EWM26807.1, cds3854 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|585108898|gb|EWM26807.1| (Prohibitin [Nannochloropsis gaditana]) HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query: 1 MNAAKKFAENLGSKIPKGAGMGGGAGGGGGGGGPGGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 313
MNAAKKFAENLGSKIPKGAGMGGGAGGGGGGGGPGGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR
Sbjct: 1 MNAAKKFAENLGSKIPKGAGMGGGAGGGGGGGGPGGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 313
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|553185653|ref|XP_005854286.1| (hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526] >gi|422294777|gb|EKU22077.1| hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query: 37 MSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 313
MSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR
Sbjct: 1 MSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 277
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|676379857|ref|XP_009033207.1| (hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens] >gi|323456254|gb|EGB12121.1| hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens]) HSP 1 Score: 365.155 bits (936), Expect = 1.742e-123 Identity = 176/287 (61.32%), Postives = 230/287 (80.14%), Query Frame = 0
Query: 30 GGGGPGGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGD---EEKSGKKR 313
G P G P G + A+ G++ + + GYNS +TV+GG RA+L++R+ GVK+ VY EGMH +P + P+ +D+R +PR +QSLTGSKD+QMVNIT+RVLSKP++++L WI++ LG DYD+RVLPSIVNEV+KAVVA YNA+ELLTKRE VS +IR +L RA +FRI+LDDVSITHL+FS EYT AVEAKQVAQQ++ERA+Y+V KA QEK++II+KAEGEAQSA L+GKAI+ NP F+KLRKID A++IA V+ S KVYL+ADSLL+N+ + E+ S KKR
Sbjct: 26 GSQMPQGGPPTGLVSAVAGISAVGFLGYNSVFTVQGGQRAVLWSRISGVKDAVYAEGMHPRVPLIEYPVPFDVRTRPRNVQSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEKKSIIVKAEGEAQSARLIGKAIQNNPGFVKLRKIDTAKEIAGTVARSQGKVYLNADSLLINILGNEQLGEDTSAKKR 312
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|219119880|ref|XP_002180691.1| (prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408164|gb|EEC48099.1| prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 349.747 bits (896), Expect = 2.124e-118 Identity = 166/244 (68.03%), Postives = 205/244 (84.02%), Query Frame = 0
Query: 58 NSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNM 301
NS YTV+GGHRA++FNRL+G+KE VY EG++F IPW + PIIYDIR +P +Q+LTGSKD+QMV I IRVL KP+ QL WI+R LG +YDERVLPSI+NE +KAVVA+YNA ELLTKR++VS +I LEKRA+ F I L+DV+ITHL FS EY AVEAKQVAQQ+AERAKY+V+ A QEK+ II KA GEA+SA L+G A+R+NP F+KLR+IDAARDIA++V+SSG KVYL+ADSLLLN+
Sbjct: 1 NSVYTVQGGHRAVVFNRLVGMKETVYGEGLNFNIPWLERPIIYDIRTRPVNLQTLTGSKDLQMVTIAIRVLHKPNPNQLVWIYRMLGINYDERVLPSIMNECAKAVVARYNANELLTKRDVVSKEISFDLEKRARIFNIQLEDVAITHLAFSPEYARAVEAKQVAQQDAERAKYIVLGAQQEKKTIITKARGEAESAELIGTAVRQNPGFMKLRRIDAARDIADIVASSGNKVYLNADSLLLNL 244
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|168003594|ref|XP_001754497.1| (predicted protein [Physcomitrella patens] >gi|162694118|gb|EDQ80467.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 348.977 bits (894), Expect = 2.804e-117 Identity = 168/276 (60.87%), Postives = 223/276 (80.80%), Query Frame = 0
Query: 39 PAGPLGALLGVTGI-LYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYS-GDEEKSGKK 312
PAG L L+ + G+ LY NS Y VEGGHRA++FNR++GVK++VY EG HFMIPWFD P+IYD+R +P +++S +GS+D+QMV IT+RVL++P + +L I+RTLG+DY ERVLPSIV E KAVVA+YNA++L+T+RE+VS +IR L++RA F I LDDVSIT+LTF RE+T A+EAKQVA Q+AERAK+VV KA Q+K + II+A+GEA+SA L+G+AI NPAFI LRKI+A+R+IAN +S+S +V+LSADSLLLN+ G EE S K+
Sbjct: 16 PAGALAKLVVIGGLGLYGAVNSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFDRPVIYDVRARPNIVESTSGSRDLQMVRITLRVLTRPMADRLPTIYRTLGQDYAERVLPSIVQETLKAVVAQYNASQLITQREVVSREIRRILQERATSFNIALDDVSITNLTFGREFTAAIEAKQVAAQDAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGEAISNNPAFITLRKIEASREIANTISTSQNRVFLSADSLLLNLQDMGVEEISLKQ 291
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|1210527749|dbj|GAX13506.1| (hypothetical protein FisN_27Lu002 [Fistulifera solaris]) HSP 1 Score: 348.206 bits (892), Expect = 6.350e-117 Identity = 167/274 (60.95%), Postives = 216/274 (78.83%), Query Frame = 0
Query: 35 GGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEK 308
+ A +GAL + Y YNS YTV+GGHRA++FNR +G+K+ VY EG++F IPWF+ P+I+DIR +P +Q+LTGS D+QMV I IRVL KPD +L WI+R LG +YDERVLPS++NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA F I+L+DV+ITHL FS EY AVEAKQVAQQ+AER KY+VM A QEK+ II KA GEA+SA L+G+A+R+NP F+KLR+IDAARDIA++V+SSG K+YL+AD+LLLN+ +EK
Sbjct: 19 AAQAAARSIGALASAAVLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSVMNECAKAVVARYNANELLTKRDEVSREISLDLQKRASNFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 292
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|1072231750|gb|OEU16482.1| (prohibitin 2 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 347.821 bits (891), Expect = 1.246e-116 Identity = 168/274 (61.31%), Postives = 219/274 (79.93%), Query Frame = 0
Query: 43 LGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMY-SGDE--EKSGKKR 313
+ AL G+ Y YNS YTV GGHRA++FNR+ G+K+ VY EG++F IPWF+ PIIYDIR +P +Q+LTGSKD+QMV I +RVL KP+ +L WI++TLG +YDER+LPS++NE +KA+VA+YNA ELLTKR++VS I L++RA +F IVLDDV+ITHL+FS EY AVEAKQVAQQ+AE+AKYVV+ A QEK+ II +A GEA+SA L+G A+++NP F+KLR+ID ARDIA++V+ SG KVYL+ADSLLLN+ DE EKS KK+
Sbjct: 39 VTALAVAGGLAYGTYNSIYTVPGGHRAVMFNRVTGMKDSVYGEGLNFNIPWFERPIIYDIRTRPVNLQTLTGSKDLQMVTIAVRVLHKPNPNKLVWIYQTLGMNYDERILPSVMNESAKAIVARYNANELLTKRDLVSRAISEDLQRRASQFNIVLDDVAITHLSFSPEYARAVEAKQVAQQDAEKAKYVVLGAQQEKKTIITRARGEAESAELIGLAVKKNPGFMKLRRIDVARDIADIVAKSGNKVYLNADSLLLNLVGDADEKFEKSIKKK 312
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|857979271|emb|CEO94790.1| (hypothetical protein PBRA_003603 [Plasmodiophora brassicae]) HSP 1 Score: 347.821 bits (891), Expect = 1.326e-116 Identity = 162/278 (58.27%), Postives = 213/278 (76.62%), Query Frame = 0
Query: 24 GAGGGGGGGGPGGMSPAGPLGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNM 301
AG GPG + L G I Y GYNS +T GGHRA+++NR++GVK+ VY EGMHFMIPWF+ P I+D+R KP+ I S TG++DMQMVNI++RVL KPD +QL IFR G DYD+R+LPSIVNE KAV+A+YNA++L+TKRE +S +IR L++RAK+F I+LDDVSITHL+F EYT AVE+KQVAQQEAERAK++V +A Q+K + II AEGEAQSA ++GKA+ NP F++LR+++AA+ I+ +SSS KVYL+A+ LLLN+
Sbjct: 3 AAGAARNFSGPGAGAVGKLAATLFGAGAIAYGGYNSLFTCPGGHRAVMYNRVVGVKDAVYPEGMHFMIPWFETPTIFDVRTKPKKISSPTGTRDMQMVNISLRVLYKPDISQLPTIFRRFGSDYDDRILPSIVNETLKAVIAQYNASQLITKREQISREIRNHLQERAKDFYILLDDVSITHLSFGSEYTAAVESKQVAQQEAERAKFIVERALQDKRSNIIHAEGEAQSAEMIGKALARNPGFVELRRMEAAKKISGALSSSPNKVYLNAEGLLLNL 280
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|1210520650|dbj|GAX20499.1| (hypothetical protein FisN_24Hu251 [Fistulifera solaris]) HSP 1 Score: 347.821 bits (891), Expect = 1.535e-116 Identity = 167/266 (62.78%), Postives = 214/266 (80.45%), Query Frame = 0
Query: 43 LGALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEK 308
+GAL + Y YNS YTV+GGHRA++FNR +G+K+ VY EG++F IPWF+ P+I+DIR +P +Q+LTGS D+QMV I IRVL KPD +L WI+R LG +YDERVLPSI+NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA F I+L+DV+ITHL FS EY AVEAKQVAQQ+AER KY+VM A QEK+ II KA GEA+SA L+G+A+R+NP F+KLR+IDAARDIA++V+SSG K+YL+AD+LLLN+ +EK
Sbjct: 42 IGALASAAVLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSIMNECAKAVVARYNANELLTKRDEVSREISLDLQKRAANFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 307
BLAST of EWM26807.1 vs. NCBI_GenBank
Match: gi|551586008|ref|XP_005778118.1| (putative prohibitin [Emiliania huxleyi CCMP1516] >gi|551602360|ref|XP_005782759.1| hypothetical protein EMIHUDRAFT_442545 [Emiliania huxleyi CCMP1516] >gi|485630473|gb|EOD25689.1| putative prohibitin [Emiliania huxleyi CCMP1516] >gi|485635680|gb|EOD30330.1| hypothetical protein EMIHUDRAFT_442545 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 346.665 bits (888), Expect = 1.996e-116 Identity = 164/268 (61.19%), Postives = 213/268 (79.48%), Query Frame = 0
Query: 35 GGMSPAGPLG-ALLGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNM 301
GG +P G LG +G+TG+ Y N + VEGGHRA++++R GV++ V EG H ++PWF P++YD+R KPRMIQSLTGSKD+QMVNI++RVLS+PD L I+R LG DYDERVLPSIVNEV K+VVA+YNA++L+T+RE VS +IR L RA+EF + LDDVSITHL+F +EYT AVEAKQVAQQEAERAK+VV KA QEK++ +IKA+GEA+SA L+G A+R+NP +I+LR+++AARD+A +S S KVYL SLLLN+
Sbjct: 19 GGGAPMGALGLGAVGLTGLAYGSANCLFNVEGGHRAVMYHRFGGVQQRVRGEGTHLVLPWFQRPVLYDVRAKPRMIQSLTGSKDLQMVNISLRVLSRPDPGFLPTIYRELGTDYDERVLPSIVNEVLKSVVAQYNASQLITQREAVSQRIRTDLLSRAREFHLELDDVSITHLSFGKEYTAAVEAKQVAQQEAERAKFVVDKAKQEKKSTVIKAQGEAKSAKLIGDAVRDNPGYIQLRRLEAARDVAGTLSKSTNKVYLDTQSLLLNV 286 The following BLAST results are available for this feature:
BLAST of EWM26807.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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