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Properties
| Property Name | Value |
|---|
| Product | Prohibitin |
| Orig transcript id | gnl|cribi|Naga_100018g43.2787.mrna |
| Orig protein id | gnl|cribi|Naga_100018g43.2787 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:270787..272655 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3863 ID=rna3863|Name=rna3863|organism=Nannochloropsis gaditana|type=mRNA|length=228bp
ATGGTCACACAAGGCAGAGACTTGAACTGGAAATACCCGCTCACAGACCT
GCACATTTTCAGATGCTGCATGAGCGTGTTTCAAAGTGCCATATCATGCC
ACAGCTCGTCTCCACTCTTTGTGGCCTACATATCGGATTCCCAGGGCATC
TCCCGTCTTGCAGTTGTCCTCCTGTACAAAAAAGCTGGGCAACACACATT
TCGAAACGAAGAGCGATACGGCAATTAA back to topprotein sequence of rna3863 >rna3863-protein ID=rna3863-protein|Name=rna3863|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MNAAKKFAENLGSKIPKGAGMGGGAGGGGGGGGPGGMSPAGPLGALLGVT
GILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIY
DIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDER
VLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDD
VSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGE
AQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLN
MYSGDEEKSGKKR back to topmRNA from alignment at CM002462.1:270787..272655+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3863 ID=rna3863|Name=rna3863|organism=Nannochloropsis gaditana|type=mRNA|length=1869bp|location=Sequence derived from alignment at CM002462.1:270787..272655+ (Nannochloropsis gaditana)
AATGACTTGGCGTGAGTTTTTGGACAATATCGTGGCGTATGAATGAAGTG
GGGCGTTCCCACGTGGGTCAGTGTTTTTTGGCAAAGTAATTAATTATTGG
TTGGGAGGGCAGTGACTATGCTCGGGCACTCAGCACACCAGATATCTTGG
TATCCCGTGACGACTCTTGAGTTTCATGATCCTTTTACTACTTTTGCAAA
AAACACAGAGGCAGCATGAATGCAGCCAAGAAGTTTGCCGAGAACCTGGG
TAGCAAAATTCCCAAGGGTACGTTTGTCAACATAATATCAGGGATACGAG
GATGGGGGAATGAAGCAGCAGGAGGTCTACCATGCATCACAGTCTTCTGC
CTGCTTTTCACAACGCGCGTACCATGTCGCACGGAGTTAAGACTTTTtcg
ttccctctcttctctaTGTCAGGTGCTGGCATGGGGGGTggcgcgggtgg
cgggggtggagggggtggcccCGGGGGCATGTCTCCAGCAGGACCGCTGG
GAGCCTTGCTAGGTGTGACGGGCATCCTTTACGCCGGGTACAATAGTTTT
TACACGGTGGAGGGTGGGCACCGAGCTCTGTTGTTCAACAGATTAATCGG
TGTGAAAGAAGAAGTGTACATGGAGGGAATGCATTTTATGATTCCCTGGT
TCGACATGCCCATCATTTACGACATCCGCCCCAAGCCCCGGATGATCCAG
TCCTTGACAGGAAGCAAAGGTACGTATCGGCTGCTTCTACATGGAATTCC
CTGCGCGTGCATGCATCCATCCATCCTAGAGGGACCGCGTTCTCCCATCC
TGCTCGGGTGGCGAagaccctcccaccccgctcacttcttcccctccctc
cccagacaTGCAAATGGTCAACATCACCATCCGCGTTTTGTCTAAGCCCG
ACTCGGCTCAACTCCGCTGGATCTTCCGCACCTTGGGTCGCGACTACGAC
GAGcgtgtcctcccttccatcgtcAACGAGGTCTccaaggccgtggtggc
caAGTACAACGCCGCGGAGCTCTTGACGAAGCGTGAGATGGTCTCCACCC
AAATCCGGTTGCAGTTGGAGAAGCGTGCGAAGGAGTTTCGGATCGTCCTG
GACGACGTGTCGATCACCCACTTGACCTTCTCCCGGGAGTACACGAACGC
GGTCGAGGCCAAGCAAGTTGGTGAGTGGGGcaatgggggaaggggagagg
gagggaccgaagGGAGCAAGTCGGAGGTGggctgagggagagagggaagg
cgtaGGGGAGACTTTACATGGAGAATGGGGAAGCAgtggtgatggagggg
aaggtgaaagCTTTGAGCTTGTTTTTACATAGCTACTTGGGGTTTATGTT
GGCGTTTCCGTGACCTCCGAAACCACATGCTAACCGCTCTCTACGGTCTA
TCACAGCTCAACAGGAAGCCGAGCGCGCGAAATATGTGGTAATGAAAGCG
AAccaagaaaaggaagccaTCATTATcaaagcggagggagaggcccaATC
CGCTGCTCTGGTGGGTAAGGCCATTCGAGAGAATCCTGCTTTTATCAAGC
TGCGCAAAATCGACGCAGCCAGGGACATTGCGAATGTCGTGTCCTCTTCG
GGTCAGAAGGTCTATCTGTCTGCGGACTCCCTCTTGTTGAATATGTACTC
GGGCGACGAAGAGAAGTCTGGAAAGAAGCGGTAGGCATGCCACACGGGTA
GAGAGGAGTGCGACGCGGGAAACTAAACAGGAAGAGgcgcaaggagaaaa
agacttGGTGGGAAAGTGTACTCGTTGCTCTTTCAGGAAGGCAGGATGCA
TCGACAAAAGTTAAAGAAATCCAAACCCTCGACCAAAATTGACTGCAATT
GAAGCAAGTGCCTTGTGAG back to topCoding sequence (CDS) from alignment at CM002462.1:270787..272655+ >rna3863 ID=rna3863|Name=rna3863|organism=Nannochloropsis gaditana|type=CDS|length=3768bp|location=Sequence derived from alignment at CM002462.1:270787..272655+ (Nannochloropsis gaditana)
ATGAATGCAGCCAAGAAGTTTGCCGAGAACCTGGGTAGCAAAATTCCCAA
GGGTGCTGGCATGGGGGGTggcgcgggtggcgggggtggagggggtggcc
cCGGGGGCATGTCTCCAGCAGGACCGCTGGGAGCCTTGCTAGGTGTGACG
GGCATCCTTTACGCCGGGTACAATAGTTTTTACACGGTGGAGGGTGGGCA
CCGAGCTCTGTTGTTCAACAGATTAATCGGTGTGAAAGAAGAAGTGTACA
TGGAGGGAATGCATTTTATGATTCCCTGGTTCGACATGCCCATCATTTAC
GACATCCGCCCCAAGCCCCGGATGATCCAGTCCTTGACAGGAAGCAAAGa
caTGCAAATGGTCAACATCACCATCCGCGTTTTGTCTAAGCCCGACTCGG
CTCAACTCCGCTGGATCTTCCGCACCTTGGGTCGCGACTACGACGAGcgt
gtcctcccttccatcgtcAACGAGGTCTccaaggccgtggtggccaAGTA
CAACGCCGCGGAGCTCTTGACGAAGCGTGAGATGGTCTCCACCCAAATCC
GGTTGCAGTTGGAGAAGCGTGCGAAGGAGTTTCGGATCGTCCTGGACGAC
GTGTCGATCACCCACTTGACCTTCTCCCGGGAGTACACGAACGCGGTCGA
GGCCAAGCAAGTTGCTCAACAGGAAGCCGAGCGCGCGAAATATGTGGTAA
TGAAAGCGAAccaagaaaaggaagccaTCATTATcaaagcggagggagag
gcccaATCCGCTGCTCTGGTGGGTAAGGCCATTCGAGAGAATCCTGCTTT
TATCAAGCTGCGCAAAATCGACGCAGCCAGGGACATTGCGAATGTCGTGT
CCTCTTCGGGTCAGAAGGTCTATCTGTCTGCGGACTCCCTCTTGTTGAAT
ATGTACTCGGGCGACGAAGAGAAGTCTGGAAAGAAGCGGTAGATGAATGC
AGCCAAGAAGTTTGCCGAGAACCTGGGTAGCAAAATTCCCAAGGGTGCTG
GCATGGGGGGTggcgcgggtggcgggggtggagggggtggcccCGGGGGC
ATGTCTCCAGCAGGACCGCTGGGAGCCTTGCTAGGTGTGACGGGCATCCT
TTACGCCGGGTACAATAGTTTTTACACGGTGGAGGGTGGGCACCGAGCTC
TGTTGTTCAACAGATTAATCGGTGTGAAAGAAGAAGTGTACATGGAGGGA
ATGCATTTTATGATTCCCTGGTTCGACATGCCCATCATTTACGACATCCG
CCCCAAGCCCCGGATGATCCAGTCCTTGACAGGAAGCAAAGacaTGCAAA
TGGTCAACATCACCATCCGCGTTTTGTCTAAGCCCGACTCGGCTCAACTC
CGCTGGATCTTCCGCACCTTGGGTCGCGACTACGACGAGcgtgtcctccc
ttccatcgtcAACGAGGTCTccaaggccgtggtggccaAGTACAACGCCG
CGGAGCTCTTGACGAAGCGTGAGATGGTCTCCACCCAAATCCGGTTGCAG
TTGGAGAAGCGTGCGAAGGAGTTTCGGATCGTCCTGGACGACGTGTCGAT
CACCCACTTGACCTTCTCCCGGGAGTACACGAACGCGGTCGAGGCCAAGC
AAGTTGCTCAACAGGAAGCCGAGCGCGCGAAATATGTGGTAATGAAAGCG
AAccaagaaaaggaagccaTCATTATcaaagcggagggagaggcccaATC
CGCTGCTCTGGTGGGTAAGGCCATTCGAGAGAATCCTGCTTTTATCAAGC
TGCGCAAAATCGACGCAGCCAGGGACATTGCGAATGTCGTGTCCTCTTCG
GGTCAGAAGGTCTATCTGTCTGCGGACTCCCTCTTGTTGAATATGTACTC
GGGCGACGAAGAGAAGTCTGGAAAGAAGCGGTAGATGAATGCAGCCAAGA
AGTTTGCCGAGAACCTGGGTAGCAAAATTCCCAAGGGTGCTGGCATGGGG
GGTggcgcgggtggcgggggtggagggggtggcccCGGGGGCATGTCTCC
AGCAGGACCGCTGGGAGCCTTGCTAGGTGTGACGGGCATCCTTTACGCCG
GGTACAATAGTTTTTACACGGTGGAGGGTGGGCACCGAGCTCTGTTGTTC
AACAGATTAATCGGTGTGAAAGAAGAAGTGTACATGGAGGGAATGCATTT
TATGATTCCCTGGTTCGACATGCCCATCATTTACGACATCCGCCCCAAGC
CCCGGATGATCCAGTCCTTGACAGGAAGCAAAGacaTGCAAATGGTCAAC
ATCACCATCCGCGTTTTGTCTAAGCCCGACTCGGCTCAACTCCGCTGGAT
CTTCCGCACCTTGGGTCGCGACTACGACGAGcgtgtcctcccttccatcg
tcAACGAGGTCTccaaggccgtggtggccaAGTACAACGCCGCGGAGCTC
TTGACGAAGCGTGAGATGGTCTCCACCCAAATCCGGTTGCAGTTGGAGAA
GCGTGCGAAGGAGTTTCGGATCGTCCTGGACGACGTGTCGATCACCCACT
TGACCTTCTCCCGGGAGTACACGAACGCGGTCGAGGCCAAGCAAGTTGCT
CAACAGGAAGCCGAGCGCGCGAAATATGTGGTAATGAAAGCGAAccaaga
aaaggaagccaTCATTATcaaagcggagggagaggcccaATCCGCTGCTC
TGGTGGGTAAGGCCATTCGAGAGAATCCTGCTTTTATCAAGCTGCGCAAA
ATCGACGCAGCCAGGGACATTGCGAATGTCGTGTCCTCTTCGGGTCAGAA
GGTCTATCTGTCTGCGGACTCCCTCTTGTTGAATATGTACTCGGGCGACG
AAGAGAAGTCTGGAAAGAAGCGGTAGATGAATGCAGCCAAGAAGTTTGCC
GAGAACCTGGGTAGCAAAATTCCCAAGGGTGCTGGCATGGGGGGTggcgc
gggtggcgggggtggagggggtggcccCGGGGGCATGTCTCCAGCAGGAC
CGCTGGGAGCCTTGCTAGGTGTGACGGGCATCCTTTACGCCGGGTACAAT
AGTTTTTACACGGTGGAGGGTGGGCACCGAGCTCTGTTGTTCAACAGATT
AATCGGTGTGAAAGAAGAAGTGTACATGGAGGGAATGCATTTTATGATTC
CCTGGTTCGACATGCCCATCATTTACGACATCCGCCCCAAGCCCCGGATG
ATCCAGTCCTTGACAGGAAGCAAAGacaTGCAAATGGTCAACATCACCAT
CCGCGTTTTGTCTAAGCCCGACTCGGCTCAACTCCGCTGGATCTTCCGCA
CCTTGGGTCGCGACTACGACGAGcgtgtcctcccttccatcgtcAACGAG
GTCTccaaggccgtggtggccaAGTACAACGCCGCGGAGCTCTTGACGAA
GCGTGAGATGGTCTCCACCCAAATCCGGTTGCAGTTGGAGAAGCGTGCGA
AGGAGTTTCGGATCGTCCTGGACGACGTGTCGATCACCCACTTGACCTTC
TCCCGGGAGTACACGAACGCGGTCGAGGCCAAGCAAGTTGCTCAACAGGA
AGCCGAGCGCGCGAAATATGTGGTAATGAAAGCGAAccaagaaaaggaag
ccaTCATTATcaaagcggagggagaggcccaATCCGCTGCTCTGGTGGGT
AAGGCCATTCGAGAGAATCCTGCTTTTATCAAGCTGCGCAAAATCGACGC
AGCCAGGGACATTGCGAATGTCGTGTCCTCTTCGGGTCAGAAGGTCTATC
TGTCTGCGGACTCCCTCTTGTTGAATATGTACTCGGGCGACGAAGAGAAG
TCTGGAAAGAAGCGGTAG back to top
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