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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100018g4.2810.mrna |
| Orig protein id | gnl|cribi|Naga_100018g4.2810 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:367527..369582 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3898 ID=rna3898|Name=rna3898|organism=Nannochloropsis gaditana|type=mRNA|length=3946bp
TGGCGGGATATCTCACGCATTTCATTACCTTTACCATATTCATTAGGTGT
GCTGAACTGGATTTTCGCCAGAGTAGGTGTATTCGACGTTGTCCAATCAG
CATGGCACGAACGGGTTTCCCTTTGCGCAGTCGGCGGCGGAGGCAGCGGA
CTTCGACCGTCGTTACATTACGAGCTTTTATTCCTCTGTTGTGGCTGAGT
GCAGAGATGGTTATGGCTTTTGTGGGTCCTTCGATCTCGGTCTCCCCTCT
TGCGCGGGCAGCTCCTCGGAGAGCGGTAGGAATGATGGCCACCCCCCCCT
CAAACCAGGCGCCCCGCAAACCGCCAGGAAGTTTCGTGGGCCGAATTTTA
CGACGAGTACTTGGGACTGTGGGCGGCGTAGTTGGTCTATCGGTGGCCCC
TCTACCGCGTGAGAAAGTTGAGGAAGTGCTGTCCAACCCGGAAGCGGCCT
TCCAGCAATTGGCGGAGGTGGACGTGAGCGCCACGATGCGCGAGACGGCT
GATGATTTGAGGAGGACACTTGAATCGATTGATCTCTCGTCCCCCTCAGG
GATTGCGAGCCTAGACTATGAATCAACCATGAAGATGCTTGCATCCAAGG
CAAGCAGCTTTACATCATTCGTGCAAGAATCAGTCGATCATATAGGGGAG
GTGGATCTTGCGTCCCTTATGGAGCTTGTGAAAGCGGGAAACTTCATAGA
GGCCGTGACCCGAGCCACGGGGGCAGATACCGTCGCGACAAGTGAAGCGT
TGCAGGGCAAAGGGGCCGAGTGGTTCGCGGCGTTGGACGGGCGCGTTGAG
GAGGCAGCGAATGGCCTTGGTGACATGCTGGGGGGTGCCAACGGAGTGCT
CCCGGAGGGTCTTGCCGCACAAGACATGACGCGATCCGTAGCTTTTTTCC
TCAAGCAAGCGGCCGTCAACCCGGCGCTGCGCATGCAGACGGAAGAAACC
TTGGCCGGCGTGCTTGTCGCCGGCCTGGGACTGTCTGCGGCCAGAGCCCT
CTTTGACGCCAGGTCGAGTCTGGGGGCCGCCATGACGGGCCCGCCCACCG
TGTACGACCCGGCGCTCATTGACGCCTACTTCGGCGCCCGGCCCCGCAAA
GTCCTGAACCGCCTGGTCAGCGGTCTTACCAGTGCGAGCAGCTTCCTCTC
GGGTCTGCTCGTGGATTATGTGATGGCGACAGGGGAAGAGAAGGCCTCAG
AGCGGGCGAAGCAGTTGACGGCCCTCATCACGGAGCTGGGGCCTGTCTTT
ATCAAGGTCGCACAACTCATATCAGTCCGTCCTGACATCGTCGGGCCCGT
GTACCTGAAAGAACTCCAGTCCCTGCAGGACCAAGTACGGCCTTTCTCTT
CCCGCGAGGCCAAGAAGATCATCGCCGCCAACCTGCCCAAGGGGACCGCT
TTGAAGGACGTGTATAAGAATCCTGACACGGATTTCTATGAGCCCGTGGC
GGCAGCGAGCCTGGGGCAGGTGTACCGGGCGGAGCTTGTGGACGGGAAGG
TGGTGGCGGTGAAGGTGCAGCGCCCGAACATGCTGGAGACCATCACCTTG
GACCTTTATACCATCCGGTTGCTCTGCAACGTTGGCAAGACCATTCCCCG
CTTCCAAGCCAGCTGCACGAGTTTCATCGAGGTTCTGAACAACTGGGGAG
GCAGATTTCAGCAGGAGATCGATTACGTACAGGAGAAGAAGAATACCCGG
AAGTTCGCCAAAGCCATGGGGGCTTTCCCGCTCGTGAAAGACGCCGTTGT
GGTGCCGGAGGTGTATGAGACCATCTCCTCGAGGGACGTGCTGGTCACGG
AATGGATCGAGGGGCGGAAGATTCAGTCCTTCGACAAAAGCGACCCGAAT
GACAAGGAAAAGCTGGAGAAGATCCTGGCGGTGATGTTGAACAGCTACCT
GGTCCAACTCCTGGACACCGGCATCTTGCACGCGGACCCCCATGCAGGCA
ATTTCCTCGTCACTCCGGATGGACGTCTGGCCATCCTTGACCATGGCTTG
GTCACCGAGATCGACGCGGACCGACGACTTGCTCTCATAGAGTACGTGGC
GCATTTGACGGCGCAAGACTGGGAGGCTACTGTATGCGATCTTGTCCGTC
TGGGGTTCATACCGCAAGAAATTGCGGACGATAAAAAGAAGCTAGGCATT
GTCGCTCCGATATTGGGCTCGGTATTGGAGCAGTTGAGCAACGGTGGAGG
CGCCAAGGCGGTGAATGTAGACGAGATCGGCGATCAGGTCGAGTCCCTCG
CTGAGCAGTACCCGCTGACTATTCCCCCCTGGTTTGGACTGATTGTGCGC
GCATTTAGCGCCATAGAAGGTTTGGGGCTGGGCCTTTCTCCCACTTACTC
CATCGTCAACCAATGCTTTCCTTTCCTGGCTAGACGCCTTCTGACGGACG
ACTCACCTCGTATCCGTGCCGCCCTAAAATCGTTTTTGTACGGGAACGAC
AAGCAGCTGAAAGTAGAGCGTGTCAACGACATGATAGAGGGATACCGAAA
CTTTACAAATTCGTTCGACGATATGGCCGTGACGGTGGGGGGGTCCCCGA
TTGTGTCCTCGTCCACTGCCCCCTCTTTCGCCGCTACCTCCTTGCCCAGT
CGTGAGCGGCTCATGGCTCTCGGCAGCAGCGGCAGTGGAAAAGGAGGGAA
AGGGTACTTGGATTTCGATAAGCCCACCATGGAGGTTCTTCAAATCCTTT
TTCATAAGGATGGCAATTTTGTCCAAGAGCTGGTCACAGACGAGTTGGTC
CGGATGGCGGACGCTGTTATCAAGGAAGTGACTGGCTTGGCGGCTCGTCG
TGCTAAGACGACACCCTTAGCCCTTTCCAGCAATCTTCGCCGTCTTCCTG
GGCCACTGGGAAATCTTGCGCTTGTCCCTTTTATTCCCATTATCTCCTTG
TTAGGCCTTTTCACAGCGCTAGCAGAGCGGGCTGAAACGCTCTCGCAATT
AACAGAAGAGGACAGAGAAAGTCTGAAGACACTGCGCTTACTTTTGGGTG
CTGTGAGCGTACAAGCACCCCTAGACGAGACAAGGAGTGGCAATGGCATG
AATAGAAGCCCATTTCCCTTCCCCTTCCCTCCTCCGCCACCGTTCCTGTT
CCCCTTTCCCGGTCGCGGCAGTGGCAGCAACAACAATTTTCCATTCTCTT
TCCCGCCTCCGTTACCACCATTCGGCCCTTCCGCTAACAGCATCGCATTT
ATCGAAACAGCTCTGGGTGTGTCGCGTCAGGTCCTCCCCGAAATCGCGCC
TGGCGTGGCTGCTATAGGTCGTCGATTCTTGGCCCAGTTAACTGGTCGGG
TATTGAACAGACTCGCAGATGAGTTGGAGGGACAAGGAAATAGACTGTAG
ACATGCAGCTGCAATAAAGAAGCATTGCGTGTACGTGGAAGTTGAAGAAT
AATAGGAATGTAAGCTTTTCAGGAGCGATACCGCATGTATGATACGGAGA
AGCACACGATAAGGCGAAAAATCATGTGAAAGGATTTTTGTGTGAAAGGA
CCAGTTAAAATTCTCATAACATGAATGTTTTGTTTCTAATTGACAAGTCT
CAGGCGCTGGATAATTCGTTCCAATCAAGCCAGGGATATCTTTAATCTGT
AAGTATTTCTTTCAAGCAGTTGCGATTCTCAACTCTACATCAGCAGGCGG
AAGTAACCCTATAGAACGCAGATTCTTTACAATATTGAATAAAGCATCTT
CTGCTATGCGACGGTAACACGGCCACAAAGTGCTCCGATTAAAGGCATTT
GTCGCAAATGAAGACATTTGAGAAAGCTTTGTCCACAGTTCACTAAGCAG
AAGCTGCGCCAAACGGGAACATTCGACGAGCACATCAACTAAGAATCCTA
TAATGTGCGCAATCACTGACAAGATACTAACTAAACAGAGGATGAGAGTA
