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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-conjugating enzyme |
| Orig transcript id | gnl|cribi|Naga_100018g37.2764.mrna |
| Orig protein id | gnl|cribi|Naga_100018g37.2764 |
| Gene | UBC |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:280841..282582 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3869 ID=rna3869|Name=rna3869|organism=Nannochloropsis gaditana|type=mRNA|length=3771bp
AACAGCACTTTTTAAATGGATTATATACACATGGTCTGCGGACACTGAGC
TTTTGGCCCGTCTGCGCCCCTCCTTGGCCCTTATGAATCCACTTCCTCCC
GTTCAGCTCGAAGTTACTCAAAAAATTCTCCTTGTGGGCGGAGCCGCGGT
TGGCAAAACAAGCTTCATTCGTCGCTTTTTCAATGAACCCTTGCACGGCT
TACAATATGTTCCAACGGTCGGCGTGGACGTGATCGTCTACCCCCTCCCC
CCGCAACCAATGACCGTGCGAAATAAACCTCTCCCCGGCTCCTTGGACAA
CAAAGCGGGCGCATCCGAAAATTTCCTCCCTACGAACACCACCACGGCCC
ATAAGGGCAGCATAATCCGTGTCCGAGACGACACGCGTCCTGTGCACCTG
CACTTTTGGGACGTGAGTCACAAGGAGCTCACCGCCTCCCCCAGTCACCA
CGCCTTGATCTGCACCCACGTGGCCGGTGTCTTCCTTGTCTTTGACGTGG
GAAACCGGGCTTCGCTGGCGGCCGTCGATGCCTGGCAGCACCTCCTCGCT
CACTACGTCCCTGCGCACATCCCTCGGGTCTTATTGGCCCACAAGGCGGA
CCTGATGAACGACAGCCGGTGCTGCGTCACGGACCGGATCTTGGAGGCCT
ACCGACGGGCGGCCGGTCTCACGGACTGGTGTTGGACGGTGGGCCACGAA
TGTTTCGGAGATTACGTGGCAAGTCGCTCGAGCAAGTCGAGGCCCGTGGC
GGATGCGGTCCAGCTCTTAGTGGATCACATGCAGTGGGGCCGGGAAGGCC
GCGACCGAGGGGAGGGAGGGGGAGGAAGCGGGGGGAGGACGGGGGGGAGG
AGGGGCGGGGGGACCAGAAGCTTTCGTGGGGAGGGGAGAACGATGGGGGA
ACGGAGAGAGGGCGTTTGAGGGCCATGTCTCGGTCCAAGAAGGGGATGAA
AAGGGAGAGGGGGAGGCGAAGGCAAGGAGGGAGCCACAGCGCGGGGAGGG
AGGGAGGGAGGACGGGCGGGAGGGAGGGGCGGAGGAAGGATGCTCGGCCA
TGCGCAGCCTCCGGTACGGGTACGTGGACACAGAGAAGGCGCGCGCTCAA
CGACGACAGGGGCGATCCCCAGCTCCCTGCTTGTCCCCCGCTTTCTCCTG
GCCCCGTGCAGGCTTCCCCCGGGTGGCGCTGGCCTCCTACCAACCGCCGC
GGGGATGGCTGCCCTCGGAGGACCTGGCGGTGCTCTTTGGCCGCAGTCCC
GCTGCGTCTGTCACCCTTGGAGTTTTCCAACGGCAGCAGCTAGACCGACG
TCGGGAGAGGCGGACATTAATGCCCTCAAGCGTCCCCCTCCCCCTCCCTT
CCACCCCTCCTTCCCCACCCCCCGATCCTGGATGGAGGCACTTGGCCGGA
AGCATGGGCCGGGAGGCAGCAGAGCGCCTTCTCCGTGCCAAGCCCCCCGG
CACCTTTCTCCTGCGACGCTACGACGAACGCTCCCTCCGCCTCTCCTACC
GGACCCGCACCGGCGTCGAGCATGCCCCTTTGGTGTTCACGCGGGAGGGG
CGCTGGGCCCATGTCCGGAGGGTCTCCACGGCAGGAGTGGCCTCCCCTGG
TGCCGGGGGAGGGGCTGGGAGAGGCGGGGGGTACTTCTCTCCCCCAAGCA
CGGCGCCCAGCACCCCCCTGCGAGGGGACCGCCGAGACCGTTCTGCCTCC
ACCTCCTCCACCTCCTCTCCTTCCACCTCCTCGCCCTCCTCCCCTTCTTC
CCTGCCCGGGTCCACCCTGCCCGTGTCCACCCACGCGCTCTTCCAGGCGC
AGGCCTTCGGGCACCAGCTCCACGCCCCCTTCCCTTCGGTGCCGCTTTCC
ATTCGCCCGGCCCGGCGGATGGGCCGAGGTTCGATTGGCAGGTCGGAGGG
GCCCTTGACCAGTCCTTTCCAGCCACCTCCACAATCAGAGGCACTCCAAC
CACCTCCATCCGCCCCTCCGCAGTCGTTTGCAAGCTTGGAGGAGCTCCTG
TCCTTTTTTAGGAGGAAAGCGGCCCACGGCCTCTGCTTTCGGCGCGTCCC
TGGGACCTGCGACTACGAGGAGTTGAGCGAGGGTGGGGACGGCCGGAGAA
AGACAGGGCCCTGGCTGGGAGAACAGGAAGGAGGGGAAGGGGGAGGGGGA
GGGATGGGGGGAGGACGGGTGCTGCTTGGCTGGTTCCAGCGGCGGATCTC
TCAACCCGGAACGGCGAGTGCGGAGGGCCGGGGGGGCCCTTCGAAGCAGG
AGGGCGGGCGAAAGGGCAAGGCCCAGGCACAGGGAGGCACATGCACTGAG
GATACCTTTCCGTCGTCCGTGGAGGTGGTGGAGGTGTTTAAGTCCCTCCA
TGAGGTGCTGGCGGCCGTGGGGAGGCGGGACGGGGCCGAGCGCCAGGGCA
GGGGGGGGGTGGAAGCACGGGAAAGAGAGGCTGGGCTGGGCACGGAGGAG
GAAGAGGATCAGATGAGCTTGCTTCGGCTGTGCGACCAGAGCGCCGAGCC
AGTCCTTGCGGCGTTGGGGCTGAAGACCGTCTCCCCGGCACCCGAGGAGG
GGCCCTGGAGGCAGGAGCACGGGCGGGAGGGGGAGGCGATGGACCTGGCC
GCGCTGGTAGAGAAGATTGTGCTGCTAGACATGAAAATTTTTCAGCTCCT
TTCGACCATCAACAGACTTTTGCTGGTTGCCACCTCCGTCCCCTCTTCGT
CCTCCCCTTCCCCTCCTCCCTCTATGCCCCCTTCCCCCTCCGCGTCCTCT
TCCCGCACCAAGACGCGCGGTCAGAAGACGGCCTGTCTGGAAGCCTTAAG
GGTCCTGGGTCGATGGAGACCCCTACTCAAGACGCTTCGCCTCCGCTTTC
AGACAGAATGGCAGTATACACACGAGTAGGGGCATCGTCCTGGGCTAGCA
ACCTCCTCTTCGGCGGTGGGAAGCCCGGAGTAAGGGCCGTGTGGGCGGGC
GTAAGAATGGCAAAAGCTGGACAGTCGGCTCCAAAACAAATGACACAAGG
AGTTCCTGACCGCACAAGGGCTGGAGTGAGGGCGACTTGAGTCTCCGCAT
TCTTGTTTCTTTGATTTTTACACGGTGGGCCGGCGTGGCTTGCCTTGTTC
CTCCCTGCCTTTCCACCGCCACCATTTGTTTGGTTTTCGGCCCAAACGAA
AGCACCCAAAGACTCCTCAACACCTGTCGTCGTGGTATAACCAGTTGGCC
TGCTCCTTCCCCGGAGGGTTGTCGGCGTGCACGTGGTTGTCCTGCGGGAT
CTTCTTCTCCCTCGCCGAAGAGAGCATGGACAGGATGGACAGAGCCAGCA
TGGAGGCTGTCATGTTCGGCCGCCAGTCCCTCCCCAGCAAATTCAAGCAG
ATGTCCCCGTTTGTGTAGACATGTTCATGCCGTGGCGGGGGTTGCAAGAA
GTATACCGAGGGGGGCTTGCTAGGGTAGTCCATGGGGAAAGTGAACTGTC
GTGGGAGAGACGTAGGGAGGGGACGCTGGGTAACGAACGAGCCATAATAC
