EWM26877.1, cds3795 (CDS) Nannochloropsis gaditana

Overview
NameEWM26877.1
Unique Namecds3795
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:95379..95486 +
Alignment locationCM002462.1:95631..95747 +
Alignment locationCM002462.1:95895..95965 +
Alignment locationCM002462.1:96173..96641 +
Alignment locationCM002462.1:96812..96883 +

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Properties
Property NameValue
Protein idEWM26877.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100576g4.2313.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:95379..95486 +
CM002462.1supercontigCM002462.1:95631..95747 +
CM002462.1supercontigCM002462.1:95895..95965 +
CM002462.1supercontigCM002462.1:96173..96641 +
CM002462.1supercontigCM002462.1:96812..96883 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26877.1 vs. NCBI_GenBank
Match: gi|585108989|gb|EWM26877.1| (hypothetical protein Naga_100576g4 [Nannochloropsis gaditana])

HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 
Query:    1 MCETEEGRGMQSRIQLYWRSIIFNEIPSRAQSPELQAWLERQARDTLSRWWSPGRGGRGVGVGKPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD 278
            MCETEEGRGMQSRIQLYWRSIIFNEIPSRAQSPELQAWLERQARDTLSRWWSPGRGGRGVGVGKPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD
Sbjct:    1 MCETEEGRGMQSRIQLYWRSIIFNEIPSRAQSPELQAWLERQARDTLSRWWSPGRGGRGVGVGKPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD 278
[Close]
BLAST of EWM26877.1 vs. NCBI_GenBank
Match: gi|553187366|ref|XP_005854595.1| (hypothetical protein NGA_0195200 [Nannochloropsis gaditana CCMP526] >gi|422294461|gb|EKU21761.1| hypothetical protein NGA_0195200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 443.351 bits (1139), Expect = 2.670e-156
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:   64 KPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD 278
            KPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD
Sbjct:   14 KPDGDLDASDDKPLRTLFERIQHLSRSMRLQDGGKSTSANSAFPLRYLVEVLLEVEAEVDAALGRVPSFPPSPGPCFPHRTWRALRQVQWAFIDLFLEHVSVYRESRMKAPEVSQPGRTYPPAFHRPMSWSRVHVLDALCDLTTQWYAALKEAPTVGGLGQGEGVMIDTRQQSMVVRELSRLANTTHAAELEAKPIVEELCRLRERFQFYPEHMD 228
The following BLAST results are available for this feature:
BLAST of EWM26877.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108989|gb|EWM26877.1|0.000e+0100.00hypothetical protein Naga_100576g4 [Nannochloropsi... [more]
gi|553187366|ref|XP_005854595.1|2.670e-156100.00hypothetical protein NGA_0195200 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3804rna3804Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications