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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100576g4.2313.mrna |
| Orig protein id | gnl|cribi|Naga_100576g4.2313 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:95320..97125 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3804 ID=rna3804|Name=rna3804|organism=Nannochloropsis gaditana|type=mRNA|length=512bp
GACACAGACAGGTGAGGAAACGTGGACGTCTATAGGATGAGGTCCGGGGA
CGGTAATGGCACCGCGCTGCTTTCCCGTCGAACCCTGCCAGCAAGTCGAG
GAAGCATGAGGGATGAGAAAGGTCCGGGGGCAGAGGAGATGGCTTCGACA
GAACAAGCCCGACAAGCGGTGCTGGCGACCATTGAAGAAAAGATGCGAAA
GGAAGGAAAGCCGGAAGATTCTCGCATGAATTATGCCTCGATGTCCGGGG
GAGGAGTGAGTGGTGACATGCCCTATTATATTCATCCTTGGAAAGACCCT
GCTTTTGGCCCTCCGGTTGAATATCAGTCCCTCCGTCCGTTCCCCCCCGC
TATCCTCCGTACCTACTCCCTCCTCCAAGCCATGTCCTTCCAAGGCTTGT
GGACCGAAATCCACCGGGCTTGGATCACGGTCGACAACCTCCTCTACATT
TGGGACTACCACACGGAAGGTAAGGTCTAACCCTAACCCTACGGTCTTGG
GGGGGGGGATGG back to topprotein sequence of rna3804 >rna3804-protein ID=rna3804-protein|Name=rna3804|organism=Nannochloropsis gaditana|type=polypeptide|length=278bp
MCETEEGRGMQSRIQLYWRSIIFNEIPSRAQSPELQAWLERQARDTLSRW
WSPGRGGRGVGVGKPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKST
SANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQ
VQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLD
ALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTH
AAELEAKPIVEELCRLRERFQFYPEHMD back to topmRNA from alignment at CM002462.1:95320..97125+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3804 ID=rna3804|Name=rna3804|organism=Nannochloropsis gaditana|type=mRNA|length=1806bp|location=Sequence derived from alignment at CM002462.1:95320..97125+ (Nannochloropsis gaditana)
ttcccatccagGTGGCCAACACCTACACTTTGTGGGAGGAGTGTTTGCTG
TTGATTGCCATGtgcgagacggaggagggacgcgggaTGCAAAGCCGGAT
CCAGCTCTATTGGCGATCCATTATCTTTAACGAGATCCCCTCTCGCGCCC
AGTCTCCGGAGCTTCAGGTGTGTGagccccacccttcctccctctttcct
ccccctctccctcgctctgccccccggcctccgcggccTTTTTCGGCAAT
TTTACATTCCCGGTCGGAGAACCCCCACGATTTCTTTTCTGTCGTGCTCC
CTCTTTGCCAGGCGTGGCTCGAGCGACAAGCGCGCGACACCCTCTCCCGA
TGGTGGTccccagggaggggggggcggggggtgggggtagGCAAGCCGGA
CGGGGACCTTGACGCCTCGGACGATAAGGTAGGTGCTCGTCTCAAGCGAT
GCTTGGGCGTAGGAGGCTGTGAGACAGAAAACTTCGGGCGTGCAATGCTG
TGAGACAGAAAAGGCGTGGCTGCCGCTCTTTTTGATCCCATGTCCCCAAC
GTTCGTGttatcctccttcccacagccGCTTCGTACGCTGTTCGAGCGGA
TCCAGCATCTCTCCCGTTCCATGCGCCTGCAAGACGGTGGGAAAAGGTAA
CGCTTGTCTAATGTTTTCTCATCCTCGCGTTGTGCGCACGCCTTCTGCTC
AATCTCGTCCACCGCGTGGGGTTAGGGTGAGGGTTAATTCCTACTGATTG
CCACCACTTTTCGCGTAGCAGAAGCACCCCTATCGTTTTTTCCCCTATCT
TTACAtcacgcccctctccctattcacacgcctccctcccacgacaaATG
CAGCACCAGCGCAAACAGCGCCTTCCCGCTCCGATACTTGGTTGAGGTCC
TGTTGGAAGTCGAGGCAGAGGTCGACGCCGCTCTGGGTcgcgttccctcc
ttccctccctcccccggcccctgcttcccccacCGCACATGGCGGGCCCT
GCGGCAGGTGCAATGGGCCTTCATCGACTTGTTCTTGGAGCACGTGAGCG
TCTACCGGGAGTCAAGGATGAAGGCGCCAGAGGTCTCGCAACCCGGGAGA
ACCTACCCGCCTGCCTTCCATCGGCCCATGTCCTGGTCCCGGGTGCATGT
GTTGGACGCCCTGTGTGACCTGACCACCCAGTGGTACGCGGCCTTGAAAG
AGGCGCCGACCGTGGGCGGACtcgggcaaggagaaggcgtgATGATCGAT
ACCCGGCAACAGTCCATGGTGGTCCGAGAACTCTCGCGCCTGGCCAACAC
CACGCATGCCGCAGAGTTAgaggtgagggggggagaggaaggaatgcTGG
CGATACACTGTCCTACCTGCATTCTCAAACGGAGGGGCATGTCAAGCACT
GCACGGCTGCTTTTGTTTTGCATTTTTGCCACTTGCTGAATCGAGAGGTG
ACGCGATGTGCTTATGCAGATTCCAACGTCATCATATCACAGGCCAAGCC
CATTGTGGAGGAGCTCTGCAGGTTGCGGGAGCGCTTTCAATTTTATCCTG
AACACATGGATTAAAGGGAGCAATTGACTCTCTGCGAGAAGGTGAATGGT
TTGAGGCTATTTAGTGTGGGAATAGTGGGCCGCAATAGCACAAAataaag
aaagagaggaaggaggagagatgcCAACGAAAGTCTGAATTGCCCGCATT
GAAACAAAGAACGGAACATCATGTAACCGATACTGATGGTCTGAGAAGAT
ATTGTTTGCCTCCCTGGCCTGTATTTTTTTTGTGAAAGGTATCTGCAGCC
AACTGT back to topCoding sequence (CDS) from alignment at CM002462.1:95320..97125+ >rna3804 ID=rna3804|Name=rna3804|organism=Nannochloropsis gaditana|type=CDS|length=4185bp|location=Sequence derived from alignment at CM002462.1:95320..97125+ (Nannochloropsis gaditana)
ATGtgcgagacggaggagggacgcgggaTGCAAAGCCGGATCCAGCTCTA
TTGGCGATCCATTATCTTTAACGAGATCCCCTCTCGCGCCCAGTCTCCGG
AGCTTCAGGCGTGGCTCGAGCGACAAGCGCGCGACACCCTCTCCCGATGG
TGGTccccagggaggggggggcggggggtgggggtagGCAAGCCGGACGG
GGACCTTGACGCCTCGGACGATAAGccGCTTCGTACGCTGTTCGAGCGGA
