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Properties
| Property Name | Value |
|---|
| Product | plastid lipid associated protein |
| Orig transcript id | gnl|cribi|Naga_100097g9.3755.mrna |
| Orig protein id | gnl|cribi|Naga_100097g9.3755 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:145154..147409 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3824 ID=rna3824|Name=rna3824|organism=Nannochloropsis gaditana|type=mRNA|length=1478bp
TACGTACAGACTCCACCGTGGTTCTTGCCGTCTGGTCGCTGGCGTCCTCT
TGCTAGCTACGAATAGGCTTTTCTTGCCGAAGTACTATCCACAACACCCT
CATGGCGACGAAAAAGCTTTGGGGTGGCCGCTTCTCTGGCAAGGTTGATC
CTATCATGGAGAAATTTAACAATTCACTTGTGTTCGACCGCCGCATGTGG
GCTGTGGACCTGGCTGGCTCTATGGCGTACGCTAAAGCAATTTGCCTGGC
CGGCATCATATCCGAAGCGGAACGGGATGAGCTCTTGAGCGGGTTGTTAA
AGGTCAAAGCAGAATGGGCGGCAGACACGTTCGTAGTAAAAGACGGAGAC
GAAGACATCCACACAGCAAACGAGCGCCGGCTGACAGAAATAATCGGCCC
AACGGGAGGAAAGCTGCACACAGGACGCAGCCGCAATGACCAGGTCGCCA
CAGACGTGCGCCTCTACCTCCGGGAGGAGACCCGGCGTCTCCGATCCCTC
CTCGTCGAGCTCCTCCACACCATGACCAGCCTTGCCCGGGAGCACCTTCC
CCTCCTGATGGCCGGCTTCACTCACCTGCAGCCCGCCCAACCCATCCGCT
TCTCCCATTGGGTCATGTCGCACGCGGCTGCCTTGCTCAGGGACTTGCAA
CGTCTGGTGGACCAGGAGCAACGGATCAACGTCTTGCCCTTGGGAAGCGG
GGCTTTGGCGGGGCATGCCTTTGGGATCGACCGGGAATTCTTACGCCAAG
AGCTGGGCTTTGCAGGCGTGTCGTTGAACAGCTTGGACGCCGTCTGCGAC
AGGGATTTCATCGCCGAGTTCCTCTCGTGGGCTGCCCTGACCACGGTTCA
TCTCTCCCAGGTGGCGGAGGACCTGATCATCTACAATTACACAAAGCAAG
TGGGTCTCTCAGACGCCTACTCCACAGGATCCTCCCTCATGCCGCAGAAG
AAAAATCCCGACGCCTTGGAGCTCCTCCGTGGGAAGGCCGGCCGGGCCCT
CGGCGCTGCCACGGGCTTTTTGGCGACATTGAAAGGCCTTCCCCGCTCCT
ACAACAAGGATTTGCAGGAGGATAAAGAGCCCCTCTTCGACACCATCGAT
ACCATGGTGGCCGTGCTGCAGATCACGACAGGGGTTTTTGCCACGCTGAC
ACCGAACAAGGAGGCCCTGGCCGCCCAGGTAGGAGGAAACGGGAAGGACG
TCAGGTGATGAATCGGAAAAACCAATCGAGGAAAACCGAGGAGAAAAGTA
GGATGATCGAGGAAAGGTCCGGTCGCAGGGGGAAGGGAAAGGGAGAAAAA
GAGCGCCGAAGGAAGGCGCACGCATAAAGGGACAAATATTTGACGGCAGT
TCGACTACAAGCGCTCACGATATTCTAAATCACGACCAAATTGCGCATTA
AAGTACCGCTCAAGTGGATTCTCTTCCCGGTCCTCTCTCATTTTCCTGCC
CCTTCTCCATCTCCCTGCTCCCTTCCCT back to topprotein sequence of rna3824 >rna3824-protein ID=rna3824-protein|Name=rna3824|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MSVLVARRQLFLLVLLLIFLLLTPVVTHGFNFFPTRSSAGTAVKAGGPVS
KIKTELLRKAEEVSRGLEASQEQQESILALIKSLEKKNPTKSPTSSALIT
ARWRLVFTTSESILGKTRPAVFRPVGPIYQYINLARGTARNEEQIRPIPF
LPAIEEAIDATIEPVSSQRVNVFFQRLFLGPLNFKFQSENYLDTTYLDKD
MRISRSGFIFYRPLLRSSSCCVLCF back to topmRNA from alignment at CM002462.1:145154..147409- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3824 ID=rna3824|Name=rna3824|organism=Nannochloropsis gaditana|type=mRNA|length=2256bp|location=Sequence derived from alignment at CM002462.1:145154..147409- (Nannochloropsis gaditana)
TAATGCATCGGTGGCGTAGGATACCGTGCGCTTCTCCTTTTCTTACTCGC
ATAACTTGCCCAAAATGTACGCCAAGAAGGTCCCAATGCTTGCTCAGCAG
TAGAAATGTGACGCCACGTATGCGCCGAAGTCATGTTTCTGGTAAAGTCT
CTGTCACACAGGTGCTCGACGAGTTTTGGTAGAAAGCGGTACACCGATAG
ATGTACTTATCTATCTATAATATTACAGACTTTCTTGTCGGAGGGTTACG
TTTGTCCGATGAGTTGAACGTGCAATAAATCCGTACCGCATTCGGACATG
GAAATTGCGTGTTGCCTGATGCCTCAACGTGTACACATTATCATAACCAC
AGCTCATATCCATACACAACGTGCATAAGAAATTTAAGTAAGTACGGCCG
GTACTGAACGAACGATGTCAGTTTTAGTCGCCCGCCGTCAATTATTCCTC
CTTGTCCTCCTATTGATCTTCCTGCTGCTCACTCCTGTGGTGACCCACGG
CTTTAATTTCTTCCCGACACGATCATCCGCCGGCACCGCGGTTAAAGCAG
GAGGTCCTGTGTCAAAGGTGAGTGTGTGTCTGTTTTGAAGTGTCCTTTTA
GATTGAATTGGCCGGGGAGGAGATGGAGTTCTAGTCAGTGAAAGGAAGCT
GAAAGGCGCACGGATAATGTTACGTTGCAGGTTGTATTAAAGTTTATTGG
GATCAAAGCCACGATGCTATCAATATTCTAAGCGCATAAGCCATTCTGTT
GAGAAAATCATTTCAGCCCACCATTGCCATGCACGTACACTTCAATCTGC
ACAGATCAAAACCGAGCTGCTCCGGAAAGCCGAAGAAGTCTCCCGGGGCC
TGGAAGCAAGTCAGGAGCAACAAGAATCGATCCTGGCGCTTATCAAAAGC
CTCGAGAAGAAGAACCCTACGAAATCGTACGTCCTCCTCTCCCTTCGCCT
TCAGACCATCCTGTGCCCAGTGGGGTCCACGCGGGGTTTCCCCTTATCCC
TCCCCGGACTCAGTTCCCCGTTTCCCCGTGACGTTTCCTCCTCCTTCCTA
TCTCATCGTCGCTACGCATCTGTCGAGTCTTCTTTCCTTCTAATCACCAG
ACCTTAGCTCGTTAACTTTCTTTGGTTTTGAGATGATACCCAGAGACGGG
AGTCCTGGCTCTGCATTCCCTCTTTCCGAGCATTATCCCTCCGAACACAT
ATTTCATCATTACATACACATCCATCGCAAATCAATTGGCACCTGCTCTG
TCTCCTCCCTGCCCTCCTTCCTTCCTTTCCTTCCCTCCCCATCAGTCCCA
CTTCCTCGGCCCTCATCACCGCCCGCTGGCGCCTGGTCTTTACCACCAGC
GAGTCCATCCTAGGCAAAACCCGCCCCGCAGTCTTCCGTCCCGTGGGCCC
GATCTATCAATACATTAACCTGGCCCGAGGCACAGCCAGGTAGGGGTGCG
ATAGAGGGGGGAAGGGAAGAAAAGTACCGGGGATCGGTTTGGCGGTCAGC
TCGCGTTCACTTGTGAAGGGGAAGGGGGGGAGGCAGGGCTTTTGGCGCGA
GCTTGGTTTGGGACTGACCAAAAATCACGTCCCTGTCGGTTTTCTCGTTT
CGTTATTTTGGGGGACAACGACAGGAACGAGGAACAGATACGCCCGATTC
CCTTCCTTCCCGCCATCGAAGAGGCCATCGATGCCACCATCGAGCCCGTT
AGCAGTCAACGCGTGAATGTCTTTTTCCAACGGCTCTTCCTGGGACCGTT
GAATTTCAAATTTCAGAGCGAAAATTACCTGGACACCACGTACCTGGATA
AGGACATGCGCATTTCCAGGTCAGGCTTCATTTTTTACCGTCCCCTTCTC
CGTTCCTCATCCTGTTGTGTCCTTTGCTTTTGACGTTTTGTCCGATGATT
CCGAAGCTCCCTGTCCACCAATGTTTCGCGGCAGTCTTGGCGCGTCGACC
GTACACGTAGAGCGCTAAAGGAGGCTGACTTTGTACCTCATGCGTGTGTG
CCTGGACGAGAGACGGGACTCGGATTGCCCCGATTGCCTAGCTGGGTGTA
CCGAGCCCTCTGGTGTCAACCCTCACATGTCTACTGATATTCATCCTTGT
TCTGACATATCTCAATAGGGGGGGGCGTGGCAATGTCTTTGTTCTGATCC
GTGATGATCCGCCTGTGGGCAATTGAGTAGTTGGTACCATGCGCTCGCCT
GCAGAGCAGGAGGCTCAAGTGGAAATGAAGGAAATTGGAAAAAACGGTGA
CAGTGC back to topCoding sequence (CDS) from alignment at CM002462.1:145154..147409- >rna3824 ID=rna3824|Name=rna3824|organism=Nannochloropsis gaditana|type=CDS|length=2712bp|location=Sequence derived from alignment at CM002462.1:145154..147409- (Nannochloropsis gaditana)
GAACGAGGAACAGATACGCCCGATTCCCTTCCTTCCCGCCATCGAAGAGG
CCATCGATGCCACCATCGAGCCCGTTAGCAGTCAACGCGTGAATGTCTTT
TTCCAACGGCTCTTCCTGGGACCGTTGAATTTCAAATTTCAGAGCGAAAA
TTACCTGGACACCACGTACCTGGATAAGGACATGCGCATTTCCAGGTCAG
GCTTCATTTTTTACCGTCCCCTTCTCCGTTCCTCATCCTGTTGTGTCCTT
TGCTTTTGATCCCACTTCCTCGGCCCTCATCACCGCCCGCTGGCGCCTGG
TCTTTACCACCAGCGAGTCCATCCTAGGCAAAACCCGCCCCGCAGTCTTC
CGTCCCGTGGGCCCGATCTATCAATACATTAACCTGGCCCGAGGCACAGC
CAGATCAAAACCGAGCTGCTCCGGAAAGCCGAAGAAGTCTCCCGGGGCCT
GGAAGCAAGTCAGGAGCAACAAGAATCGATCCTGGCGCTTATCAAAAGCC
TCGAGAAGAAGAACCCTACGAAATCATGTCAGTTTTAGTCGCCCGCCGTC
AATTATTCCTCCTTGTCCTCCTATTGATCTTCCTGCTGCTCACTCCTGTG
GTGACCCACGGCTTTAATTTCTTCCCGACACGATCATCCGCCGGCACCGC
GGTTAAAGCAGGAGGTCCTGTGTCAAAGGAACGAGGAACAGATACGCCCG
ATTCCCTTCCTTCCCGCCATCGAAGAGGCCATCGATGCCACCATCGAGCC
CGTTAGCAGTCAACGCGTGAATGTCTTTTTCCAACGGCTCTTCCTGGGAC
CGTTGAATTTCAAATTTCAGAGCGAAAATTACCTGGACACCACGTACCTG
GATAAGGACATGCGCATTTCCAGGTCAGGCTTCATTTTTTACCGTCCCCT
TCTCCGTTCCTCATCCTGTTGTGTCCTTTGCTTTTGATCCCACTTCCTCG
GCCCTCATCACCGCCCGCTGGCGCCTGGTCTTTACCACCAGCGAGTCCAT
CCTAGGCAAAACCCGCCCCGCAGTCTTCCGTCCCGTGGGCCCGATCTATC
AATACATTAACCTGGCCCGAGGCACAGCCAGATCAAAACCGAGCTGCTCC
GGAAAGCCGAAGAAGTCTCCCGGGGCCTGGAAGCAAGTCAGGAGCAACAA
GAATCGATCCTGGCGCTTATCAAAAGCCTCGAGAAGAAGAACCCTACGAA
ATCATGTCAGTTTTAGTCGCCCGCCGTCAATTATTCCTCCTTGTCCTCCT
ATTGATCTTCCTGCTGCTCACTCCTGTGGTGACCCACGGCTTTAATTTCT
TCCCGACACGATCATCCGCCGGCACCGCGGTTAAAGCAGGAGGTCCTGTG
TCAAAGGAACGAGGAACAGATACGCCCGATTCCCTTCCTTCCCGCCATCG
AAGAGGCCATCGATGCCACCATCGAGCCCGTTAGCAGTCAACGCGTGAAT
GTCTTTTTCCAACGGCTCTTCCTGGGACCGTTGAATTTCAAATTTCAGAG
CGAAAATTACCTGGACACCACGTACCTGGATAAGGACATGCGCATTTCCA
GGTCAGGCTTCATTTTTTACCGTCCCCTTCTCCGTTCCTCATCCTGTTGT
GTCCTTTGCTTTTGATCCCACTTCCTCGGCCCTCATCACCGCCCGCTGGC
GCCTGGTCTTTACCACCAGCGAGTCCATCCTAGGCAAAACCCGCCCCGCA
GTCTTCCGTCCCGTGGGCCCGATCTATCAATACATTAACCTGGCCCGAGG
CACAGCCAGATCAAAACCGAGCTGCTCCGGAAAGCCGAAGAAGTCTCCCG
GGGCCTGGAAGCAAGTCAGGAGCAACAAGAATCGATCCTGGCGCTTATCA
AAAGCCTCGAGAAGAAGAACCCTACGAAATCATGTCAGTTTTAGTCGCCC
GCCGTCAATTATTCCTCCTTGTCCTCCTATTGATCTTCCTGCTGCTCACT
CCTGTGGTGACCCACGGCTTTAATTTCTTCCCGACACGATCATCCGCCGG
CACCGCGGTTAAAGCAGGAGGTCCTGTGTCAAAGGAACGAGGAACAGATA
CGCCCGATTCCCTTCCTTCCCGCCATCGAAGAGGCCATCGATGCCACCAT
CGAGCCCGTTAGCAGTCAACGCGTGAATGTCTTTTTCCAACGGCTCTTCC
TGGGACCGTTGAATTTCAAATTTCAGAGCGAAAATTACCTGGACACCACG
TACCTGGATAAGGACATGCGCATTTCCAGGTCAGGCTTCATTTTTTACCG
TCCCCTTCTCCGTTCCTCATCCTGTTGTGTCCTTTGCTTTTGATCCCACT
TCCTCGGCCCTCATCACCGCCCGCTGGCGCCTGGTCTTTACCACCAGCGA
GTCCATCCTAGGCAAAACCCGCCCCGCAGTCTTCCGTCCCGTGGGCCCGA
TCTATCAATACATTAACCTGGCCCGAGGCACAGCCAGATCAAAACCGAGC
TGCTCCGGAAAGCCGAAGAAGTCTCCCGGGGCCTGGAAGCAAGTCAGGAG
CAACAAGAATCGATCCTGGCGCTTATCAAAAGCCTCGAGAAGAAGAACCC
TACGAAATCATGTCAGTTTTAGTCGCCCGCCGTCAATTATTCCTCCTTGT
CCTCCTATTGATCTTCCTGCTGCTCACTCCTGTGGTGACCCACGGCTTTA
ATTTCTTCCCGACACGATCATCCGCCGGCACCGCGGTTAAAGCAGGAGGT
CCTGTGTCAAAG back to top
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