EWM26784.1, cds3860 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|585108875|gb|EWM26784.1| (ubiquitin-conjugating enzyme [Nannochloropsis gaditana]) HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0 Query: 1 MSRRASRVKRAGMRDGIPSLSNLVLLWLFLFTAFTRSESHSISSNRCILKSNKAIRARSVLLRRKEETFRVLHPQLPLITLLAQKRGGALQSSSLLGRIMRAWRGSAKRGGSIHGRIKRFLGLLWNAAGSSAGHDVKRSTIRSGSLGGVGGGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 MSRRASRVKRAGMRDGIPSLSNLVLLWLFLFTAFTRSESHSISSNRCILKSNKAIRARSVLLRRKEETFRVLHPQLPLITLLAQKRGGALQSSSLLGRIMRAWRGSAKRGGSIHGRIKRFLGLLWNAAGSSAGHDVKRSTIRSGSLGGVGGGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC Sbjct: 1 MSRRASRVKRAGMRDGIPSLSNLVLLWLFLFTAFTRSESHSISSNRCILKSNKAIRARSVLLRRKEETFRVLHPQLPLITLLAQKRGGALQSSSLLGRIMRAWRGSAKRGGSIHGRIKRFLGLLWNAAGSSAGHDVKRSTIRSGSLGGVGGGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|873221734|emb|CEM32784.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 225.713 bits (574), Expect = 4.257e-70 Identity = 94/155 (60.65%), Postives = 124/155 (80.00%), Query Frame = 0 Query: 160 QKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 + HL + FR G+ N+R+QKEL+++L P ++ ++AVG NIRVW++TLTG +GT++ GEKY+LK FP +YP KPP +YFLQP PRH HVY+NGDICLNLLG DW+P +T + +ALSILSMLSSA+EKK+P DN HAD G +Q NW+YHDD+C Sbjct: 52 KDHLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQPTPRHPHVYSNGDICLNLLGTDWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|298708654|emb|CBJ26141.1| (Ubiquitin-conjugating enzyme [Ectocarpus siliculosus]) HSP 1 Score: 227.639 bits (579), Expect = 2.486e-69 Identity = 118/257 (45.91%), Postives = 166/257 (64.59%), Query Frame = 0 Query: 73 HPQLPLITLLAQKRGGALQSSSLLGRIMRAWRGSAKR-----------GGSIHGRIKRFL-GLLWNAAGSSAGHDVKRSTIRSGSLGGVGGGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQ--PPPRHEHVYTNGDICLNLL-GRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 H + L T RGG+ + SL MR +R GG + R+KR + G+ GS + ++ + G+ G HL K +R GNAN+R+QKEL+E++ANP + +V+VG NIRVW++T++GA+GTI+AGEK++L+ +FP +YP+KPP+VYFLQ PPP+H+H+YTNGDICL+LL RDW+PN+T LALSILSMLSSA+EK++P+DN HA+ PG+ Q W+YHDD C Sbjct: 62 HGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLEGGGLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQ-QWIYHDDLC 317
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|56526819|emb|CAH77473.1| (ubiquitin-conjugating enzyme, putative, partial [Plasmodium chabaudi chabaudi]) HSP 1 Score: 208.379 bits (529), Expect = 5.544e-63 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YKLK FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 69 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPNDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 229
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|68076965|ref|XP_680402.1| (ubiquitin-conjugating enzyme [Plasmodium berghei strain ANKA], partial [Plasmodium berghei ANKA] >gi|56501333|emb|CAH98057.1| ubiquitin-conjugating enzyme, putative, partial [Plasmodium berghei]) HSP 1 Score: 207.608 bits (527), Expect = 8.461e-63 Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YK+K FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 69 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEAYKIKIIFPNDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 229
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|1037138938|emb|SBS87761.1| (ubiquitin-conjugating enzyme E2, putative [Plasmodium malariae]) HSP 1 Score: 206.453 bits (524), Expect = 1.004e-62 Identity = 91/157 (57.96%), Postives = 119/157 (75.80%), Query Frame = 0 Query: 159 MQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAV-GDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+VT TG + TI+A E YK+K F DYP KPP+VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 45 VQKHIRTKYNLGNANYRIQKELHNFLKNPPINCTIDVHPNNIRIWIVTYTGLENTIYANEIYKIKIIFSDDYPLKPPTVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLILSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 201
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|1068927187|emb|SCM13190.1| (ubiquitin-conjugating enzyme E2, putative [Plasmodium chabaudi adami]) HSP 1 Score: 208.764 bits (530), Expect = 1.350e-62 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YKLK FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 116 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPSDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 276
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|669194992|ref|XP_008622507.1| (ubiquitin-conjugating enzyme E2 W [Plasmodium vinckei vinckei] >gi|657011987|gb|KEG05022.1| ubiquitin-conjugating enzyme E2 W [Plasmodium vinckei vinckei]) HSP 1 Score: 208.764 bits (530), Expect = 1.473e-62 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YKLK FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 116 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYIGLENTIYANEVYKLKIIFPNDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 276
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|1061789462|emb|SCM06193.1| (ubiquitin-conjugating enzyme E2, putative [Plasmodium chabaudi chabaudi]) HSP 1 Score: 208.764 bits (530), Expect = 1.641e-62 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YKLK FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 116 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPNDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 276
BLAST of EWM26784.1 vs. NCBI_GenBank
Match: gi|1061794398|emb|SCM11280.1| (ubiquitin-conjugating enzyme E2, putative [Plasmodium chabaudi adami]) HSP 1 Score: 208.764 bits (530), Expect = 1.658e-62 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 155 GGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVG-DNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314 N +QKH+ ++ GNAN+R+QKEL +L NP N + V +NIR+W+V G + TI+A E YKLK FP DYP KPP VYFLQ PP+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSA+EKK+P DN+ HAD PG Q N+LYHDD+C Sbjct: 116 SNNNIQKHMRAKYNLGNANYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPNDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGNDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 276 The following BLAST results are available for this feature:
BLAST of EWM26784.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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