EWM26850.1, cds3819 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|585108945|gb|EWM26850.1| (urease accessory protein [Nannochloropsis gaditana]) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
Query: 1 MESYAPSTVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
MESYAPSTVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS
Sbjct: 1 MESYAPSTVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|302780637|ref|XP_002972093.1| (hypothetical protein SELMODRAFT_96579 [Selaginella moellendorffii] >gi|302781720|ref|XP_002972634.1| hypothetical protein SELMODRAFT_97029 [Selaginella moellendorffii] >gi|300160101|gb|EFJ26720.1| hypothetical protein SELMODRAFT_97029 [Selaginella moellendorffii] >gi|300160392|gb|EFJ27010.1| hypothetical protein SELMODRAFT_96579 [Selaginella moellendorffii]) HSP 1 Score: 155.992 bits (393), Expect = 6.360e-43 Identity = 113/288 (39.24%), Postives = 147/288 (51.04%), Query Frame = 0
Query: 11 WVIWQLLDSNLPTGGFAHSYGLEAALQLKHF-DLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIR-GRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
WV+WQL+DS PTGGFAHSYGLEAA+Q D +S+D F + T+E SLLLP VSA+ K D V+ W LD+ +A ++ RRAS++QG ALLR A P L+ L R ++R GR A GH A VFG +C L +DA+TC R + YL LRD+++AATRL LVGPL A +Q +L G EAVV ++ ++R G Q +PLLD Q H+ L+SRLF S
Sbjct: 13 WVVWQLVDSFFPTGGFAHSYGLEAAVQAGLVSDSKSLD---------TFIKSTLENSGSLLLPFVSAS----------FKLPD-------VAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRAGR--------------------------ASGHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATRLNLVGPLQAAAMQQSLRGFGEAVV-----RKCADR------GVEDACQVSPLLDTAQACHDHLFSRLFCS 232
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|1206271544|ref|NP_001339368.1| (urease accessory protein F [Zea mays] >gi|670403884|ref|XP_008643580.1| urease accessory protein F isoform X1 [Zea mays] >gi|670403887|ref|XP_008643581.1| urease accessory protein F isoform X1 [Zea mays] >gi|194705550|gb|ACF86859.1| unknown [Zea mays] >gi|1142704791|gb|AQK68715.1| Urease accessory protein F [Zea mays]) HSP 1 Score: 156.377 bits (394), Expect = 1.353e-42 Identity = 107/292 (36.64%), Postives = 149/292 (51.03%), Query Frame = 0
Query: 8 TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACD---NIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
++ W WQ+LDS LPTGGFAHSYGLEAA+Q + + Q E++R +F Q ++ SLLLP V C AG S + WA LD+ A +T E R+AS AQG ALLR+A +P+L ++L R +G + S H APVFG +C +G D T R + ++ +RD+++AATRL L+GPLAA LQ L DAE +V ++ +++ SE + Q PLLD +QG H ++SRLF S
Sbjct: 39 SLHWTQWQILDSILPTGGFAHSYGLEAAMQSRVVNDQ---EDLR-----SFVVQVLDSAGSLLLPFV--------------HCACAGKSPGDAAAWAKLDRLLDATLTNEVARKASAAQGSALLRVAASVFAEVPAL-----------QELRRTLLGSK---------------------SVSFHHAPVFGLVCGLVGFDGETAQRAYMFVTMRDVLSAATRLNLIGPLAASVLQHQLAPDAERMVRKWRDRDVSEAS-----------QTAPLLDAVQGCHAYMFSRLFCS 265
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|226502096|ref|NP_001147186.1| (urease accessory protein F [Zea mays] >gi|195608234|gb|ACG25947.1| urease accessory protein F [Zea mays]) HSP 1 Score: 154.451 bits (389), Expect = 7.659e-42 Identity = 106/292 (36.30%), Postives = 148/292 (50.68%), Query Frame = 0
Query: 8 TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACD---NIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
++ W WQ+LDS LPTGGFAHSYGLEAA+Q + + Q E++R +F Q ++ SLLLP V C AG S + WA LD+ A +T E R+AS AQG ALLR+A +P+L ++L R +G + S H APVFG +C +G D R + ++ +RD+++AATRL L+GPLAA LQ L DAE +V ++ +++ SE + Q PLLD +QG H ++SRLF S
Sbjct: 39 SLHWTQWQILDSILPTGGFAHSYGLEAAMQSRVVNDQ---EDLR-----SFVVQVLDSAGSLLLPFV--------------HCACAGKSPGDAAAWAKLDRLLDATLTNEVARKASAAQGSALLRVAASVFAEVPAL-----------QELRRTLLGSK---------------------SVSFHHAPVFGLVCGLVGFDGEAAQRAYMFVTMRDVLSAATRLNLIGPLAASVLQHQLAPDAERMVRKWRDRDVSEAS-----------QTAPLLDAVQGCHAYMFSRLFCS 265
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|729439914|ref|XP_010521247.1| (PREDICTED: urease accessory protein F isoform X2 [Tarenaya hassleriana] >gi|729439917|ref|XP_010521249.1| PREDICTED: urease accessory protein F isoform X2 [Tarenaya hassleriana]) HSP 1 Score: 153.295 bits (386), Expect = 1.504e-41 Identity = 108/294 (36.73%), Postives = 148/294 (50.34%), Query Frame = 0
Query: 6 PSTVS---WVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
PST S W WQLLDS LPTGGFAHS+GLE+A+Q + L S E++ F ++ LLLP V A + + W LD+ +A +T E R+AS +QG AL R+A + S L+T RD SLG S ++S H AP+FG +C LG+DA T R + ++ LRDL++AATRL LVGP+ A +Q + AE V+GR++++ A E Q +PLLD++QG H L+SRLF S
Sbjct: 24 PSTASRMQWSQWQLLDSILPTGGFAHSFGLESAVQSR---LISSPEDLET-----FIIHVLDNTGGLLLPFVYTATKSPD-----------------IETWHKLDQMLNATLTNEISRKASMSQGSALFRVAASVFTEIPS-----LKTIRD------------------ASLG-SKNISC-----HHAPIFGLICGLLGIDAETSQRAYLFITLRDLVSAATRLNLVGPIGASVMQHRISALAEGVLGRWIDRPAEEAC-----------QTSPLLDVVQGCHSYLFSRLFCS 252
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|729439909|ref|XP_010521246.1| (PREDICTED: urease accessory protein F isoform X1 [Tarenaya hassleriana]) HSP 1 Score: 153.295 bits (386), Expect = 1.781e-41 Identity = 108/294 (36.73%), Postives = 148/294 (50.34%), Query Frame = 0
Query: 6 PSTVS---WVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
PST S W WQLLDS LPTGGFAHS+GLE+A+Q + L S E++ F ++ LLLP V A + + W LD+ +A +T E R+AS +QG AL R+A + S L+T RD SLG S ++S H AP+FG +C LG+DA T R + ++ LRDL++AATRL LVGP+ A +Q + AE V+GR++++ A E Q +PLLD++QG H L+SRLF S
Sbjct: 31 PSTASRMQWSQWQLLDSILPTGGFAHSFGLESAVQSR---LISSPEDLE-----TFIIHVLDNTGGLLLPFVYTATKSPD-----------------IETWHKLDQMLNATLTNEISRKASMSQGSALFRVAASVFTEIPS-----LKTIRD------------------ASLG-SKNISC-----HHAPIFGLICGLLGIDAETSQRAYLFITLRDLVSAATRLNLVGPIGASVMQHRISALAEGVLGRWIDRPAEEAC-----------QTSPLLDVVQGCHSYLFSRLFCS 259
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|1149773185|ref|XP_020150594.1| (urease accessory protein F [Aegilops tauschii subsp. tauschii] >gi|1149773187|ref|XP_020150595.1| urease accessory protein F [Aegilops tauschii subsp. tauschii] >gi|1149773189|ref|XP_020150596.1| urease accessory protein F [Aegilops tauschii subsp. tauschii] >gi|1149773193|ref|XP_020150597.1| urease accessory protein F [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 151.369 bits (381), Expect = 9.957e-41 Identity = 111/301 (36.88%), Postives = 153/301 (50.83%), Query Frame = 0
Query: 3 SYAPSTVS-------WVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
S P+T S W WQLLDS LPTGGFAHSYGLEAA+Q + + Q E++R+ F Q ++ SLLLP V A + DA A W LD+ A +T E GR+AST+QG ALLR+A ++ +DL R +G S VS H AP+FG +C +G D+ T R + ++ +RD+++AATRL L+GPLAA LQ + DAE ++ ++ +++ SE + Q PLLD LQG H ++SRLF S
Sbjct: 22 SQVPATASSMHQQLFWSQWQLLDSILPTGGFAHSYGLEAAMQSRIVNNQ---EDLRL-----FLIQVVDNIGSLLLPFVFCASR-SPDAAA----------------WVKLDQLLDATLTNEVGRKASTSQGSALLRVAASVFTE--------IQPLQDLRRTFLG------------STSVSF---------HHAPIFGLICGLVGFDSETTQRAYMFVAMRDVISAATRLNLIGPLAASVLQHQVAPDAEKMLQKWRDRDVSEAS-----------QTAPLLDALQGCHAYMFSRLFCS 257
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|970014105|ref|XP_015068035.1| (PREDICTED: urease accessory protein F [Solanum pennellii] >gi|970014107|ref|XP_015068036.1| PREDICTED: urease accessory protein F [Solanum pennellii]) HSP 1 Score: 149.828 bits (377), Expect = 2.603e-40 Identity = 103/294 (35.03%), Postives = 146/294 (49.66%), Query Frame = 0
Query: 4 YAPSTV-SWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
+AP + W WQLLDS LPTGGFAHS+G+EAA+Q + L S E++R F +E SLLLP V + + V W LDK A +T E R+AS +QG ALLR+A Q +++T R++ A+G + R H AP+FG +C LG++A TC + + ++ +RD+++AATRL LVGPL A LQ L +AE + +++ + E Q +PLLD +QG H L+SRLF S
Sbjct: 14 FAPKELLQWSQWQLLDSVLPTGGFAHSFGVEAAIQAR---LVSGPEDLRT-----FVIHILENTGSLLLPFVYTLNTSPN-----------------VETWYKLDKILDATLTNEVSRKASISQGSALLRVAAAVF-----QEVPYVKTMREM----------SLASG--------------AVRFHHAPIFGLVCGLLGLNAETCQKAYLFITMRDVVSAATRLNLVGPLGAAVLQHQLAANAEDLSKKWMNRPVEEAC-----------QTSPLLDTIQGCHGYLFSRLFCS 242
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|242060640|ref|XP_002451609.1| (urease accessory protein F isoform X2 [Sorghum bicolor] >gi|1205955033|ref|XP_021315745.1| urease accessory protein F isoform X2 [Sorghum bicolor] >gi|241931440|gb|EES04585.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor] >gi|992169095|gb|KXG29549.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor] >gi|1174557452|gb|OQU84435.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor] >gi|1174557454|gb|OQU84437.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor]) HSP 1 Score: 150.214 bits (378), Expect = 2.691e-40 Identity = 104/289 (35.99%), Postives = 144/289 (49.83%), Query Frame = 0
Query: 8 TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
++ W WQ+LDS LPTGGFAHSYGLEAA+Q + + Q L +F Q ++ SLLLP V A K DA + W LD+ A +T E R+AST+QG ALLR+A SQ Q DL R +G + S H A +FG +C +G D+ T R + ++ +RD+ +AATRL L+GPLAA LQ + DAE ++ ++ +++ SE + Q PLLD+LQG H ++SRLF S
Sbjct: 36 SLQWTQWQILDSILPTGGFAHSYGLEAAMQSRMVNNQD--------DLKSFVIQVLDNTGSLLLPFVYCAS----------KSPDAAA-------WIKLDQLLEATLTNEVARKASTSQGSALLRVAASVFT--ESQALQ------DLRRTFLGSK---------------------SVSFHHASIFGLICGLVGFDSETAQRAYMFVTMRDVFSAATRLNLIGPLAASVLQHQVAPDAEGMMQKWRDRDVSEAS-----------QTAPLLDVLQGCHAYMFSRLFSS 259
BLAST of EWM26850.1 vs. NCBI_GenBank
Match: gi|1205955028|ref|XP_021315743.1| (urease accessory protein F isoform X1 [Sorghum bicolor] >gi|1205955030|ref|XP_021315744.1| urease accessory protein F isoform X1 [Sorghum bicolor] >gi|1174557451|gb|OQU84434.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor] >gi|1174557453|gb|OQU84436.1| hypothetical protein SORBI_3004G053600 [Sorghum bicolor]) HSP 1 Score: 150.599 bits (379), Expect = 5.082e-40 Identity = 104/289 (35.99%), Postives = 144/289 (49.83%), Query Frame = 0
Query: 8 TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQSVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLKCTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296
++ W WQ+LDS LPTGGFAHSYGLEAA+Q + + Q L +F Q ++ SLLLP V A K DA + W LD+ A +T E R+AST+QG ALLR+A SQ Q DL R +G + S H A +FG +C +G D+ T R + ++ +RD+ +AATRL L+GPLAA LQ + DAE ++ ++ +++ SE + Q PLLD+LQG H ++SRLF S
Sbjct: 67 SLQWTQWQILDSILPTGGFAHSYGLEAAMQSRMVNNQD--------DLKSFVIQVLDNTGSLLLPFVYCAS----------KSPDAAA-------WIKLDQLLEATLTNEVARKASTSQGSALLRVAASVFT--ESQALQ------DLRRTFLGSK---------------------SVSFHHASIFGLICGLVGFDSETAQRAYMFVTMRDVFSAATRLNLIGPLAASVLQHQVAPDAEGMMQKWRDRDVSEAS-----------QTAPLLDVLQGCHAYMFSRLFSS 290 The following BLAST results are available for this feature:
BLAST of EWM26850.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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