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Properties
| Property Name | Value |
|---|
| Product | glutamate synthase |
| Orig transcript id | gnl|cribi|Naga_101061g3.7802.mrna |
| Orig protein id | gnl|cribi|Naga_101061g3.7802 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:113699..114912 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3810 ID=rna3810|Name=rna3810|organism=Nannochloropsis gaditana|type=mRNA|length=2090bp
GAGGGGGCAGGGGAGGGCGGGGCAGGGAGGCTCGGATCGCTTTCTACGAG
CAAAGGGAGGCGGACCTCGGCGTTGGGACTGTCGCATTCCTCCCTCCAGC
CCTCTTTCGCTACCTCGCCCTCTTTGGAGGCGTCTGCAGAGGTGGTGGGG
GCGGGGGGCGGGTGGGAGGAAGGAGAGTACAACGACCTGGACGTCTCGGT
GGACCTTGTAGACGAGGAGCAGCCCCTCTTGAGTCGAGGAGACCGGCTGC
AGCGCCGGCGCGCCGAGGTCGAGAAATTGGTGCAGCGATGCCAGGGTTAC
CGCGTCCTTCTCCAAGAGGGCGTGGGGGTGGAAGTCATGGAGGTCCTCCT
CCCTCCTTCCCCTGCTCCTCCTTCCTCCCCCTCCCACCCCTTCCCTCCCT
CCCTCCCTCCTTCCTGCACGTTCCACCCGGTAAAGATGCGGGTGGAAGGC
CTCCTGTCCCCTTCCCGCCTGTCCGACCCCGATCCTACGTCCCCCCTCGC
CCTCCCCATCGGCAACGAGGACCTGGTCAAGGCGCGCTTGGTGTGGGAGG
ACGACAAACACCACCCGAGCAAACGTGGGAGTTTCTTCCAAAGCCTCGGG
TGGGGTCGGACGCGGCGCATGAGCAGTTTGGGAACCACCACGGCATCTCT
GGGACCAGGGGCACAGGCGGTGCCCGATGCCATCCATTTGACTGAGTTGT
ACGGCGTGGTGCGGGGCTTGCGCCGTATCCGTCCCAAGGCAGTGTACTTG
GCGGCGGCGGCGGCTGTGATGGCGGCCGCGGAGGGGGAGGCAGGGGGGCG
AGGGAGGGATGGAACACAGCCGACTCTTAACCCTGACAACCCTCCAACTT
CCGCAAAAACCACGACGCGGGTTGGTCTTGCGCTTTCCTCGGCGGGAAGA
TCGGAACGCGTTTTTGGACGGCCTGCGCAAGTGCCTGGGAGACCTCTTAC
AGGTCGATTTGTCTCCGGCCACCTTGGAGGGGTTGGGGGAGGGAGGGGGG
GAGGGACGGGGGGAGGTCTCCGTTTGGGCGAAGTTGCTGCGGGAGCGGGC
CAAGGCGAGGCCGGCGTTTGTCCGGGAGGGGGAGGAAGGGGCAGAAGGCG
GGAAGGAGGGAGAGGACGGGGCGCTCTACGTGTCCCTGGCCGATGCCCAA
GCCGTGCTTGGCGCGGAGAGGAGGGAAATCAAACGGACGTTTGGGCTCTT
GCTGGACACGGAATTCGACGTGAACGGACTCGAGGACGAGAACAGAGGGC
TGCGGGCGGAGGTGACGAGGCTGGCGTTGACTTTGAAAGGGAAAGACACG
GAGTTGGAGAGGGCGCACCATGAGCAAAAAGAACGTATCGCCCTGCTGAG
AAAGGTGGAAGGCTTGGAGCTACGGAATGCGGATTTGGAGCAAATCATGC
GCAAGACGGACGAGGCGCAGGAAGCACAACACCGGGAAGAACGCAGCTTT
TTGACTCAACAGCTGGATGGACAGGTGAAAGCAAACAAGGAGCTGGTGGA
AAAATCCGTGTCCCTGCAAAAGGAGAACCATAAGCTCAAGGAAGACGTGC
GCCGCCTCTCGGATATGATCCGGGAACGAGAAGAGGAATACAACCAGATC
TTGGCGCGTGCAGAATTCGACCGTGCTCTCTCTCCCCCTCTTTCCTCCTC
CTCCACCTATGCCTTGACGGCCCTCCCTCCCATCCCCTCCTCCAGCCCTC
CTCTGCCGCCCGTCGTTGCTTCGCCCGAGAAAAGGAGGCAGGGTTAAGGA
ATGGAGGAGAGACCGAGCCAGTGGGAAGAACGGCTGGAGTGAGGAACGGC
GATATTGGATCTTGGGAAATCCTTCCAGGATGTCAGGCTTCGTCAGAAAT
TTTGCCTAGAAAAAAAACGAGCAGCTTGAAAGTAAACGGATTGAAACTGG
GAGGGATACGACCAGCGTAGCGTGTGTACATATACCACAGATGATGCTCA
GTGCGTCGAGGCATAGATCAAGGGAAACGGGCATTGTTGGAAGAAAATGC
AACGCTTTTTCGTAGAAACTTAATGGCGGGACAAAGACATAAAGGAGGCT
TTTCGCAAAGATTGAATGTATGCTCTTATCCCTCTAAGGC back to topprotein sequence of rna3810 >rna3810-protein ID=rna3810-protein|Name=rna3810|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
LPAGGRVVVLGETGRNFAAGMSGGIAYILDPERAFPDRCNKGLVALETVE
TEEEAALLKSYIQEHVQMTGSEVGKKVLAEWPAPIHQFVKVMPIDYKRVL
RQLAEEGEEENSGDEAQVAISY back to topmRNA from alignment at CM002462.1:113699..114912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3810 ID=rna3810|Name=rna3810|organism=Nannochloropsis gaditana|type=mRNA|length=1214bp|location=Sequence derived from alignment at CM002462.1:113699..114912- (Nannochloropsis gaditana)
CTTCCTGCAGGCGGTCGCGTCGTCGTCCTGGGCGAAACGGGAAGGAATTT
CGCGGCAGGGATGAGTGGTGGCATTGCTTACATTCTTGACCCAGAGCGGG
CCTTCCCAGACCGGTGCAACAAGGGATTGGTTGCTTTGGAGACGGTCGAG
ACAGAGGAAGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGGAAGGAGTGTGGACACACGAAGCATGTGTTTGTGGAATGGTG
ATACTTGTGCGACTTTCTCCCCTCGTCTTGACATGTTCCTCTTCCTTCCT
TCCCTCCCTCCCTCCCTCCCTTTCTCCTTCCTTCCCTCAGGCGGCCCTCC
TGAAATCCTACATCCAGGAACACGTGCAAATGACAGGATCGGAAGTGGGC
AAAAAAGTTTTGGCGGAATGGCCCGCCCCTATCCATCAATTCGTCAAGGT
CATGCCCATCGACTACAAGCGTGTCCTCCGGCAGTTGGCTGAGGAAGGCG
AGGAGGAAAATAGTGGGGACGAGGCACAGGTGGCCATCTCCTACTGAGGG
GCGGGAGAAGGAATGGAAGAGGACGGGAGGGAGAGGGAGGAGGAAGACGG
TACATGCGGGGGATGATTTATGGGAGAGAGCGGTGGAATTTATGACGTTG
ATAATGAGAAGGTACGAAACGGATACACAGGACTTGATAGGAAGAAAGGA
TAATTACTGAAATGTTGCGAGGATCGACAGGATTTAAATGGAGCGCCAAT
AATTCGGGGATGGTGATGCTCTCTGTGGTTGATCTCTTCCTCTGTGCGCG
TAGGCTGAGTCTTGCCTTGAGAGGTCATGACGGAATGGGGAAATGTGGTG
GTGCGTGGCACGGAAAGCCGTCGATCGTCTGATTCGTGTTGCGTGGCCTC
CATTTCGACGCTGAAGAAGAGGGAAGCAGAAAGGAAGGGCGGGAGGTGAG
AGAGGAAACTTAGTAGAGCGATGCATGGTTGTACATAATCACTAGGAGAG
GGTACGAAGCAGCTGTTGGATATTATAGAGAGGCGTGATAAAAGAAAACC
AGAGAATGACTAGATGCAAGTCCGGGGGAGGCAGCCGAGGCCATCCTCGC
TCTTCCGCGTTGCGGCCGTTGGGCCTTAGAGGGATAAGAGCATACATTCA
ATCTTTGCGAAAAGCCTCCTTTATGTCTTTGTCCCGCCATTAAGTTTCTA
CGAAAAAGCGTTGC back to topCoding sequence (CDS) from alignment at CM002462.1:113699..114912- >rna3810 ID=rna3810|Name=rna3810|organism=Nannochloropsis gaditana|type=CDS|length=738bp|location=Sequence derived from alignment at CM002462.1:113699..114912- (Nannochloropsis gaditana)
GCGGCCCTCCTGAAATCCTACATCCAGGAACACGTGCAAATGACAGGATC
GGAAGTGGGCAAAAAAGTTTTGGCGGAATGGCCCGCCCCTATCCATCAAT
TCGTCAAGGTCATGCCCATCGACTACAAGCGTGTCCTCCGGCAGTTGGCT
GAGGAAGGCGAGGAGGAAAATAGTGGGGACGAGGCACAGGTGGCCATCTC
CTACTGACTTCCTGCAGGCGGTCGCGTCGTCGTCCTGGGCGAAACGGGAA
GGAATTTCGCGGCAGGGATGAGTGGTGGCATTGCTTACATTCTTGACCCA
GAGCGGGCCTTCCCAGACCGGTGCAACAAGGGATTGGTTGCTTTGGAGAC
GGTCGAGACAGAGGAAGAGGCGGCCCTCCTGAAATCCTACATCCAGGAAC
ACGTGCAAATGACAGGATCGGAAGTGGGCAAAAAAGTTTTGGCGGAATGG
CCCGCCCCTATCCATCAATTCGTCAAGGTCATGCCCATCGACTACAAGCG
TGTCCTCCGGCAGTTGGCTGAGGAAGGCGAGGAGGAAAATAGTGGGGACG
AGGCACAGGTGGCCATCTCCTACTGACTTCCTGCAGGCGGTCGCGTCGTC
GTCCTGGGCGAAACGGGAAGGAATTTCGCGGCAGGGATGAGTGGTGGCAT
TGCTTACATTCTTGACCCAGAGCGGGCCTTCCCAGACCGGTGCAACAAGG
GATTGGTTGCTTTGGAGACGGTCGAGACAGAGGAAGAG back to top
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