rna3794, rna3794 (mRNA) Nannochloropsis gaditana

Overview
Namerna3794
Unique Namerna3794
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length733
Alignment locationCM002462.1:71196..72351 -

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Properties
Property NameValue
Productnucleotide transporter 3
Orig transcript idgnl|cribi|Naga_102094g1.3239.mrna
Orig protein idgnl|cribi|Naga_102094g1.3239
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:71196..72351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102094g1gene3652Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3794rna3794-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26888.1cds3785Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3794 ID=rna3794|Name=rna3794|organism=Nannochloropsis gaditana|type=mRNA|length=733bp
AGAGGTCAATTGCTACTATCTTGACAGAGGGCAACCAACAAAAGAAAAGG
GAAGGGCGAAACAACACAAAATAGCGGCCCAACCCATCATGGGAATGCTC
GACGGAGCAGCAGCATCATCGCCCAGACTCGCACGAGCAGCCCCGTCCCA
CTTGCTTGTTTTCCATAACATGCCGCCCTCATGCCCCGCGGTTGAGCTGC
CTTCAGTTTCCAAGATGTCAAGCAGCCAGGCCACGACCATACCAAGAAGA
AGAGTACTGACTCGTATACCCTCCATGGGTGGATTCTCCCTTCCCTCCAC
CTCCTTCCTCTCCTCCTCCTCTCCTCCTTGCGGGCGGTCGTCTCGTGCCT
TGGGGCGCGGCCTCACCTTCCTCTTGATCGGCACCTTTCTCCTGGGTTTC
GTCCATTTTGTGAAAGCCGAAACACAGGAGACCCCAGAAGTTGGCAGCCG
CGACGGCAATGTGGCATTCTTTCGGACCCAGACGTTGGAGGAGGGGCCCT
TGGCCAAGGAAGCCGGGGCCCCGACGACGAGGATGAACAAGGAAGAGGGG
GACAGGGGCGTGGAGGAGGAGAGCCTTTCCCGGGGGTTCTGGCCCGCATT
TCTCAACTCCTTGTCGATGATCCTCGTCACGGAGCTGGGGGACAAGACCT
TCTTTATAGCCGCCGTCCTTGCCATGCGATACGACCGTCTCCTCATCTTT
GGGGGGGCCATCTGTGAGGGAGGAGGAGGGAGG
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protein sequence of rna3794

>rna3794-protein ID=rna3794-protein|Name=rna3794|organism=Nannochloropsis gaditana|type=polypeptide|length=147bp
MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLM
PDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQR
GAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE
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mRNA from alignment at CM002462.1:71196..72351-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3794 ID=rna3794|Name=rna3794|organism=Nannochloropsis gaditana|type=mRNA|length=1156bp|location=Sequence derived from alignment at CM002462.1:71196..72351- (Nannochloropsis gaditana)
CTCAGGTCCTTGCTAAGCGGTATTTCACCGCCTTGTACCCCCATGATCCG GCCCGCGTGACCGATGCCTTCGCCTCTTTCATGGGCCTCTTTGGACAGGT AGGGAGGGAGGGAGGCAGGCAGGCAGGACGGAAGCGCGGAAGGAAAGGAG ATGAGCGTGACGACGACATTGCTCTCTTACGCTGGCCATTCGTAAGGTGT TTGGGAAAGGGTGTGAGTTCTTTGAGGATAAGTGTGGGAGATGAATCCCT CCAAACGAGTCCTCTAGACCCTCTTCCCCCCTCCCATGCTGACTTTCCCC TCCGACGTGCTGGCCCCTTTTCCTGCTCGCCCCTTTTCCTGCCCGCCCTC CCTCCATCCCTCCCAGGTGACCAACGGCATTTCTTTCCTGTTCTCTCTTA CGGGGACCTCCTTCGTCATCCGCCGTCTCGGCCTTTATCGGTCTTTGGTC GCTTTTCCCCTTCTTTGCATGGGGGCGATCGCGGTGGCCATGTTGATGCC CGATTTATGGGTAAGGAGGGAGGGAGGGCGGGGGGGAGTGCAGGGGGGAG GGCGGGGGGGCGATGGTGCACTTCCGCATGGAGATATAGAAGGGTTCGAG GCATGGACGCGGGGTGGGGGGGAAGTAAGATTCAATTGAATAAGACGTTA TTGAATTCCTTCGCGCCTCGACTGCGGGTACCCCTTCGCTCATTCATTTC CCCTCCTTCCCTCCCTTCCTGACAGGTGGTGTTTGCCTGCATGATGTTCT TGAAAGCCCTCTCCTACTCGTTGAACAACCCGTGCAAAGAGATGCTGTAC CAGCCCACCAACACCGCTGTTAAGTTCAAGAGCAAGAGCTGGATCGATAT CTTCGGACAGCGGGGGGCCAAAGCTGCGGGTTCGGTCGTGACGAACGCTT TGTCCGACTCGGTTCGGAGTTTGGTGTTTTACGGAGGTGCGTCGCTGTTT TTCGGCCTTTTTTCTCTCGGGGCGTGCCGTTTCTTGCTGGGGATATTCTC AAGAGCTCCGAGACCGCCGGCTTTGTACTGTCATGGTCACCACCTCCCTC CTTCCCTCCCTCCCTCCTTTCCACCGTTCCGTGCAGGCCTGATCTCGGTC TTCATATCCGCCTTCCTGGTGTGGGTGGCTGCGTGGATGGGGACCCGTTT CGAGGA
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Coding sequence (CDS) from alignment at CM002462.1:71196..72351-

