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Properties
| Property Name | Value |
|---|
| Product | ubiquitin carboxyl-terminal hydrolase 15 isoform 2 |
| Orig transcript id | gnl|cribi|Naga_102446g1.8967.mrna |
| Orig protein id | gnl|cribi|Naga_102446g1.8967 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:376245..377082 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3902 ID=rna3902|Name=rna3902|organism=Nannochloropsis gaditana|type=mRNA|length=871bp
TTTGATAGGAAAGGGCGATTGGGACCACCACCACCATGACTTGACGTTGT
TGCAGAACGTTAAAAAATAAACGCGAGACGCACCTACGGAAATGACGTCC
CCTAATGCTGCAGCAATACATTTGAGGGAAGAAGGCCTTGCAAAATCTGG
GCGGCGGGACTACAGGGGTGCCATCGCTGCCTACGATGAGGCTATCCAAC
TTTATAGAGACTTACCACGCCTTAACGCATCCTGTCGCGAGGACCTGGTG
CTGTGCTGGATGAAGCGTGCCGAGGCATATTTCCGTCTCAAGGAATATGA
AGCATGCATAGAGGACTGCACCCGCGTCCTGGCCGTCCATCCAGGCCTCG
TGGAAGCTCGTCTGCGACAGGAATACGCCCGGCAAAGCTTGGAATTGCAG
AAGGGACGCTCGGAGGAGGCGGTGCATTCCCACAGGAACGGCCTGAACGG
GCGTAGGAAGCCCGAGAAGAAGGGCATGAAAAAAGGAGAGCCGTGGGTGG
CACCGAGCGAAGCCTCTCAGGCCTCGAGCCCCCCTTCTCCCACGCGCGTC
CCCCGCCCTCCCCTCCCCCTCCCTCCCCACCCCGGAGGCACCGAAAGGGA
AGGACCCACGGCCTGGAAGAAGAGGTAACGAACGGACAGAGCGCTTCTCG
CATATCCTTGGGGGGTTCCGGAGAAGCTGCATGGGCAGACTCATCCCCCT
CCGCCCCCATCAACCCGCCCGCCGGAACCGCCGACGGCAACCAGAACGGC
TTGGGAGCCCTCCCGCGAGGGGGTTCAGCACCCTCCCCCGCGGAGCAGGC
CCTGATCGTGCGACGGCTGCTGATGCAGACCGGAAGGCTGGGCTCGGAGC
CTGGGGACGTGTGGGCGGTGC back to topprotein sequence of rna3902 >rna3902-protein ID=rna3902-protein|Name=rna3902|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
PLPGRRGSVGLVNLGNTCYLNSAVQCLAHTLPLTRYFLAHRLAEDLNPSS
PLGSGGRVARAYERLVKEMWFGEARVCNPQALKAAVTRFSPPSLLAMPST
TPTSSWSSSWTSSTRT back to topmRNA from alignment at CM002462.1:376245..377082+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3902 ID=rna3902|Name=rna3902|organism=Nannochloropsis gaditana|type=mRNA|length=838bp|location=Sequence derived from alignment at CM002462.1:376245..377082+ (Nannochloropsis gaditana)
CCGCTCCCCGGTCGGCGCGGGAGCGTGGGCCTGGTCAACCTGGGCAACAC
CTGCTACCTTAACTCGGCCGTCCAGTGCCTGGCGCACACCCTGCCCCTCA
CGCGCtacttcctcgcccaccggCTCGCGGAGGACTTGaacccgtcctcc
ccactGGGGTCGGGGGGCCGCGTGGCTCGGGCCTACGAGAGACTGGTGAA
GGAGATGTGGTTCGGGGAGGCGCGCGTCTGCAACCCACAGGCGCTCAAGG
CGGCCGTGACCCGATTTTCCCCCCCAAGTTTACTGGCCATGCCCAGCACG
ACGCCCACGAgctcctggtcctcctcttggaCAAGCTCCACGAGGACTTG
AACCGCGTCCGGCAGAAGCCGTACGTGGAGGCCCGGGACTTGGACCCCGC
CCGGTCCCaggcggcgcaggcggcggaggcctGGGCCCAGGTGCGGGCGC
GGGACGAGagcgtggtggtggacttGACCTGGGGGCTGCTGCGGAGCACC
CTCGTCTGCCCCGCCTGCGGGCACGTCTCTGTGGCTTTCGACCCCTTCCA
TTGCTTGACGCTGGAGATGCCCGCCTGGGAAGGGCGCCAGCGGGTGGAGG
TGTTGGTGTGGCcgcgggtgggggaggcagaagggcgggggagggaggga
ggggcaacggacgccggcctcccccgcctggtcGTGCTCGACTTGCCCCG
CCGGGCTCTGGTCCGAgacttgaaggaggagctggaggcgatTTGCGGCG
TGCGTCATGAGGACCTCTATGTGGGTGTGGTGCGGGAGCGATCCCTGGAC
CGGTTTTTGAGCGACCTGGTGCCGGTGgcgcgggtgga back to topCoding sequence (CDS) from alignment at CM002462.1:376245..377082+ >rna3902 ID=rna3902|Name=rna3902|organism=Nannochloropsis gaditana|type=CDS|length=351bp|location=Sequence derived from alignment at CM002462.1:376245..377082+ (Nannochloropsis gaditana)
CCGCTCCCCGGTCGGCGCGGGAGCGTGGGCCTGGTCAACCTGGGCAACAC
CTGCTACCTTAACTCGGCCGTCCAGTGCCTGGCGCACACCCTGCCCCTCA
CGCGCtacttcctcgcccaccggCTCGCGGAGGACTTGaacccgtcctcc
ccactGGGGTCGGGGGGCCGCGTGGCTCGGGCCTACGAGAGACTGGTGAA
GGAGATGTGGTTCGGGGAGGCGCGCGTCTGCAACCCACAGGCGCTCAAGG
CGGCCGTGACCCGATTTTCCCCCCCAAGTTTACTGGCCATGCCCAGCACG
ACGCCCACGAgctcctggtcctcctcttggaCAAGCTCCACGAGGACTTG
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