EWM26888.1, cds3785 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|585109009|gb|EWM26888.1| (nucleotide transporter 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 296.975 bits (759), Expect = 8.437e-102 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE Sbjct: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|676377923|ref|XP_009032240.1| (hypothetical protein AURANDRAFT_60513 [Aureococcus anophagefferens] >gi|323456705|gb|EGB12571.1| hypothetical protein AURANDRAFT_60513 [Aureococcus anophagefferens]) HSP 1 Score: 184.111 bits (466), Expect = 6.798e-53 Identity = 85/147 (57.82%), Postives = 112/147 (76.19%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MG+FGQ NG+SF+FSL GTS VIRRLGL ++L+ FP LC+GAI P L +VF M+ LK SY LNNPCKE+LYQPT+++VKFK+KSWID+FG RG+KA GSVVTN +DS L+ YG +++ +S+FL++VA W G +F+ Sbjct: 336 MGVFGQAANGLSFVFSLLGTSMVIRRLGLNKTLLLFPTLCLGAICCVYTTPTLEMVFLAMLLLKGFSYCLNNPCKEILYQPTSSSVKFKAKSWIDVFGARGSKALGSVVTNQFADSAADLLTYGSFVAMGVSSFLIYVAYWQGAQFD 482
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|397647795|gb|EJK77857.1| (hypothetical protein THAOC_00278 [Thalassiosira oceanica]) HSP 1 Score: 174.096 bits (440), Expect = 2.590e-48 Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQ TN +SFL S GTS +IR LGL +L+ FP +C+ I + P L VVFA MM LKA SY+LNNP KEMLYQPT++ VK+K+KSWIDIFG RG+KA GSVVTNA S S L+ G L+ + +++FL+W A +MG +FE Sbjct: 440 MGLFGQATNTLSFLLSFFGTSAIIRHLGLRTTLLLFPSICLAVIITVRMYPTLNVVFAAMMILKANSYALNNPTKEMLYQPTSSTVKYKAKSWIDIFGARGSKALGSVVTNAFSASASELIDKGSLVGMCVASFLIWNAKFMGKKFE 586
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|298705965|emb|CBJ29086.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.555 bits (436), Expect = 3.802e-48 Identity = 88/146 (60.27%), Postives = 111/146 (76.03%), Query Frame = 0 Query: 2 GLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 G+FGQVTN ISF FSL GTS VIRRLGL +L+AFP +C+ + + M P L+VVF ++ LK SYSLNNPCKE+LYQPTN+AVKFKSKSWIDIFG R +KA GS+VT+A S S+ L+ GG ++ +AFL+WVA MG +F+ Sbjct: 378 GMFGQVTNTISFGFSLLGTSMVIRRLGLKTTLLAFPCMCLAVVIMVMAFPQLYVVFLALILLKGFSYSLNNPCKEILYQPTNSAVKFKSKSWIDIFGARMSKAGGSLVTDAFSSSIPGLIHVGGSVAAGGAAFLIWVAWVMGRKFD 523
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|224001282|ref|XP_002290313.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973735|gb|EED92065.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 173.326 bits (438), Expect = 6.574e-48 Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQ TN +SFL S GTS VIR+LGL +L+ FP +C+ I L P L VVFA MM LKA SY+LNNP KEMLYQPT++ VK+K+KSWIDIFG RG+KA GSVVTNA S S LV G L+ + +++FL+W A +MG +F+ Sbjct: 438 MGLFGQATNTLSFLLSFFGTSAVIRKLGLRTTLLLFPSICLITIITVRLYPTLDVVFAAMMILKANSYALNNPTKEMLYQPTSSNVKYKAKSWIDIFGARGSKALGSVVTNAFSHSAVELVDKGSLVGMCVASFLIWNANFMGKKFD 584
