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Properties
| Property Name | Value |
|---|
| Product | glutamate synthase |
| Orig transcript id | gnl|cribi|Naga_101084g1.8480.mrna |
| Orig protein id | gnl|cribi|Naga_101084g1.8480 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:118808..120288 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3813 ID=rna3813|Name=rna3813|organism=Nannochloropsis gaditana|type=mRNA|length=516bp
TGTAGGGCTCTCAGGCTAAAACTACGCGTATGTTCACCCACATTTCTCAA
TCCCCCTATTCGCCAATGGACAGGTGGGAAGCATGCTCCGGCTCCTGTCT
GCGGGCCGCACGGGCTCTCTGGTGTCATCGGTGTCATCAGGCGCGCGCCT
TCAGGCCTCTGCCGCCATCCTGGCCCGGCCTCGTCCGGGATATGGCATCA
GCAATAAATCACTGGGAAATACTCGTCTCATCACGGCTTTCCCGGAAACA
CAAGGGCTGTACAACAAGGCCAATGAACGCGACTCCTGCGGGGTAGGGCT
GGTCGCGCATTTGAAGAAGAAAGCGTCCCGACAGATCGTGGTGGATGCAA
ACGAGATGCTAGTGCGCATGTCGCACCGTGGAGGCTGTGGGTGCGAGCCC
AACACAGGTGACGGCGCGGGCATGTTGGTGGGCCTGCCCGACCATTTCCT
CCGCAAGGTCGTCAAGAACGAGCTGGGCAAATCCCTGCCCCCTCTCGGGA
AATACGCGGTGGGGAA back to topprotein sequence of rna3813 >rna3813-protein ID=rna3813-protein|Name=rna3813|organism=Nannochloropsis gaditana|type=polypeptide|length=193bp
MPRTPVFPRICFLRPACSPLGCGSIPRPRLRLLHVKTRRQAFSLRGKRKH
LEMLSASRNHLTRCLRTAVAARQVSVRQFHPSASRLGGSITRHEVWRDDN
EQDNLPKVKRRDGSIAAIEKKRGFVDYHRNPDPYRDPLDRVFDWGEIKTD
EGHDEVERKVQAARCMDCGTPFCQTHTGCPGGDRPAAQDQQLP back to topmRNA from alignment at CM002462.1:118808..120288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3813 ID=rna3813|Name=rna3813|organism=Nannochloropsis gaditana|type=mRNA|length=1481bp|location=Sequence derived from alignment at CM002462.1:118808..120288+ (Nannochloropsis gaditana)
ATGCCTCGGACACCGGTTTTCCCACGTATATGTTTTCTTAGACCGGCTTG
TTCCCCACTGGGCTGCGGTTCcatccctcgtcctcgcctccgaCTTCTCC
ACGTCAAGACGCGCAGGCAAGCTTTCAGCCTGAGAGGAAAACGCAAGCAT
TTAGAGATGTTATCAGCATCCAGAAATCATTTAACAAGGTGCCTTAGGAC
TGCAGTGGCCGCGCGCCAAGTCAGTGTCCGTCAGTTCCAGTAAGTGTTGA
GGaaacgaaggggaggacaggaatcagggaggaaaagaagactGAATACA
TGTGCATCCCAATGCACGGCAAGAGGATTAAATTGACCACGACCTCCGCA
TTTTACAGCCCCTCAGCTTCTCGCCTCGGCGGCAGCATTACCAGGCATGA
GGTCTGGCGTGACGACAACGAGCAGGACAACCTCCCCAAGgtactttttt
ttttccttccttcccttccccttgccctttGCGTTCAGACCTCGCCCCCC
GTCTCCCATCGGACGCTGTTTCCATGGACGTGCGACTTGTGagagaggac
atggagagcgATGTGGCGCTTTGAAGAATTGTGGTTCTGAGGGTGGAGAC
TCGCAccctcatttcccctccttccccttccccttcttctccctcccttc
cctccgcctcattTCCGCGATGCCCTCGACCCGGCAGGTGAAAAGACGCG
ACGGCTCAATCGCGGCCATTGAGAAGAAGCGTGGTTTTGTTGACTACCAT
CGGAATCCGGACCCTTATCGGGACCCGCTAGACCGAGTCTTCGACtgggg
tgagggagggcgggcgggagggcgtgcgggagggcgagcgggaAGAGAAG
TAGCTTACTGGGCATCGTGCACGAGACTGTGGTTATAGTAACGTGATAAG
TGTCCTGATCgtggcccttcctccccgccgttctccctcccttcctttct
ttctcctccctccctctctcctccctcctcccttcctccgccctccctcc
ctctaggCGAGATCAAAACGGACGAGGGGCACGACGAGGTGGAGCGCAAG
GTTCAAGCCGCCCGATGCATGGACTGTGGCACTCCTTTCTGCCAGACGCA
CACCGGGTaggacggcgggagggacggcgggaaggagggcgggagggagg
aaaggaaatttGCGGCAGGCACGGCCGGTGACAATTTTTAATCTTCTTCC
TGCGCGTGGTGCTCTGTTCCAAATCCtcggcgcccctccctccctccctc
cctccctcccttcctcccgcacgaaCTGAACCAAACCGAGTTGCCCTGTC
ACCCTCGGCCTCACCTTGTTCCCCGTCTCCTtttatccctccttcctcct
tccctccctccctccctccctccctgcaggtGCCCCGTGAACAACTTGAT
TCCCGAGTGGAACGAGCTCGTGTATAAGGGccagtggagggaggcgatcg
ACCGGCTGCACAAGACCAACAACTTCCCTGA back to topCoding sequence (CDS) from alignment at CM002462.1:118808..120288+ >rna3813 ID=rna3813|Name=rna3813|organism=Nannochloropsis gaditana|type=CDS|length=3492bp|location=Sequence derived from alignment at CM002462.1:118808..120288+ (Nannochloropsis gaditana)
ATGCCTCGGACACCGGTTTTCCCACGTATATGTTTTCTTAGACCGGCTTG
TTCCCCACTGGGCTGCGGTTCcatccctcgtcctcgcctccgaCTTCTCC
ACGTCAAGACGCGCAGGCAAGCTTTCAGCCTGAGAGGAAAACGCAAGCAT
TTAGAGATGTTATCAGCATCCAGAAATCATTTAACAAGGTGCCTTAGGAC
TGCAGTGGCCGCGCGCCAAGTCAGTGTCCGTCAGTTCCACCCCTCAGCTT
CTCGCCTCGGCGGCAGCATTACCAGGCATGAGGTCTGGCGTGACGACAAC
GAGCAGGACAACCTCCCCAAGGTGAAAAGACGCGACGGCTCAATCGCGGC
CATTGAGAAGAAGCGTGGTTTTGTTGACTACCATCGGAATCCGGACCCTT
ATCGGGACCCGCTAGACCGAGTCTTCGACtggggCGAGATCAAAACGGAC
GAGGGGCACGACGAGGTGGAGCGCAAGGTTCAAGCCGCCCGATGCATGGA
CTGTGGCACTCCTTTCTGCCAGACGCACACCGGgtGCCCCggaggcgatc
gACCGGCTGCACAAGACCAACAACTTCCCTGAATGCCTCGGACACCGGTT
TTCCCACGTATATGTTTTCTTAGACCGGCTTGTTCCCCACTGGGCTGCGG
TTCcatccctcgtcctcgcctccgaCTTCTCCACGTCAAGACGCGCAGGC
AAGCTTTCAGCCTGAGAGGAAAACGCAAGCATTTAGAGATGTTATCAGCA
TCCAGAAATCATTTAACAAGGTGCCTTAGGACTGCAGTGGCCGCGCGCCA
AGTCAGTGTCCGTCAGTTCCACCCCTCAGCTTCTCGCCTCGGCGGCAGCA
TTACCAGGCATGAGGTCTGGCGTGACGACAACGAGCAGGACAACCTCCCC
AAGGTGAAAAGACGCGACGGCTCAATCGCGGCCATTGAGAAGAAGCGTGG
TTTTGTTGACTACCATCGGAATCCGGACCCTTATCGGGACCCGCTAGACC
GAGTCTTCGACtggggCGAGATCAAAACGGACGAGGGGCACGACGAGGTG
GAGCGCAAGGTTCAAGCCGCCCGATGCATGGACTGTGGCACTCCTTTCTG
CCAGACGCACACCGGgtGCCCCggaggcgatcgACCGGCTGCACAAGACC
AACAACTTCCCTGAATGCCTCGGACACCGGTTTTCCCACGTATATGTTTT
CTTAGACCGGCTTGTTCCCCACTGGGCTGCGGTTCcatccctcgtcctcg
