+ +P R D         Q V+A +A AI     E VTV      W  AR  L P VRVVEM  + +W RD+GPTFVVR         ++ + G+DW      G +  C +D     LVARK+LE+EK+ R+   +++ GG  HVDGEGTCL TEE LL+  + P +++E +E+ L++YLGV ++IWL +G+YGD+D  G +D++ CF  PG V+L WTDDE DPQ++RS  A   L+  TDA GR L + K+ +PGP+F                                 EE   G  ++G A+   R+ G R+ ASYVNFY+AN  I+ PQF D K D EA+ +L  ++P+  VI +   R+++  GGNIHC+TQQQP
Sbjct:    6 TPAQHGYWMPAEWEPHSNCWMGWPERPDNWRDAALHAQCVFAKVATAISNF--EPVTVCASPTQWSNARNQLPPNVRVVEMSMNDSWFRDTGPTFVVRKSEPRTGAHVKSLAGIDWTFNSWGGVDDGCYKDWSLDILVARKILEIEKVPRFPHSMILEGGSIHVDGEGTCLTTEECLLNKNRNPHMSREQIEDELKQYLGVRKIIWLPRGLYGDDDTNGHIDNMCCFVKPGVVMLSWTDDESDPQYERSLEALSVLSSTTDANGRKLEVIKLHIPGPLF-------------------------------MTEEEAAGVIQDGEAK--PREPGTRLAASYVNFYMANGGIITPQFGDEKWDNEAVRVLSRVFPDYEVIKIEGAREIVLAGGNIHCITQQQP 371          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|501058662|ref|WP_012110030.1| (agmatine deiminase [Parvibaculum lavamentivorans] >gi|154155548|gb|ABS62765.1| Agmatine deiminase [Parvibaculum lavamentivorans DS-1])

HSP 1 Score: 307.76 bits (787), Expect = 4.170e-97
Identity = 173/401 (43.14%), Postives = 228/401 (56.86%), Query Frame = 0
Query:  123 VIPSSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAMGTEG--------PCGRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPKDEEAIELLQFLYPERRVIGVCTRDLLRGGGNIHCVTQQQPT 515
            ++ ++P+ DGF MPA +E HAG W+L+P R D      +  Q  +  +A AI   G E VTVG     +  ARA+L P +RVVE+ +D +W RD G TFVV   G      VR +DW     G        P  +D LVA K+ E+E++ RY AP+++ GG  HVDGEGT L TEE LL+P + P L++  +E VL  YL +E+++WL  GV  DE   G VD+L CF  PG V L WTDD+ DPQ+D S  AF RL+ ATDA+GR L IHK+  PGP++  +                         +E G  +  EGT          R  G R+ ASYVNFYIAN  + VP F DP D  AI+ +  L P R+V+ V  R++L GGGNIHC+TQQQP 
Sbjct:    4 LLETTPKADGFRMPAEFEPHAGTWMLWPERPDNWRLGAKPAQHAFVAVAEAIS--GGEPVTVGASPRQFANARAMLPPQIRVVEISNDDSWMRDCGATFVVDGKGG-----VRAIDWIFNAWGGLDGGLYFPWDQDDLVASKMAEIERVDRYRAPIILEGGSIHVDGEGTLLTTEECLLNPNRNPGLSRAEIEAVLTDYLNLEKIVWLGLGVVEDE-TNGHVDNLCCFVRPGVVALTWTDDKADPQYDVSHDAFERLSAATDARGRRLEIHKLHQPGPLYITE-------------------------EESGGVDAVEGTQP--------RLPGARLAASYVNFYIANGVVAVPVFGDPHDGAAIDKIAALLPGRKVVAVPAREILLGGGNIHCITQQQPA 363          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|1193735637|ref|XP_020984014.1| (agmatine deiminase isoform X1 [Arachis duranensis] >gi|1193735639|ref|XP_020984017.1| agmatine deiminase isoform X1 [Arachis duranensis] >gi|1193735641|ref|XP_020984021.1| agmatine deiminase isoform X1 [Arachis duranensis] >gi|1193735643|ref|XP_020984024.1| agmatine deiminase isoform X1 [Arachis duranensis] >gi|1193735645|ref|XP_020984025.1| agmatine deiminase isoform X1 [Arachis duranensis] >gi|1193735647|ref|XP_020984026.1| agmatine deiminase isoform X1 [Arachis duranensis])