>rna3794 ID=rna3794|Name=rna3794|organism=Nannochloropsis gaditana|type=CDS|length=1772bp|location=Sequence derived from alignment at CM002462.1:71196..72351- (Nannochloropsis gaditana)
GCCTGATCTCGGTCTTCATATCCGCCTTCCTGGTGTGGGTGGCTGCGTGG
ATGGGGACCCGTTTCGAGGAGTGGTGTTTGCCTGCATGATGTTCTTGAAA
GCCCTCTCCTACTCGTTGAACAACCCGTGCAAAGAGATGCTGTACCAGCC
CACCAACACCGCTGTTAAGTTCAAGAGCAAGAGCTGGATCGATATCTTCG
GACAGCGGGGGGCCAAAGCTGCGGGTTCGGTCGTGACGAACGCTTTGTCC
GACTCGGTTCGGAGTTTGGTGTTTTACGGAGGTGACCAACGGCATTTCTT
TCCTGTTCTCTCTTACGGGGACCTCCTTCGTCATCCGCCGTCTCGGCCTT
TATCGGTCTTTGGTCGCTTTTCCCCTTCTTTGCATGGGGGCGATCGCGGT
GGCCATGTTGATGCCCGATTTATGGATGGGCCTCTTTGGACAGGCCTGAT
CTCGGTCTTCATATCCGCCTTCCTGGTGTGGGTGGCTGCGTGGATGGGGA
CCCGTTTCGAGGAGTGGTGTTTGCCTGCATGATGTTCTTGAAAGCCCTCT
CCTACTCGTTGAACAACCCGTGCAAAGAGATGCTGTACCAGCCCACCAAC
ACCGCTGTTAAGTTCAAGAGCAAGAGCTGGATCGATATCTTCGGACAGCG
GGGGGCCAAAGCTGCGGGTTCGGTCGTGACGAACGCTTTGTCCGACTCGG
TTCGGAGTTTGGTGTTTTACGGAGGTGACCAACGGCATTTCTTTCCTGTT
CTCTCTTACGGGGACCTCCTTCGTCATCCGCCGTCTCGGCCTTTATCGGT
CTTTGGTCGCTTTTCCCCTTCTTTGCATGGGGGCGATCGCGGTGGCCATG
TTGATGCCCGATTTATGGATGGGCCTCTTTGGACAGGCCTGATCTCGGTC
TTCATATCCGCCTTCCTGGTGTGGGTGGCTGCGTGGATGGGGACCCGTTT
CGAGGAGTGGTGTTTGCCTGCATGATGTTCTTGAAAGCCCTCTCCTACTC
GTTGAACAACCCGTGCAAAGAGATGCTGTACCAGCCCACCAACACCGCTG
TTAAGTTCAAGAGCAAGAGCTGGATCGATATCTTCGGACAGCGGGGGGCC
AAAGCTGCGGGTTCGGTCGTGACGAACGCTTTGTCCGACTCGGTTCGGAG
TTTGGTGTTTTACGGAGGTGACCAACGGCATTTCTTTCCTGTTCTCTCTT
ACGGGGACCTCCTTCGTCATCCGCCGTCTCGGCCTTTATCGGTCTTTGGT
CGCTTTTCCCCTTCTTTGCATGGGGGCGATCGCGGTGGCCATGTTGATGC
CCGATTTATGGATGGGCCTCTTTGGACAGGCCTGATCTCGGTCTTCATAT
CCGCCTTCCTGGTGTGGGTGGCTGCGTGGATGGGGACCCGTTTCGAGGAG
TGGTGTTTGCCTGCATGATGTTCTTGAAAGCCCTCTCCTACTCGTTGAAC
AACCCGTGCAAAGAGATGCTGTACCAGCCCACCAACACCGCTGTTAAGTT
CAAGAGCAAGAGCTGGATCGATATCTTCGGACAGCGGGGGGCCAAAGCTG
CGGGTTCGGTCGTGACGAACGCTTTGTCCGACTCGGTTCGGAGTTTGGTG
TTTTACGGAGGTGACCAACGGCATTTCTTTCCTGTTCTCTCTTACGGGGA
CCTCCTTCGTCATCCGCCGTCTCGGCCTTTATCGGTCTTTGGTCGCTTTT
CCCCTTCTTTGCATGGGGGCGATCGCGGTGGCCATGTTGATGCCCGATTT
ATGGATGGGCCTCTTTGGACAG
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Synonyms
Publications