cctccgaCTTCTCCACGTCAAGACGCGCAGGCAAGCTTTCAGCCTGAGAG
GAAAACGCAAGCATTTAGAGATGTTATCAGCATCCAGAAATCATTTAACA
AGGTGCCTTAGGACTGCAGTGGCCGCGCGCCAAGTCAGTGTCCGTCAGTT
CCACCCCTCAGCTTCTCGCCTCGGCGGCAGCATTACCAGGCATGAGGTCT
GGCGTGACGACAACGAGCAGGACAACCTCCCCAAGGTGAAAAGACGCGAC
GGCTCAATCGCGGCCATTGAGAAGAAGCGTGGTTTTGTTGACTACCATCG
GAATCCGGACCCTTATCGGGACCCGCTAGACCGAGTCTTCGACtggggCG
AGATCAAAACGGACGAGGGGCACGACGAGGTGGAGCGCAAGGTTCAAGCC
GCCCGATGCATGGACTGTGGCACTCCTTTCTGCCAGACGCACACCGGgtG
CCCCggaggcgatcgACCGGCTGCACAAGACCAACAACTTCCCTGAATGC
CTCGGACACCGGTTTTCCCACGTATATGTTTTCTTAGACCGGCTTGTTCC
CCACTGGGCTGCGGTTCcatccctcgtcctcgcctccgaCTTCTCCACGT
CAAGACGCGCAGGCAAGCTTTCAGCCTGAGAGGAAAACGCAAGCATTTAG
AGATGTTATCAGCATCCAGAAATCATTTAACAAGGTGCCTTAGGACTGCA
GTGGCCGCGCGCCAAGTCAGTGTCCGTCAGTTCCACCCCTCAGCTTCTCG
CCTCGGCGGCAGCATTACCAGGCATGAGGTCTGGCGTGACGACAACGAGC
AGGACAACCTCCCCAAGGTGAAAAGACGCGACGGCTCAATCGCGGCCATT
GAGAAGAAGCGTGGTTTTGTTGACTACCATCGGAATCCGGACCCTTATCG
GGACCCGCTAGACCGAGTCTTCGACtggggCGAGATCAAAACGGACGAGG
GGCACGACGAGGTGGAGCGCAAGGTTCAAGCCGCCCGATGCATGGACTGT
GGCACTCCTTTCTGCCAGACGCACACCGGgtGCCCCggaggcgatcgACC
GGCTGCACAAGACCAACAACTTCCCTGAATGCCTCGGACACCGGTTTTCC
CACGTATATGTTTTCTTAGACCGGCTTGTTCCCCACTGGGCTGCGGTTCc
atccctcgtcctcgcctccgaCTTCTCCACGTCAAGACGCGCAGGCAAGC
TTTCAGCCTGAGAGGAAAACGCAAGCATTTAGAGATGTTATCAGCATCCA
GAAATCATTTAACAAGGTGCCTTAGGACTGCAGTGGCCGCGCGCCAAGTC
AGTGTCCGTCAGTTCCACCCCTCAGCTTCTCGCCTCGGCGGCAGCATTAC
CAGGCATGAGGTCTGGCGTGACGACAACGAGCAGGACAACCTCCCCAAGG
TGAAAAGACGCGACGGCTCAATCGCGGCCATTGAGAAGAAGCGTGGTTTT
GTTGACTACCATCGGAATCCGGACCCTTATCGGGACCCGCTAGACCGAGT
CTTCGACtggggCGAGATCAAAACGGACGAGGGGCACGACGAGGTGGAGC
GCAAGGTTCAAGCCGCCCGATGCATGGACTGTGGCACTCCTTTCTGCCAG
ACGCACACCGGgtGCCCCggaggcgatcgACCGGCTGCACAAGACCAACA
ACTTCCCTGAATGCCTCGGACACCGGTTTTCCCACGTATATGTTTTCTTA
GACCGGCTTGTTCCCCACTGGGCTGCGGTTCcatccctcgtcctcgcctc
cgaCTTCTCCACGTCAAGACGCGCAGGCAAGCTTTCAGCCTGAGAGGAAA
ACGCAAGCATTTAGAGATGTTATCAGCATCCAGAAATCATTTAACAAGGT
GCCTTAGGACTGCAGTGGCCGCGCGCCAAGTCAGTGTCCGTCAGTTCCAC
CCCTCAGCTTCTCGCCTCGGCGGCAGCATTACCAGGCATGAGGTCTGGCG
TGACGACAACGAGCAGGACAACCTCCCCAAGGTGAAAAGACGCGACGGCT
CAATCGCGGCCATTGAGAAGAAGCGTGGTTTTGTTGACTACCATCGGAAT
CCGGACCCTTATCGGGACCCGCTAGACCGAGTCTTCGACtggggCGAGAT
CAAAACGGACGAGGGGCACGACGAGGTGGAGCGCAAGGTTCAAGCCGCCC
GATGCATGGACTGTGGCACTCCTTTCTGCCAGACGCACACCGGgtGCCCC
ggaggcgatcgACCGGCTGCACAAGACCAACAACTTCCCTGA back to top
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