TCCAGCATCTCTCCCGTTCCATGCGCCTGCAAGACGGTGGGAAAAGCACC
AGCGCAAACAGCGCCTTCCCGCTCCGATACTTGGTTGAGGTCCTGTTGGA
AGTCGAGGCAGAGGTCGACGCCGCTCTGGGTcgcgttccctccttccctc
cctcccccggcccctgcttcccccacCGCACATGGCGGGCCCTGCGGCAG
GTGCAATGGGCCTTCATCGACTTGTTCTTGGAGCACGTGAGCGTCTACCG
GGAGTCAAGGATGAAGGCGCCAGAGGTCTCGCAACCCGGGAGAACCTACC
CGCCTGCCTTCCATCGGCCCATGTCCTGGTCCCGGGTGCATGTGTTGGAC
GCCCTGTGTGACCTGACCACCCAGTGGTACGCGGCCTTGAAAGAGGCGCC
GACCGTGGGCGGACtcgggcaaggagaaggcgtgATGATCGATACCCGGC
AACAGTCCATGGTGGTCCGAGAACTCTCGCGCCTGGCCAACACCACGCAT
GCCGCAGAGTTAgagGCCAAGCCCATTGTGGAGGAGCTCTGCAGGTTGCG
GGAGCGCTTTCAATTTTATCCTGAACACATGGATTAAATGtgcgagacgg
aggagggacgcgggaTGCAAAGCCGGATCCAGCTCTATTGGCGATCCATT
ATCTTTAACGAGATCCCCTCTCGCGCCCAGTCTCCGGAGCTTCAGGCGTG
GCTCGAGCGACAAGCGCGCGACACCCTCTCCCGATGGTGGTccccaggga
ggggggggcggggggtgggggtagGCAAGCCGGACGGGGACCTTGACGCC
TCGGACGATAAGccGCTTCGTACGCTGTTCGAGCGGATCCAGCATCTCTC
CCGTTCCATGCGCCTGCAAGACGGTGGGAAAAGCACCAGCGCAAACAGCG
CCTTCCCGCTCCGATACTTGGTTGAGGTCCTGTTGGAAGTCGAGGCAGAG
GTCGACGCCGCTCTGGGTcgcgttccctccttccctccctcccccggccc
ctgcttcccccacCGCACATGGCGGGCCCTGCGGCAGGTGCAATGGGCCT
TCATCGACTTGTTCTTGGAGCACGTGAGCGTCTACCGGGAGTCAAGGATG
AAGGCGCCAGAGGTCTCGCAACCCGGGAGAACCTACCCGCCTGCCTTCCA
TCGGCCCATGTCCTGGTCCCGGGTGCATGTGTTGGACGCCCTGTGTGACC
TGACCACCCAGTGGTACGCGGCCTTGAAAGAGGCGCCGACCGTGGGCGGA
CtcgggcaaggagaaggcgtgATGATCGATACCCGGCAACAGTCCATGGT
GGTCCGAGAACTCTCGCGCCTGGCCAACACCACGCATGCCGCAGAGTTAg
agGCCAAGCCCATTGTGGAGGAGCTCTGCAGGTTGCGGGAGCGCTTTCAA
TTTTATCCTGAACACATGGATTAAATGtgcgagacggaggagggacgcgg
gaTGCAAAGCCGGATCCAGCTCTATTGGCGATCCATTATCTTTAACGAGA
TCCCCTCTCGCGCCCAGTCTCCGGAGCTTCAGGCGTGGCTCGAGCGACAA
GCGCGCGACACCCTCTCCCGATGGTGGTccccagggaggggggggcgggg
ggtgggggtagGCAAGCCGGACGGGGACCTTGACGCCTCGGACGATAAGc
cGCTTCGTACGCTGTTCGAGCGGATCCAGCATCTCTCCCGTTCCATGCGC
CTGCAAGACGGTGGGAAAAGCACCAGCGCAAACAGCGCCTTCCCGCTCCG
ATACTTGGTTGAGGTCCTGTTGGAAGTCGAGGCAGAGGTCGACGCCGCTC
TGGGTcgcgttccctccttccctccctcccccggcccctgcttcccccac
CGCACATGGCGGGCCCTGCGGCAGGTGCAATGGGCCTTCATCGACTTGTT
CTTGGAGCACGTGAGCGTCTACCGGGAGTCAAGGATGAAGGCGCCAGAGG
TCTCGCAACCCGGGAGAACCTACCCGCCTGCCTTCCATCGGCCCATGTCC
TGGTCCCGGGTGCATGTGTTGGACGCCCTGTGTGACCTGACCACCCAGTG
GTACGCGGCCTTGAAAGAGGCGCCGACCGTGGGCGGACtcgggcaaggag
aaggcgtgATGATCGATACCCGGCAACAGTCCATGGTGGTCCGAGAACTC
TCGCGCCTGGCCAACACCACGCATGCCGCAGAGTTAgagGCCAAGCCCAT
TGTGGAGGAGCTCTGCAGGTTGCGGGAGCGCTTTCAATTTTATCCTGAAC
ACATGGATTAAATGtgcgagacggaggagggacgcgggaTGCAAAGCCGG
ATCCAGCTCTATTGGCGATCCATTATCTTTAACGAGATCCCCTCTCGCGC
CCAGTCTCCGGAGCTTCAGGCGTGGCTCGAGCGACAAGCGCGCGACACCC
TCTCCCGATGGTGGTccccagggaggggggggcggggggtgggggtagGC
AAGCCGGACGGGGACCTTGACGCCTCGGACGATAAGccGCTTCGTACGCT
GTTCGAGCGGATCCAGCATCTCTCCCGTTCCATGCGCCTGCAAGACGGTG
GGAAAAGCACCAGCGCAAACAGCGCCTTCCCGCTCCGATACTTGGTTGAG
GTCCTGTTGGAAGTCGAGGCAGAGGTCGACGCCGCTCTGGGTcgcgttcc
ctccttccctccctcccccggcccctgcttcccccacCGCACATGGCGGG
CCCTGCGGCAGGTGCAATGGGCCTTCATCGACTTGTTCTTGGAGCACGTG
AGCGTCTACCGGGAGTCAAGGATGAAGGCGCCAGAGGTCTCGCAACCCGG
GAGAACCTACCCGCCTGCCTTCCATCGGCCCATGTCCTGGTCCCGGGTGC
ATGTGTTGGACGCCCTGTGTGACCTGACCACCCAGTGGTACGCGGCCTTG
AAAGAGGCGCCGACCGTGGGCGGACtcgggcaaggagaaggcgtgATGAT
CGATACCCGGCAACAGTCCATGGTGGTCCGAGAACTCTCGCGCCTGGCCA
ACACCACGCATGCCGCAGAGTTAgagGCCAAGCCCATTGTGGAGGAGCTC
TGCAGGTTGCGGGAGCGCTTTCAATTTTATCCTGAACACATGGATTAAAT
GtgcgagacggaggagggacgcgggaTGCAAAGCCGGATCCAGCTCTATT
GGCGATCCATTATCTTTAACGAGATCCCCTCTCGCGCCCAGTCTCCGGAG
CTTCAGGCGTGGCTCGAGCGACAAGCGCGCGACACCCTCTCCCGATGGTG
GTccccagggaggggggggcggggggtgggggtagGCAAGCCGGACGGGG
ACCTTGACGCCTCGGACGATAAGccGCTTCGTACGCTGTTCGAGCGGATC
CAGCATCTCTCCCGTTCCATGCGCCTGCAAGACGGTGGGAAAAGCACCAG
CGCAAACAGCGCCTTCCCGCTCCGATACTTGGTTGAGGTCCTGTTGGAAG
TCGAGGCAGAGGTCGACGCCGCTCTGGGTcgcgttccctccttccctccc
tcccccggcccctgcttcccccacCGCACATGGCGGGCCCTGCGGCAGGT
GCAATGGGCCTTCATCGACTTGTTCTTGGAGCACGTGAGCGTCTACCGGG
AGTCAAGGATGAAGGCGCCAGAGGTCTCGCAACCCGGGAGAACCTACCCG
CCTGCCTTCCATCGGCCCATGTCCTGGTCCCGGGTGCATGTGTTGGACGC
CCTGTGTGACCTGACCACCCAGTGGTACGCGGCCTTGAAAGAGGCGCCGA
CCGTGGGCGGACtcgggcaaggagaaggcgtgATGATCGATACCCGGCAA
CAGTCCATGGTGGTCCGAGAACTCTCGCGCCTGGCCAACACCACGCATGC
CGCAGAGTTAgagGCCAAGCCCATTGTGGAGGAGCTCTGCAGGTTGCGGG
AGCGCTTTCAATTTTATCCTGAACACATGGATTAA back to top
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