GGGAGCAGGTCTGCAGAGTAGTAGAGCGGCAAGAATACCACGGCAG back to topprotein sequence of rna3898 >rna3898-protein ID=rna3898-protein|Name=rna3898|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIE
DCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPA
FVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTR
NHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLV
GSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSA
HVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSR
LAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRS
IGLLPPADVELRIATA back to topmRNA from alignment at CM002462.1:367527..369582- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3898 ID=rna3898|Name=rna3898|organism=Nannochloropsis gaditana|type=mRNA|length=2056bp|location=Sequence derived from alignment at CM002462.1:367527..369582- (Nannochloropsis gaditana)
ACACATTCCAATCGTAAACACAGGAACGCACAGCAGCTCCCCGAGGGACC
CCACGTCGCTTTCCTTCGATTGCTGTGGTGCAACACAGAGGCATTAAAGT
CATAGCAAGATCGAGTGTACGCCGAAATAAGATGGTCCGACCTCTCATTT
CTCCCATTGCATTTGCCACAAACGCATCGACTACCGTACCGCCTGTACGT
GATTCACAAACTGCGATACAAAGTCCGTCCAAGACCACGCCCCGTTCGCC
AGTACCTATTGTTCTCAGTCCCGCAGGCAATCCATGTGTCATTTGTTTTG
ATCTAGAACGTGACGGCGTAATATGCTCGCAGAATCACTTCGTATGCCGT
GGATGCCTTCAGGTAATAAAATCGAGGGGTCTCCGGAAACAGATGCAAAT
GCGAAGAGATATCGTATGAAATGGTATCGTTTTTTCTTCATGTCAAAACT
GCGTGCACACGTCAACGCTCAGCATAGAATAGGCAAAATTGAGCAACGCT
GATGTTAATTTTTTAATGTTTTTAGGGCTTTATCTGCAACTTGGAGCCTG
TCACCATTCGCCGGAGCGGAGGCTGTGTGACCTGCCCGGCCATAGACGCA
ATCACTAACCAAACTTGTTCTGCAGAACCTTGGAGTTATGATGATCTCGT
GAATCTTCTCGACCCAGGCACCCAACGAAAATATGTGCAGCGCCTCGAAG
GCTTGTTGACCACTGTCCTTTCGGAAGAGAGGGCTGTTTCTGGGGAAGCG
CCACTTTCTCCCTATCGTGGAAGTGTGGGCCGTAGACAGCGATCTCACTT
GCCAAAGAGTGAACCACCAGCAGCTCCTTCTCTGTGGGAGGAATCCAGAT
CTCAACCTTTCGATTTGAAAATGAGCACTTGTCGGCAACACATCGCGGAG
GAAATTCTGACCTTGAAGTGCCCGCGGAAAGGTTGCCGTCGGGCGTTCCT
AGATTTCGATGGTTGTTTTGCTTTGACGTGTCCGAGGTGTGGGTGTGGAT
TTTGTGCGGCTTGTATTGAGGACTGCGGAGATGACGCCCATAATCACTGT
CGAGACGTGCACTATGGCGTGTTTGGCACTTTGGAAAGATTTAACGACAT
TCAACGAAAACGTCGGTTAGTGGGGGTGACAGAATACCTGAAATGGATTT
CACAGCAAGAGTCCCCAGCCTTTGTCAGCAAAGTGCTGGAGTCGCGTGGC
CCCGTTTCCCAGGATCTAGCCGATGTCGGCATACAAGTCGAGGAAGTCAA
GAAAGTCTTGAACGGAGGCCAGGTCCCGTCCCTGGACATGAACGCCTCTA
TAGGACTGTTCAGTACTCGTAATCACACAAACGATCAATCATGGATTAGT
CGATGGCTCCGTCGTTTGCTAGATGGCCCGGGATACGCGCCGGAGGACGA
CATCACGTCTCGCCTACTCGGAAATATCACGACTGGTATGCTGATCCTTG
CAGGCGTGCACGGCTTAGTTGGATCACCTTCTCATGACACCGATGCTCCT
TATGGATATGGCATGTGGTATTTTTTGGGGGGAATGACAAAATTATTTTA
CGGCCTTATGGCTGCACCGCCAGCCTGCTTGTTATTGACCGGCCGAGGCA
AACAACTATTGCAATCTGCACATGTAGCTTTCCTTACTGCCGTGGTATTC
TTGCCGCTCTACTACTCTGCAGACCTGCTCCCTACTCTCATCCTCTGTTT
AGTTAGTATCTTGTCAGTGATTGCGCACATTATAGGATTCTTAGTTGATG
TGCTCGTCGAATGTTCCCGTTTGGCGCAGCTTCTGCTTAGTGAACTGTGG
ACAAAGCTTTCTCAAATGTCTTCATTTGCGACAAATGCCTTTAATCGGAG
CACTTTGTGGCCGTGTTACCGTCGCATAGCAGAAGATGCTTTATTCAATA
TTGTAAAGAATCTGCGTTCTATAGGGTTACTTCCGCCTGCTGATGTAGAG
TTGAGAATCGCAACTGCTTGAAAGAAATACTTACAGATTAAAGATATCCC
TGGCTTGATTGGAACGAATTATCCAGCGCCTGAGACTTGTCAATTAGAAA
CAAAAC back to topCoding sequence (CDS) from alignment at CM002462.1:367527..369582- >rna3898 ID=rna3898|Name=rna3898|organism=Nannochloropsis gaditana|type=CDS|length=1101bp|location=Sequence derived from alignment at CM002462.1:367527..369582- (Nannochloropsis gaditana)
ATGAGCACTTGTCGGCAACACATCGCGGAGGAAATTCTGACCTTGAAGTG
CCCGCGGAAAGGTTGCCGTCGGGCGTTCCTAGATTTCGATGGTTGTTTTG
CTTTGACGTGTCCGAGGTGTGGGTGTGGATTTTGTGCGGCTTGTATTGAG
GACTGCGGAGATGACGCCCATAATCACTGTCGAGACGTGCACTATGGCGT
GTTTGGCACTTTGGAAAGATTTAACGACATTCAACGAAAACGTCGGTTAG
TGGGGGTGACAGAATACCTGAAATGGATTTCACAGCAAGAGTCCCCAGCC
TTTGTCAGCAAAGTGCTGGAGTCGCGTGGCCCCGTTTCCCAGGATCTAGC
CGATGTCGGCATACAAGTCGAGGAAGTCAAGAAAGTCTTGAACGGAGGCC
AGGTCCCGTCCCTGGACATGAACGCCTCTATAGGACTGTTCAGTACTCGT
AATCACACAAACGATCAATCATGGATTAGTCGATGGCTCCGTCGTTTGCT
AGATGGCCCGGGATACGCGCCGGAGGACGACATCACGTCTCGCCTACTCG
GAAATATCACGACTGGTATGCTGATCCTTGCAGGCGTGCACGGCTTAGTT
GGATCACCTTCTCATGACACCGATGCTCCTTATGGATATGGCATGTGGTA
TTTTTTGGGGGGAATGACAAAATTATTTTACGGCCTTATGGCTGCACCGC
CAGCCTGCTTGTTATTGACCGGCCGAGGCAAACAACTATTGCAATCTGCA
CATGTAGCTTTCCTTACTGCCGTGGTATTCTTGCCGCTCTACTACTCTGC
AGACCTGCTCCCTACTCTCATCCTCTGTTTAGTTAGTATCTTGTCAGTGA
TTGCGCACATTATAGGATTCTTAGTTGATGTGCTCGTCGAATGTTCCCGT
TTGGCGCAGCTTCTGCTTAGTGAACTGTGGACAAAGCTTTCTCAAATGTC
TTCATTTGCGACAAATGCCTTTAATCGGAGCACTTTGTGGCCGTGTTACC
GTCGCATAGCAGAAGATGCTTTATTCAATATTGTAAAGAATCTGCGTTCT
ATAGGGTTACTTCCGCCTGCTGATGTAGAGTTGAGAATCGCAACTGCTTG
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