TGAAGATACTGAGTGAAAAGGCACAAGTTCAGGCATACGGCTGAGTTTCC
TGTGAAAAAATCTGTCTCGGACCCCTCACAGCCGCCGATTGCCGGCTTAC
TCGGACTAATATGTGCCAAGACATCCTAGAGGGGAAGATCATGCGACATA
ATACAGAACCGTCGCCCTCGCACTAGATCGTGCCCGCACAAATTCTCTTC
CATCATCGCCTTCAACTAATCTTTACCTTAAGTTTGTACTTCTCCCCCGC
AAAGATGGTCCCTTTCGCACC back to topprotein sequence of rna3869 >rna3869-protein ID=rna3869-protein|Name=rna3869|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MSRRASRVKRAGMRDGIPSLSNLVLLWLFLFTAFTRSESHSISSNRCILK
SNKAIRARSVLLRRKEETFRVLHPQLPLITLLAQKRGGALQSSSLLGRIM
RAWRGSAKRGGSIHGRIKRFLGLLWNAAGSSAGHDVKRSTIRSGSLGGVG
GGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIR
VWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYT
NGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPP
GKEQANWLYHDDRC back to topmRNA from alignment at CM002462.1:280841..282582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3869 ID=rna3869|Name=rna3869|organism=Nannochloropsis gaditana|type=mRNA|length=1742bp|location=Sequence derived from alignment at CM002462.1:280841..282582- (Nannochloropsis gaditana)
ACCGTGATGGATGGCAACGCAAGTACCCGGCATCCCCCTCAGATAAATGT
CTTGGAACTAATTTCCCCAACGCATTGAAACATCCTCGTACCCATCGCGT
CGGGTCCATGCATATTTATAACAGGAGGAGGGAAGATGAGCAGGAGAGCG
TCGCGGGTAAAACGCGCAGGGATGCGGGATGGCATCCCCTCTCTCTCAAA
CCTGGTACTGCTCTGGCTCTTCCTCTTCACTGCCTTTACCAGAAGCGAAT
CCCACAGCATCAGCAGCAATAGATGTATTCTTAAATCGAATAAAGCTATT
AGAGCAAGATCAGTACTGCTGAGAAGAAAAGAGGAGACCTTCCGAGTCCT
GCATCCACAATTACCTTTGATCACCCTTTTGGCTCAGAAGCGAGGAGGGG
CTTTGCAGTCATCCAGCCTGCTTGGACGCATCATGCGCGCATGGCGGGGC
AGTGCCAAGCGTGGTGGTAGTATACATGGTCGAATTAAGCGTTTTCTTGG
GCTTTTATGGAATGCAGCAGGTTCCAGCGCGGGCCACGACGTAAAGAGGA
GTACAATTCGCAGTGGGAGTCTTGGAGGGGTCGGTGGCGGAAGATTGGGT
GGGAATCGGATGCAAAAGCATTTGGGGAAAGAATTCCGGCGAGGAAACGC
CAATTTTCGTGTCCAAAAGGTGGGTAAACCGGAATGGGGTGTCTTTTGCC
GCTGTTGAGCAAGGCTTTCGGTCTTGTTTCTTACCTCGTCCTCGTAATTT
GGAAAATTCTCGTGACTTAAATCCTTTGCTTTTCATCCTTACCCGGACAG
GAGCTGCGCGAATGGCTGGCGAATCCCACGGAAAATCTGCAGGTGGCCGT
GGGGGACAACATTCGGGTATGGGTGGTGACGTTGACGGGTGCGAAAGGGA
CCATCTTTGCGGGGGAGAAGTACAAACTTAAGGTAAAGATTAGTTGAAGG
CGATGATGGAAGAGAATTTGTGCGGGCACGATCTAGTGCGAGGGCGACGG
TTCTGTATTATGTCGCATGATCTTCCCCTCTAGGATGTCTTGGCACATAT
TAGTCCGAGTAAGCCGGCAATCGGCGGCTGTGAGGGGTCCGAGACAGATT
TTTTCACAGGAAACTCAGCCGTATGCCTGAACTTGTGCCTTTTCACTCAG
TATCTTCAGTATTATGGCTCGTTCGTTACCCAGCGTCCCCTCCCTACGTC
TCTCCCACGACAGTTCACTTTCCCCATGGACTACCCTAGCAAGCCCCCCT
CGGTATACTTCTTGCAACCCCCGCCACGGCATGAACATGTCTACACAAAC
GGGGACATCTGCTTGAATTTGCTGGGGAGGGACTGGCGGCCGAACATGAC
AGCCTCCATGCTGGCTCTGTCCATCCTGTCCATGCTCTCTTCGGCGAGGG
AGAAGAAGATCCCGCAGGACAACCACGTGCACGCCGACAACCCTCCGGGG
AAGGAGCAGGCCAACTGGTTATACCACGACGACAGGTGTTGAGGAGTCTT
TGGGTGCTTTCGTTTGGGCCGAAAACCAAACAAATGGTGGCGGTGGAAAG
GCAGGGAGGAACAAGGCAAGCCACGCCGGCCCACCGTGTAAAAATCAAAG
AAACAAGAATGCGGAGACTCAAGTCGCCCTCACTCCAGCCCTTGTGCGGT
CAGGAACTCCTTGTGTCATTTGTTTTGGAGCCGACTGTCCAGCTTTTGCC
ATTCTTACGCCCGCCCACACGGCCCTTACTCCGGGCTTCCCA back to topCoding sequence (CDS) from alignment at CM002462.1:280841..282582- >rna3869 ID=rna3869|Name=rna3869|organism=Nannochloropsis gaditana|type=CDS|length=2835bp|location=Sequence derived from alignment at CM002462.1:280841..282582- (Nannochloropsis gaditana)
TTCACTTTCCCCATGGACTACCCTAGCAAGCCCCCCTCGGTATACTTCTT
GCAACCCCCGCCACGGCATGAACATGTCTACACAAACGGGGACATCTGCT
TGAATTTGCTGGGGAGGGACTGGCGGCCGAACATGACAGCCTCCATGCTG
GCTCTGTCCATCCTGTCCATGCTCTCTTCGGCGAGGGAGAAGAAGATCCC
GCAGGACAACCACGTGCACGCCGACAACCCTCCGGGGAAGGAGCAGGCCA
ACTGGTTATACCACGACGACAGGTGTTGAGAGCTGCGCGAATGGCTGGCG
AATCCCACGGAAAATCTGCAGGTGGCCGTGGGGGACAACATTCGGGTATG
GGTGGTGACGTTGACGGGTGCGAAAGGGACCATCTTTGCGGGGGAGAAGT
ACAAACTTAAGATGAGCAGGAGAGCGTCGCGGGTAAAACGCGCAGGGATG
CGGGATGGCATCCCCTCTCTCTCAAACCTGGTACTGCTCTGGCTCTTCCT
CTTCACTGCCTTTACCAGAAGCGAATCCCACAGCATCAGCAGCAATAGAT
GTATTCTTAAATCGAATAAAGCTATTAGAGCAAGATCAGTACTGCTGAGA
AGAAAAGAGGAGACCTTCCGAGTCCTGCATCCACAATTACCTTTGATCAC
CCTTTTGGCTCAGAAGCGAGGAGGGGCTTTGCAGTCATCCAGCCTGCTTG
GACGCATCATGCGCGCATGGCGGGGCAGTGCCAAGCGTGGTGGTAGTATA
CATGGTCGAATTAAGCGTTTTCTTGGGCTTTTATGGAATGCAGCAGGTTC
CAGCGCGGGCCACGACGTAAAGAGGAGTACAATTCGCAGTGGGAGTCTTG
GAGGGGTCGGTGGCGGAAGATTGGGTGGGAATCGGATGCAAAAGCATTTG
GGGAAAGAATTCCGGCGAGGAAACGCCAATTTTCGTGTCCAAAAGTTCAC
TTTCCCCATGGACTACCCTAGCAAGCCCCCCTCGGTATACTTCTTGCAAC
CCCCGCCACGGCATGAACATGTCTACACAAACGGGGACATCTGCTTGAAT
TTGCTGGGGAGGGACTGGCGGCCGAACATGACAGCCTCCATGCTGGCTCT
GTCCATCCTGTCCATGCTCTCTTCGGCGAGGGAGAAGAAGATCCCGCAGG
ACAACCACGTGCACGCCGACAACCCTCCGGGGAAGGAGCAGGCCAACTGG
TTATACCACGACGACAGGTGTTGAGAGCTGCGCGAATGGCTGGCGAATCC
CACGGAAAATCTGCAGGTGGCCGTGGGGGACAACATTCGGGTATGGGTGG
TGACGTTGACGGGTGCGAAAGGGACCATCTTTGCGGGGGAGAAGTACAAA
CTTAAGATGAGCAGGAGAGCGTCGCGGGTAAAACGCGCAGGGATGCGGGA
TGGCATCCCCTCTCTCTCAAACCTGGTACTGCTCTGGCTCTTCCTCTTCA
CTGCCTTTACCAGAAGCGAATCCCACAGCATCAGCAGCAATAGATGTATT
CTTAAATCGAATAAAGCTATTAGAGCAAGATCAGTACTGCTGAGAAGAAA
AGAGGAGACCTTCCGAGTCCTGCATCCACAATTACCTTTGATCACCCTTT
TGGCTCAGAAGCGAGGAGGGGCTTTGCAGTCATCCAGCCTGCTTGGACGC
ATCATGCGCGCATGGCGGGGCAGTGCCAAGCGTGGTGGTAGTATACATGG
TCGAATTAAGCGTTTTCTTGGGCTTTTATGGAATGCAGCAGGTTCCAGCG
CGGGCCACGACGTAAAGAGGAGTACAATTCGCAGTGGGAGTCTTGGAGGG
GTCGGTGGCGGAAGATTGGGTGGGAATCGGATGCAAAAGCATTTGGGGAA
AGAATTCCGGCGAGGAAACGCCAATTTTCGTGTCCAAAAGTTCACTTTCC
CCATGGACTACCCTAGCAAGCCCCCCTCGGTATACTTCTTGCAACCCCCG
CCACGGCATGAACATGTCTACACAAACGGGGACATCTGCTTGAATTTGCT
GGGGAGGGACTGGCGGCCGAACATGACAGCCTCCATGCTGGCTCTGTCCA
TCCTGTCCATGCTCTCTTCGGCGAGGGAGAAGAAGATCCCGCAGGACAAC
CACGTGCACGCCGACAACCCTCCGGGGAAGGAGCAGGCCAACTGGTTATA
CCACGACGACAGGTGTTGAGAGCTGCGCGAATGGCTGGCGAATCCCACGG
AAAATCTGCAGGTGGCCGTGGGGGACAACATTCGGGTATGGGTGGTGACG
TTGACGGGTGCGAAAGGGACCATCTTTGCGGGGGAGAAGTACAAACTTAA
GATGAGCAGGAGAGCGTCGCGGGTAAAACGCGCAGGGATGCGGGATGGCA
TCCCCTCTCTCTCAAACCTGGTACTGCTCTGGCTCTTCCTCTTCACTGCC
TTTACCAGAAGCGAATCCCACAGCATCAGCAGCAATAGATGTATTCTTAA
ATCGAATAAAGCTATTAGAGCAAGATCAGTACTGCTGAGAAGAAAAGAGG
AGACCTTCCGAGTCCTGCATCCACAATTACCTTTGATCACCCTTTTGGCT
CAGAAGCGAGGAGGGGCTTTGCAGTCATCCAGCCTGCTTGGACGCATCAT
GCGCGCATGGCGGGGCAGTGCCAAGCGTGGTGGTAGTATACATGGTCGAA
TTAAGCGTTTTCTTGGGCTTTTATGGAATGCAGCAGGTTCCAGCGCGGGC
CACGACGTAAAGAGGAGTACAATTCGCAGTGGGAGTCTTGGAGGGGTCGG
TGGCGGAAGATTGGGTGGGAATCGGATGCAAAAGCATTTGGGGAAAGAAT
TCCGGCGAGGAAACGCCAATTTTCGTGTCCAAAAG back to top
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