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|219129839|ref|XP_002185087.1| (nucleotide transporter 3 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403582|gb|EEC43534.1| nucleotide transporter 3 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 167.162 bits (422), Expect = 1.130e-45 Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQ TN +SFL SL GTS VIR LGL +L+ FP LC+ I P L+VVF M+ LKA SY+LNNP KEMLYQPT++AV++K+KSWIDIFG RG+KA GSVVTNA SDS LV G L+ + +++FL+W A +MG +F+ Sbjct: 441 MGLFGQATNTLSFLLSLFGTSAVIRYLGLRLTLLLFPSLCLAVIIFVRFRPTLYVVFGAMITLKACSYALNNPTKEMLYQPTSSAVRYKAKSWIDIFGARGSKAMGSVVTNAFSDSATRLVANGSLVGMAVASFLIWNATFMGRKFD 587
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|1072238131|gb|OEU22858.1| (hypothetical protein FRACYDRAFT_223641 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 163.696 bits (413), Expect = 1.153e-44 Identity = 86/147 (58.50%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFG TN +SF+FSL GTS +IR+LGL +L+ FP LC+ I + P L+VVF M+ LKA SY+LNNP KE+LYQPT+ AV++K+KSWIDIFG RG+KA GSVVTNA SDS +LV G L+ + +S FL+W A +MG FE Sbjct: 417 MGLFGVATNSLSFIFSLLGTSAIIRKLGLRLTLLLFPSLCLIVIIIVRYRPTLYVVFLAMIMLKANSYALNNPTKEILYQPTSGAVRYKAKSWIDIFGARGSKALGSVVTNAFSDSAENLVANGSLVGMAVSCFLIWNARFMGKCFE 563
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|1210528389|dbj|GAX13078.1| (hypothetical protein FisN_2Hh587 [Fistulifera solaris]) HSP 1 Score: 159.458 bits (402), Expect = 5.162e-43 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQ TN +SFLFSL GTS VIR LGL +L+ FP LC+ I L P L+VVF MM LKA SY+LNNP KE+LYQPT++AV++K+KSWIDIFG RG+KA GS+VTN SDS +L+ G + + +++FL+W A +MG +F+ Sbjct: 409 MGLFGQATNSLSFLFSLFGTSAVIRFLGLRLTLLLFPSLCLCVIIFVRLYPTLYVVFGAMMLLKANSYALNNPTKEILYQPTSSAVRYKAKSWIDIFGARGSKALGSLVTNFFSDSAANLIANGSFVGMGVASFLIWNARFMGKKFD 555
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|1210530829|dbj|GAX10561.1| (hypothetical protein FisN_2Lh587 [Fistulifera solaris]) HSP 1 Score: 159.073 bits (401), Expect = 6.143e-43 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 1 MGLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 MGLFGQ TN +SFLFSL GTS VIR LGL +L+ FP LC+ I L P L+VVF MM LKA SY+LNNP KE+LYQPT++AV++K+KSWIDIFG RG+KA GS+VTN SDS +L+ G + + +++FL+W A +MG +F+ Sbjct: 409 MGLFGQATNSLSFLFSLFGTSAVIRFLGLRLTLLLFPSLCLCVIIFVRLYPTLYVVFGAMMLLKANSYALNNPTKEILYQPTSSAVRYKAKSWIDIFGARGSKALGSLVTNFFSDSAANLIANGSFVGMGVASFLIWNARFMGKKFD 555
BLAST of EWM26888.1 vs. NCBI_GenBank
Match: gi|1173940537|gb|OQR89924.1| (hypothetical protein ACHHYP_05942 [Achlya hypogyna]) HSP 1 Score: 149.443 bits (376), Expect = 3.776e-40 Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 2 GLFGQVTNGISFLFSLTGTSFVIRRLGLYRSLVAFPLLCMGAIAVAMLMPDLWVVFACMMFLKALSYSLNNPCKEMLYQPTNTAVKFKSKSWIDIFGQRGAKAAGSVVTNALSDSVRSLVFYGGLISVFISAFLVWVAAWMGTRFE 147 G FG N ISF+ SL GTS+V+R GL +L+ FPLL + A+AV + P LWVVF M+FLKA +Y++NNP KEMLY TN+AVKFK+KSWID+FG R AKA GS +TN L S L+ YG L+S+ I+ L+ VA+WMGT+F Sbjct: 307 GKFGMAVNTISFIASLLGTSWVLRTCGLRPTLMGFPLLLLAAVAVVYVFPTLWVVFGAMIFLKATTYAINNPAKEMLYSVTNSAVKFKAKSWIDVFGGRMAKATGSSITNGLKSSPVLLMQYGSLVSMAIALLLLGVASWMGTQFN 452 The following BLAST results are available for this feature:
BLAST of EWM26888.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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