EWM26830.1, cds3889 (CDS) Nannochloropsis gaditana

Overview
NameEWM26830.1
Unique Namecds3889
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:367612..368712 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26830.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100018g4.2810.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:367612..368712 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|585108921|gb|EWM26830.1| (hypothetical protein Naga_100018g4 [Nannochloropsis gaditana])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA 366
            MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA
Sbjct:    1 MSTCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVLNGGQVPSLDMNASIGLFSTRNHTNDQSWISRWLRRLLDGPGYAPEDDITSRLLGNITTGMLILAGVHGLVGSPSHDTDAPYGYGMWYFLGGMTKLFYGLMAAPPACLLLTGRGKQLLQSAHVAFLTAVVFLPLYYSADLLPTLILCLVSILSVIAHIIGFLVDVLVECSRLAQLLLSELWTKLSQMSSFATNAFNRSTLWPCYRRIAEDALFNIVKNLRSIGLLPPADVELRIATA 366          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|514692573|ref|XP_004993859.1| (hypothetical protein PTSG_05285 [Salpingoeca rosetta] >gi|326428007|gb|EGD73577.1| hypothetical protein PTSG_05285 [Salpingoeca rosetta])

HSP 1 Score: 100.523 bits (249), Expect = 2.209e-19
Identity = 50/94 (53.19%), Postives = 60/94 (63.83%), Query Frame = 0
Query:    2 STCRQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVH--YGVFGTLERFNDIQRKRRLVGVTEYL 90
               R+HI  EILTL+CPR  C+ AF+DFDGCFALTC  C CGFCA C+ DCG +AH     C   H   G  GT ++FND  RKRR   + EY+
Sbjct: 1612 EEARKHITGEILTLRCPR--CKTAFVDFDGCFALTCNNCKCGFCAWCLRDCGTNAHQCAARCGTRHGGRGYHGTEQQFNDHHRKRRQRLLDEYM 1703          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|167535916|ref|XP_001749631.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772023|gb|EDQ85682.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 96.6709 bits (239), Expect = 3.688e-18
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVHYGV---FGTLERFNDIQRKRRLVGVTEYLKWISQQ 96
            R+HI E+ILTL CPR  C+ AF DFDGCFAL+C RCGCGFCA C+ DCG DAH     C  ++ G    FGT E+F+    +RR   V  YL+ + Q+
Sbjct:  118 RKHIVEKILTLACPR--CKTAFFDFDGCFALSCGRCGCGFCAWCLTDCGADAHGCAARCGQLYGGTDRYFGTREQFDAHHSRRRQDLVKAYLRTLPQK 213          

HSP 2 Score: 92.0485 bits (227), Expect = 1.215e-16
Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCRDVHYGV---FGTLERFNDIQRKRRLVGVTEY 89
            R+HI E+ILTL CPR  C+ AF DFDGCFAL+C RCGCGFCA C+ DCG DAH     C  ++ G    FGT E+F+    +RR   V  Y
Sbjct:  548 RKHIVEKILTLACPR--CKTAFFDFDGCFALSCGRCGCGFCAWCLTDCGADAHGCAARCGQLYGGTDRYFGTREQFDAHHSRRRRDLVEAY 636          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|612399298|ref|XP_007515168.1| (predicted protein [Bathycoccus prasinos] >gi|412993536|emb|CCO14047.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 95.9005 bits (237), Expect = 4.685e-18
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHC----------------------RDVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVKKVL 130
            ++H+ E++LTL CPR  C +AF+DFDGCFAL C RC  GFCA C+ DCG DAH H                       R    G +G+   F++ QR RRL  +T Y +   ++    FV++VL++   + ++L D+ +  ++V+K L
Sbjct:  136 KEHVIEKVLTLSCPR--CEQAFVDFDGCFALRCARCQAGFCAYCLADCGRDAHAHIGGCELGKQVTKWAQKNKSTVNNRGHPPGTYGSPAAFDESQRLRRLRDLTSYFELKEEK----FVTEVLDA---LEKELKDLNLTKKDVQKSL 274          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|514683533|ref|XP_004989348.1| (hypothetical protein PTSG_09987 [Salpingoeca rosetta] >gi|326433693|gb|EGD79263.1| hypothetical protein PTSG_09987 [Salpingoeca rosetta])

HSP 1 Score: 88.9669 bits (219), Expect = 9.182e-16
Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAH---NHCRDVH--YGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVE 124
            R+HI E I TLKCPR  C  AF+DFDGCFALTC  C CGFCA C+ D G+DAH     C + +   G FGTL  F     +RR   +  YL  +    +P    +V+ +     +D  D+GI+++
Sbjct:  370 RKHIVENIFTLKCPR--CSAAFVDFDGCFALTCAHCKCGFCAWCLTDRGNDAHPCAAQCGEKYGRGGYFGTLREFEQHHVRRRQAELDTYLGTL----TPEVRGRVVTA---CRRDAQDLGIKLQ 485          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|923124091|ref|XP_013755514.1| (serine/threonine protein kinase [Thecamonas trahens ATCC 50062] >gi|906558674|gb|KNC51917.1| serine/threonine protein kinase [Thecamonas trahens ATCC 50062])

HSP 1 Score: 87.8113 bits (216), Expect = 4.227e-15
Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 0
Query:    7 HIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHN---HCR-DVHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQV 123
            H+ E ILTL+CPR  C  AF DF GC AL C +C   FCA C+ DCGDDAH    HC  +     + + + + DIQR RR + + +YL  +    + A  ++        +QD AD+GI +
Sbjct: 1300 HVHEAILTLRCPR--CAAAFFDFTGCAALVCTQCNAAFCALCLADCGDDAHTHVLHCSLNPSEDYYVSNDTYQDIQRARRQLALRQYLASLDADLAAAVTAR-------CAQDCADLGIVI 1411          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|303281941|ref|XP_003060262.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226457733|gb|EEH55031.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 85.5001 bits (210), Expect = 7.299e-15
Identity = 54/155 (34.84%), Postives = 74/155 (47.74%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRDVHYG--------------------------------VFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEVK 127
            R+H+ E+ILTL CPR  C +AF+DF+GCFAL C RC   FCA C+ DCG DAH H      G                                 +GT   F++ Q++RR   +  YL    ++      SK+LE    V  +LAD+GI   E++
Sbjct:  184 REHVVEKILTLSCPR--CTQAFVDFEGCFALNCSRCRAAFCAYCLADCGKDAHAHVGSCPEGAASLKAMKSKEKAAGGGGGGGGGARGLAGQGTTYGTRAMFDESQKRRRCKHLVLYL----ERHDGETQSKILEG---VKTELADLGITSRELR 329          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|929749013|ref|XP_014149490.1| (hypothetical protein SARC_11891 [Sphaeroforma arctica JP610] >gi|906940866|gb|KNC75588.1| hypothetical protein SARC_11891 [Sphaeroforma arctica JP610])

HSP 1 Score: 81.6481 bits (200), Expect = 7.480e-15
Identity = 51/138 (36.96%), Postives = 67/138 (48.55%), Query Frame = 0
Query:    6 QHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCRD----------VHYGVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLA---DVGIQVEEVKKVL 130
            +HI EEIL L+CP+  C + F  FDGCFAL C RC  GFCA C+ DC  DAH H  +           ++  F T+E F  +   RR   V +Y+  I   E      +V ES  P  + L    D     E +K V+
Sbjct:   41 RHIQEEILNLRCPK--CMQVFTTFDGCFALHCHRCQTGFCAWCLGDCHHDAHGHVSNCIRNPKHGTKTNHQYFNTIECFEQVHIMRRGKAVVQYVANI---EDKRIAREVAESIKPECKRLGFSLDYAASEEALKSVM 173          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|929755662|ref|XP_014152813.1| (serine/threonine protein kinase [Sphaeroforma arctica JP610] >gi|906947817|gb|KNC78911.1| serine/threonine protein kinase [Sphaeroforma arctica JP610])

HSP 1 Score: 87.0409 bits (214), Expect = 8.022e-15
Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    6 QHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCGCGFCAACIEDCGDDAHNHCR---------DVHYGVFGTLERFNDIQRKRR 82
            ++IA++ILT+KCPR+G   AF+DF GCFAL C  C C FCA C++DCG DAH H R         D +YG   T   FN   R RR
Sbjct: 1784 RYIADDILTIKCPRQG--HAFIDFTGCFALKCHACDCHFCAYCLQDCGRDAHAHVRQCAMKPPGADEYYGQLST---FNKQMRDRR 1864          
BLAST of EWM26830.1 vs. NCBI_GenBank
Match: gi|922860143|gb|KOO28070.1| (kinase family protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 85.8853 bits (211), Expect = 1.363e-14
Identity = 53/133 (39.85%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    5 RQHIAEEILTLKCPRKGCRRAFLDFDGCFALTCPRCG-----CGFCAACIEDCGDDAHNHCRDVHY------GVFGTLERFNDIQRKRRLVGVTEYLKWISQQESPAFVSKVLESRGPVSQDLADVGIQVEEV 126
            R HI E IL   CPR  C +AF+DFDGCFAL+C R G     CGFCA C+ D   DAH H  +  +      GV+ +LE F + QR+R    + EYL  +      A  ++ L      +QDL  +GI   E+
Sbjct:  752 RHHIVERILNPACPR--CGQAFVDFDGCFALSCSRVGCSLPACGFCAYCLHDANGDAHAHVAECRHNIAPGRGVWASLEIFKEAQRRRCTRMIREYLATLDA----ASRARALRD---CAQDLRGLGIAPNEI 875          
The following BLAST results are available for this feature:
BLAST of EWM26830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108921|gb|EWM26830.1|0.000e+0100.00hypothetical protein Naga_100018g4 [Nannochloropsi... [more]
gi|514692573|ref|XP_004993859.1|2.209e-1953.19hypothetical protein PTSG_05285 [Salpingoeca roset... [more]
gi|167535916|ref|XP_001749631.1|3.688e-1852.04hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|612399298|ref|XP_007515168.1|4.685e-1836.49predicted protein [Bathycoccus prasinos] >gi|41299... [more]
gi|514683533|ref|XP_004989348.1|9.182e-1642.40hypothetical protein PTSG_09987 [Salpingoeca roset... [more]
gi|923124091|ref|XP_013755514.1|4.227e-1539.67serine/threonine protein kinase [Thecamonas trahen... [more]
gi|303281941|ref|XP_003060262.1|7.299e-1534.84predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|929749013|ref|XP_014149490.1|7.480e-1536.96hypothetical protein SARC_11891 [Sphaeroforma arct... [more]
gi|929755662|ref|XP_014152813.1|8.022e-1550.00serine/threonine protein kinase [Sphaeroforma arct... [more]
gi|922860143|gb|KOO28070.1|1.363e-1439.85kinase family protein [Chrysochromulina sp. CCMP29... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3898rna3898Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications