EWM26830.1, cds3889 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|585108921|gb|EWM26830.1| (hypothetical protein Naga_100018g4 [Nannochloropsis gaditana]) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query: 1 MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA 366
MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA
Sbjct: 1 MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA 366
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|514692573|ref|XP_004993859.1| (hypothetical protein PTSG_05285 [Salpingoeca rosetta] >gi|326428007|gb|EGD73577.1| hypothetical protein PTSG_05285 [Salpingoeca rosetta]) HSP 1 Score: 100.523 bits (249), Expect = 2.209e-19 Identity = 50/94 (53.19%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 2 STCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVH--YGVFGTLERFNDIQRKRRLVGVTEYL 90
R+HI EILTL+CPR C+ AF+DFDGCFALTC C CGFCA C+ DCG +AH C H G GT ++FND RKRR + EY+
Sbjct: 1612 EEARKHITGEILTLRCPR--CKTAFVDFDGCFALTCNNCKCGFCAWCLRDCGTNAHQCAARCGTRHGGRGYHGTEQQFNDHHRKRRQRLLDEYM 1703
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|167535916|ref|XP_001749631.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772023|gb|EDQ85682.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 96.6709 bits (239), Expect = 3.688e-18 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVHYGV---FGTLERFNDIQRKRRLVGVTEYLKWISQQ 96
R+HI E+ILTL CPR C+ AF DFDGCFAL+C RCGCGFCA C+ DCG DAH C ++ G FGT E+F+ +RR V YL+ + Q+
Sbjct: 118 RKHIVEKILTLACPR--CKTAFFDFDGCFALSCGRCGCGFCAWCLTDCGADAHGCAARCGQLYGGTDRYFGTREQFDAHHSRRRQDLVKAYLRTLPQK 213 HSP 2 Score: 92.0485 bits (227), Expect = 1.215e-16 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVHYGV---FGTLERFNDIQRKRRLVGVTEY 89
R+HI E+ILTL CPR C+ AF DFDGCFAL+C RCGCGFCA C+ DCG DAH C ++ G FGT E+F+ +RR V Y
Sbjct: 548 RKHIVEKILTLACPR--CKTAFFDFDGCFALSCGRCGCGFCAWCLTDCGADAHGCAARCGQLYGGTDRYFGTREQFDAHHSRRRRDLVEAY 636
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|612399298|ref|XP_007515168.1| (predicted protein [Bathycoccus prasinos] >gi|412993536|emb|CCO14047.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 95.9005 bits (237), Expect = 4.685e-18 Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHC----------------------RDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVL 130
++H+ E++LTL CPR C +AF+DFDGCFAL C RC GFCA C+ DCG DAH H R G +G+ F++ QR RRL +T Y + ++ FV++VL++ + ++L D+ + ++V+K L
Sbjct: 136 KEHVIEKVLTLSCPR--CEQAFVDFDGCFALRCARCQAGFCAYCLADCGRDAHAHIGGCELGKQVTKWAQKNKSTVNNRGHPPGTYGSPAAFDESQRLRRLRDLTSYFELKEEK----FVTEVLDA---LEKELKDLNLTKKDVQKSL 274
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|514683533|ref|XP_004989348.1| (hypothetical protein PTSG_09987 [Salpingoeca rosetta] >gi|326433693|gb|EGD79263.1| hypothetical protein PTSG_09987 [Salpingoeca rosetta]) HSP 1 Score: 88.9669 bits (219), Expect = 9.182e-16 Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAH---NHCRDVH--YGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVE 124
R+HI E I TLKCPR C AF+DFDGCFALTC C CGFCA C+ D G+DAH C + + G FGTL F +RR + YL + +P +V+ + +D D+GI+++
Sbjct: 370 RKHIVENIFTLKCPR--CSAAFVDFDGCFALTCAHCKCGFCAWCLTDRGNDAHPCAAQCGEKYGRGGYFGTLREFEQHHVRRRQAELDTYLGTL----TPEVRGRVVTA---CRRDAQDLGIKLQ 485
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|923124091|ref|XP_013755514.1| (serine/threonine protein kinase [Thecamonas trahens ATCC 50062] >gi|906558674|gb|KNC51917.1| serine/threonine protein kinase [Thecamonas trahens ATCC 50062]) HSP 1 Score: 87.8113 bits (216), Expect = 4.227e-15 Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 0
Query: 7 HIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCR-DVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQV 123
H+ E ILTL+CPR C AF DF GC AL C +C FCA C+ DCGDDAH HC + + + + + DIQR RR + + +YL + + A ++ +QD AD+GI +
Sbjct: 1300 HVHEAILTLRCPR--CAAAFFDFTGCAALVCTQCNAAFCALCLADCGDDAHTHVLHCSLNPSEDYYVSNDTYQDIQRARRQLALRQYLASLDADLAAAVTAR-------CAQDCADLGIVI 1411
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|303281941|ref|XP_003060262.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226457733|gb|EEH55031.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 85.5001 bits (210), Expect = 7.299e-15 Identity = 54/155 (34.84%), Postives = 74/155 (47.74%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYG--------------------------------VFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVK 127
R+H+ E+ILTL CPR C +AF+DF+GCFAL C RC FCA C+ DCG DAH H G +GT F++ Q++RR + YL ++ SK+LE V +LAD+GI E++
Sbjct: 184 REHVVEKILTLSCPR--CTQAFVDFEGCFALNCSRCRAAFCAYCLADCGKDAHAHVGSCPEGAASLKAMKSKEKAAGGGGGGGGGARGLAGQGTTYGTRAMFDESQKRRRCKHLVLYL----ERHDGETQSKILEG---VKTELADLGITSRELR 329
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|929749013|ref|XP_014149490.1| (hypothetical protein SARC_11891 [Sphaeroforma arctica JP610] >gi|906940866|gb|KNC75588.1| hypothetical protein SARC_11891 [Sphaeroforma arctica JP610]) HSP 1 Score: 81.6481 bits (200), Expect = 7.480e-15 Identity = 51/138 (36.96%), Postives = 67/138 (48.55%), Query Frame = 0
Query: 6 QHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRD----------VHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLA---DVGIQVEEVKKVL 130
+HI EEIL L+CP+ C + F FDGCFAL C RC GFCA C+ DC DAH H + ++ F T+E F + RR V +Y+ I E +V ES P + L D E +K V+
Sbjct: 41 RHIQEEILNLRCPK--CMQVFTTFDGCFALHCHRCQTGFCAWCLGDCHHDAHGHVSNCIRNPKHGTKTNHQYFNTIECFEQVHIMRRGKAVVQYVANI---EDKRIAREVAESIKPECKRLGFSLDYAASEEALKSVM 173
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|929755662|ref|XP_014152813.1| (serine/threonine protein kinase [Sphaeroforma arctica JP610] >gi|906947817|gb|KNC78911.1| serine/threonine protein kinase [Sphaeroforma arctica JP610]) HSP 1 Score: 87.0409 bits (214), Expect = 8.022e-15 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 6 QHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCR---------DVHYGVFGTLERFNDIQRKRR 82
++IA++ILT+KCPR+G AF+DF GCFAL C C C FCA C++DCG DAH H R D +YG T FN R RR
Sbjct: 1784 RYIADDILTIKCPRQG--HAFIDFTGCFALKCHACDCHFCAYCLQDCGRDAHAHVRQCAMKPPGADEYYGQLST---FNKQMRDRR 1864
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|922860143|gb|KOO28070.1| (kinase family protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 85.8853 bits (211), Expect = 1.363e-14 Identity = 53/133 (39.85%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCG-----CGFCAACIEDCGDDAHNHCRDVHY------GVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEV 126
R HI E IL CPR C +AF+DFDGCFAL+C R G CGFCA C+ D DAH H + + GV+ +LE F + QR+R + EYL + A ++ L +QDL +GI E+
Sbjct: 752 RHHIVERILNPACPR--CGQAFVDFDGCFALSCSRVGCSLPACGFCAYCLHDANGDAHAHVAECRHNIAPGRGVWASLEIFKEAQRRRCTRMIREYLATLDA----ASRARALRD---CAQDLRGLGIAPNEI 875 The following BLAST results are available for this feature:
BLAST of EWM26830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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