HSP 1 Score: 308.145 bits (788), Expect = 7.448e-97
Identity = 167/398 (41.96%), Postives = 238/398 (59.80%), Query Frame = 0
Query:  128 PQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVV-RDDGEEEMREVRGVDWAM----GTEGPC----GRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPK-DEEAIELLQFLYPERRVIGV-CTRDLLRGGGNIHCVTQQQP 514
            P   GF MPA WE H  CW+ +P R D         Q V+A +A+AI     E VTV   +  WE AR +L   +RV+E+  + +W RD+GPTFVV R +  +  + + G+DW      G E  C      D LVARK+L VE++ R++  +++ GG  HVDGEGTCL TEE LL+  + P ++K  +E+ L+ YLGV + IWL +G+YGD+D  G +D++ CF  PG V+L WTDDE DPQ++RS  A+  L+  TDA GR   I K+ +PGP++  +    G +   A          K+    K     R+G  ++G AR+     G R+ ASYVNFYIAN  I+VPQF D K D+EA+ +L   +P+ +V+G+  +R+++  GGNIHC+TQQQP
Sbjct:    8 PASHGFHMPAEWEPHTQCWMGWPERPDNWRENAVPAQDVFAKVASAISRF--EDVTVCASSGQWENARRMLPEHIRVLEISMNDSWFRDTGPTFVVKRSESGKAEQTIAGIDWNFNSWGGLEDGCYTDWSLDILVARKILAVERVHRFSHSMILEGGSIHVDGEGTCLTTEECLLNKNRNPHMSKNQIEDQLKTYLGVSKTIWLSRGLYGDDDTNGHIDNMCCFTRPGVVLLSWTDDESDPQYERSMEAYSLLSNETDASGRKFEIIKLHVPGPLYMTEKEAAGVVQVIASKFIFLVLSIKKYNFFKVGCYKRKG--DDGKARL----PGIRLAASYVNFYIANGGIIVPQFGDKKWDDEAVRVLSKAFPDHKVVGIEGSREIVLAGGNIHCITQQQP 397          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|674864984|emb|CDY67890.1| (BnaAnng25490D [Brassica napus])

HSP 1 Score: 306.605 bits (784), Expect = 2.341e-96
Identity = 169/402 (42.04%), Postives = 230/402 (57.21%), Query Frame = 0
Query:  126 SSPQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRD---DGEEEMREVRGVDWAM----GTEGPC----GRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPK-DEEAIELLQFLYPERRVIGV-CTRDLLRGGGNIHCVTQQQP 514
            S P E GF MPA WE HA  W+ +P R+D   H     Q V+  +A AI +   E VTV      WE AR  L   +RVVEM  + +W RDSGPTFVVR          R + G+DW      G E  C      D LV++K+L VE+I R+   +++ GG  HVDGEGTCL TEE LL+  + P ++K+ +EE L+RYLGV+  IWL +G+YGD+D  G +D++ CF  PG V+L WTDDE DPQ++RS  A    + + DA+GR +++ K+ +PGP++  +    G +              +EGG+ K                   R  G R+ ASYVNFYIAN  I+VP+F D K DE+AI +L   YP   V+G+   R+++  GGNIHC+TQQQP
Sbjct:    7 SPPAEHGFYMPAEWEPHAQTWIGWPERQDNWRHNALPAQRVFVDVAKAISKF--EPVTVCASPSQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFVVRKRPLKLSAINRNIAGIDWNFNAWGGAEDGCYNDWTHDLLVSKKILAVERIPRFQHSMILEGGSIHVDGEGTCLATEECLLNKNRNPHMSKQQIEEELKRYLGVKTFIWLPRGLYGDDDTNGHIDNMCCFAKPGVVLLSWTDDETDPQYERSVEALSVFSNSIDARGRKIQVVKLHVPGPLYMTEEEAFGIV--------------QEGGEAK------------------PRIAGTRLAASYVNFYIANGGIIVPRFGDAKRDEDAIRVLSETYPHHSVVGIENAREIVLAGGNIHCITQQQP 374          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|1012006392|ref|XP_015943959.1| (agmatine deiminase isoform X2 [Arachis duranensis])

HSP 1 Score: 305.449 bits (781), Expect = 3.797e-96
Identity = 164/398 (41.21%), Postives = 233/398 (58.54%), Query Frame = 0
Query:  128 PQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVV-RDDGEEEMREVRGVDWAM----GTEGPC----GRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPK-DEEAIELLQFLYPERRVIGV-CTRDLLRGGGNIHCVTQQQP 514
            P   GF MPA WE H  CW+ +P R D         Q V+A +A+AI     E VTV   +  WE AR +L   +RV+E+  + +W RD+GPTFVV R +  +  + + G+DW      G E  C      D LVARK+L VE++ R++  +++ GG  HVDGEGTCL TEE LL+  + P ++K  +E+ L+ YLGV + IWL +G+YGD+D  G +D++ CF  PG V+L WTDDE DPQ++RS  A+  L+  TDA GR   I K+ +PGP++                      E +  G  +G         ++G AR+     G R+ ASYVNFYIAN  I+VPQF D K D+EA+ +L   +P+ +V+G+  +R+++  GGNIHC+TQQQP
Sbjct:    8 PASHGFHMPAEWEPHTQCWMGWPERPDNWRENAVPAQDVFAKVASAISRF--EDVTVCASSGQWENARRMLPEHIRVLEISMNDSWFRDTGPTFVVKRSESGKAEQTIAGIDWNFNSWGGLEDGCYTDWSLDILVARKILAVERVHRFSHSMILEGGSIHVDGEGTCLTTEECLLNKNRNPHMSKNQIEDQLKTYLGVSKTIWLSRGLYGDDDTNGHIDNMCCFTRPGVVLLSWTDDESDPQYERSMEAYSLLSNETDASGRKFEIIKLHVPGPLY--------------------MTEKEAAGVVQG---------DDGKARL----PGIRLAASYVNFYIANGGIIVPQFGDKKWDDEAVRVLSKAFPDHKVVGIEGSREIVLAGGNIHCITQQQP 370          
BLAST of EWM26737.1 vs. NCBI_GenBank
Match: gi|1012252423|ref|XP_015943982.1| (agmatine deiminase [Arachis duranensis] >gi|1193812306|ref|XP_020989963.1| agmatine deiminase [Arachis duranensis])

HSP 1 Score: 303.523 bits (776), Expect = 2.134e-95
Identity = 162/397 (40.81%), Postives = 232/397 (58.44%), Query Frame = 0
Query:  128 PQEDGFCMPAAWEAHAGCWLLFPCRRDRRAHELEGVQTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVVRDDGEEEMREVRGVDWAM----GTEGPC----GRDQLVARKVLEVEKIRRYAAPLVMGGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYGDEDRQGRVDSLACFKGPGEVILHWTDDEMDPQFDRSWSAFIRLTQATDAKGRALRIHKMPMPGPIFDEQGGVEGSLLSGAGCTPAGREEGKEGGKEKGREEGREGTHEEGNARIVGRKVGRRMPASYVNFYIANEAIVVPQFMDPK-DEEAIELLQFLYPERRVIGV-CTRDLLRGGGNIHCVTQQQP 514
            P   GF MPA WE H  CW+ +P R D         Q V+A +A+AI     E VTV   +  W  AR +L   +RV+E+  + +W RD+GPTFVV+   E   + + G+DW      G E  C      D LVARK+L +E++ R++  +++ GG  HVDGEGTCL TEE LL+  + P ++K  +E+ L+ YLGV ++IWL +G+YGD+D  G +D++ CF  PG V+L WTDDE DPQ++RS  A+  L+  TDA GR   I K+ +PGP++                      E +  G  +G         ++G AR+     G R+ ASYVNFYIAN  I+VPQF D K D+EA+ +L   +P+ +V+G+  +R+++  GGNIHC+TQQQP
Sbjct:    7 PASHGFHMPAEWEPHTQCWMGWPERPDNWRENAVPAQDVFAKVASAISRF--EDVTVCASSGQWGNARRMLPEHIRVLEISMNDSWFRDTGPTFVVKR-SESGKQTIAGIDWNFNSWGGLEDGCYTDWSLDILVARKILAIERVHRFSHSMILEGGSIHVDGEGTCLTTEECLLNKNRNPHMSKNQIEDQLKTYLGVSKIIWLPRGLYGDDDTNGHIDNMCCFTRPGVVLLSWTDDESDPQYERSMEAYSLLSNETDANGRKFEIIKLHVPGPLY--------------------MTEKEAAGVVQG---------DDGKARL----PGTRLAASYVNFYIANGGIIVPQFGDKKWDDEAVRVLSKAFPDHKVVGIEGSREIVLAGGNIHCITQQQP 367          
The following BLAST results are available for this feature:
BLAST of EWM26737.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108825|gb|EWM26737.1|0.000e+0100.00agmatine deiminase [Nannochloropsis gaditana][more]
gi|553184269|ref|XP_005854061.1|0.000e+0100.00agmatine deiminase, partial [Nannochloropsis gadit... [more]
gi|653060823|ref|WP_027312148.1|5.740e-10143.47agmatine deiminase [Balneatrix alpica][more]
gi|1084906780|gb|OGR27797.1|4.799e-9941.29agmatine deiminase [Desulfobacterales bacterium RI... [more]
gi|731334786|ref|XP_010678395.1|3.573e-9741.15PREDICTED: agmatine deiminase [Beta vulgaris subsp... [more]
gi|501058662|ref|WP_012110030.1|4.170e-9743.14agmatine deiminase [Parvibaculum lavamentivorans] ... [more]
gi|1193735637|ref|XP_020984014.1|7.448e-9741.96agmatine deiminase isoform X1 [Arachis duranensis]... [more]
gi|674864984|emb|CDY67890.1|2.341e-9642.04BnaAnng25490D [Brassica napus][more]
gi|1012006392|ref|XP_015943959.1|3.797e-9641.21agmatine deiminase isoform X2 [Arachis duranensis][more]
gi|1012252423|ref|XP_015943982.1|2.134e-9540.81agmatine deiminase [Arachis duranensis] >gi|119381... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3904rna3904Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications