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Properties
| Property Name | Value |
|---|
| Product | urease accessory protein |
| Orig transcript id | gnl|cribi|Naga_100097g13.3741.mrna |
| Orig protein id | gnl|cribi|Naga_100097g13.3741 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:157657..158943 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3828 ID=rna3828|Name=rna3828|organism=Nannochloropsis gaditana|type=mRNA|length=1377bp
ATGCGGCACTTCTTCTCTTTGAGCCCAGTGCGTGGCCAAAAGAATCATCT
TGATCTCAACAACACCTACGCATGTCATCTTTCCTCCTCCCACCGGTCAA
AGCAGCGCAAGGTGCATTTTTCTTTGGAGCCACACGCCGTTCTTCCTGCC
TCGTCGAGGGCTTCTCACGCCGTTCCCTTCGTCTTCTTGTCCACCCTCTT
CCTACGCTTACAAAACCGCACATCCATCATCATGGAAGTAGACGATGAAG
AATTGCGGCCCTTGAAGGACCTGCTGGATGATTTATGCGCCTCTCCTTTG
CCTATCACCAAAGAGAAAATCTCTAAGGTGGCTGAATGCGCGCTGCGATA
CGTGCAAAAGTATAAAAAGGTGGTGCACATGATCGAACGGTATGCCAAGC
ATTACGCCGGAGTCCGCTATCGTTCGGCCGTCATTTGCGTGATCGACTCC
CTTTGCACGAAAGCGCACCGGGCGCACAAAGAAAAAGATGTCTTCATACC
CCGGTTTCGCCTCCGCCTGCTGGAGACATTGCAAGGCGTGACGACCTTGG
AAGGTCGTTCGGAGCGGGCTTTGATGGACCGAATTTTCGTGGAGTGGCGA
AAACGAGGATGGTTCGACGTCCCACCCTTGGCAACGCTGGCGGGCGAGAA
GGAGGGAAAACCGACGCGCGGCACCCAAAACCCCCAAGGACAGGAAGGGC
CCCGCAAAAGAGGGAAAAAGCGAACCGGAAGCACGGAAGTGCTCGAGTCC
ACCACCCCACCGTACGACCCGCCCAGGACAAGCCGCGGGGTGCCGGGGAG
GCTGACAGAGGACGGCATGACCTCCCCCCAAAATGAGGAAGGACTTGGTT
CTCCCACCCCCCTGTCCCCTCCTACCTCCCCCTCCCCCGTCGCCCAGACT
GCGGCCTCGCCTCCCTCCCCGGCATCAGACCCCAGCAGCGGTAGCGCCGC
CAAGTCGGTACTCAAGAAATTTCTGGCGGGTTTTTGCGCGAAAGAAGGAG
GGAAGGTGCCTGCGTGGCCACAGACTTTTTTGGCCTCCCTCCCGTCCTCG
GTGCCACCCTCCTTGCACATCCCTCCCCTCTCCACGTCGTCCTTCTTCCC
CGTCGTGCCCGTGCCACGCGCTGTCTGGTTGGGAGAAGGAAGGGAGGGAG
AGGAGGAGGGCGGGCGGGCAAGCTCCGGGTATGTTGTGAGTGCGGTGCCG
GGCCTGTACGTGACCCTTTCCCGGACGGCCAGGGAGGAAGGAGGAAAGGG
AGGAGGGAAGGAAAGAGGGGAAGAAGGAGGAGGAGAAGTAGAGGGAGGCG
TGGGAGGAGACGGACAGGCTGTGACGAAGAAAGCGGTTGGTCGGCAGTGG
GGAAGGCCCCCGGCAACCTTGGCCTGA back to topprotein sequence of rna3828 >rna3828-protein ID=rna3828-protein|Name=rna3828|organism=Nannochloropsis gaditana|type=polypeptide|length=296bp
MESYAPSTVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEM
RVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMV
SRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLR
TARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQA
LGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVV
GRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS back to topmRNA from alignment at CM002462.1:157657..158943+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3828 ID=rna3828|Name=rna3828|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp|location=Sequence derived from alignment at CM002462.1:157657..158943+ (Nannochloropsis gaditana)
ACGCATGTACATCAAGAAACCGTACACGGCGCACAAAAATTGACATCCCG
AAGGCATCATGGATTTTTGAGAGTTCATGTTTATGTCCACATTTTCTGCA
GCTTGTGTGCTTTTGAGGCGTTGCAATCGTGCGATGCTGACGTCCAAACC
CGTCACCCTGCTTCTAATTTTGACTGTACTTTGTACAACAAATCTTTCGT
ACACAGGCATGTTTGCATTTGAGAAAGTACTGCATCGAGAAATTGGTCGC
AGCAACATGCACCCCCGGGAATAGAACTTATGGTGTGTAAGCGTTGTATG
CCTGCGAGACCCCATGGAATCCTATGCCCCTTCCACTGTCTCGTGGGTAA
TCTGGCAATTACTGGATTCAAACTTGCCCACCGGGGGTTTCGCGCATTCG
TATGGCCTTGAAGCAGCGCTGCAACTGAAGCATTTCGATCTCCAGAGCGT
CGATGAGGAAATGCGTGTCACTGGCTTGCTTGCCTTTGCCCGCCAGACAA
TGGAGCAACAGGCCTCTCTTCTCTTGCCCATGGTCAGTGCTGCACACCAT
GCAGCGAAGGACGCGACGGCACTCTTAAAGTGTACAGATGCCGGTTCATC
TGTGTCCATGGTATCTCGTTGGGCAACACTCGATAAAGAATGCCATGCAC
TGATAACCACGGAAGGTGGCCGTAGGGCTTCGACTGCTCAAGGCCTAGCA
CTGCTCCGATTAGCTTGCGACAacatcccctctctctcttcccagcACTG
TCAATGGCTGCGTACTGCCAGGGATCTGATCCGAGGGCGGGTAGGATACA
GATACAGGGACGACGCGGCGGGCGAATCGGAGTCTTTGGGAGTTTCACAC
GACATGTCCATCCTATCGGCCAGAGGGCATCAAGCTCCAGTCTTTGGTTG
GCTATGTCAGGCTTTAGGGGTGGACGCGGTCACGTGTTTCCGCATGTTCT
GTTACCTGGTTTTAAGGGACTTGATGGCAGCTGCCACGCGTCTGGGCCTG
GTGGGTCCCCTGGCTGCGGTTCGTTTGCAGATGACGTTGTACGGGGACGC
GGAAGCCGTGGTGGGGCGCTTTCTGGAACAGGAAGCTTCAGAAAGAGCaa
caggaggaaaggaaggagggaggggtccaCGACAGGAGAATCCATTGCTG
GATATTTTGCAAGGTGCCCACGAAAAATTGTATTCTCGACTGTTCATAAG
TTAACCAATTGACGCACAAAGACATCAAAAAAGTCGGGGAAGTCTGTGCA
ATCTTGACATAGATTTGACCTGACGATGCATCGGTCA back to topCoding sequence (CDS) from alignment at CM002462.1:157657..158943+ >rna3828 ID=rna3828|Name=rna3828|organism=Nannochloropsis gaditana|type=CDS|length=891bp|location=Sequence derived from alignment at CM002462.1:157657..158943+ (Nannochloropsis gaditana)
ATGGAATCCTATGCCCCTTCCACTGTCTCGTGGGTAATCTGGCAATTACT
GGATTCAAACTTGCCCACCGGGGGTTTCGCGCATTCGTATGGCCTTGAAG
CAGCGCTGCAACTGAAGCATTTCGATCTCCAGAGCGTCGATGAGGAAATG
CGTGTCACTGGCTTGCTTGCCTTTGCCCGCCAGACAATGGAGCAACAGGC
CTCTCTTCTCTTGCCCATGGTCAGTGCTGCACACCATGCAGCGAAGGACG
CGACGGCACTCTTAAAGTGTACAGATGCCGGTTCATCTGTGTCCATGGTA
TCTCGTTGGGCAACACTCGATAAAGAATGCCATGCACTGATAACCACGGA
AGGTGGCCGTAGGGCTTCGACTGCTCAAGGCCTAGCACTGCTCCGATTAG
CTTGCGACAacatcccctctctctcttcccagcACTGTCAATGGCTGCGT
ACTGCCAGGGATCTGATCCGAGGGCGGGTAGGATACAGATACAGGGACGA
CGCGGCGGGCGAATCGGAGTCTTTGGGAGTTTCACACGACATGTCCATCC
TATCGGCCAGAGGGCATCAAGCTCCAGTCTTTGGTTGGCTATGTCAGGCT
TTAGGGGTGGACGCGGTCACGTGTTTCCGCATGTTCTGTTACCTGGTTTT
AAGGGACTTGATGGCAGCTGCCACGCGTCTGGGCCTGGTGGGTCCCCTGG
CTGCGGTTCGTTTGCAGATGACGTTGTACGGGGACGCGGAAGCCGTGGTG
GGGCGCTTTCTGGAACAGGAAGCTTCAGAAAGAGCaacaggaggaaagga
aggagggaggggtccaCGACAGGAGAATCCATTGCTGGATATTTTGCAAG
GTGCCCACGAAAAATTGTATTCTCGACTGTTCATAAGTTAA back to top
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