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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100103g6.7049.mrna |
| Orig protein id | gnl|cribi|Naga_100103g6.7049 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:34831..35763 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3783 ID=rna3783|Name=rna3783|organism=Nannochloropsis gaditana|type=mRNA|length=1840bp
GCATAAGAGACCAATAGTGTACATGCTCTTTAAGCAAACACAATACAAAG
ATGAAGCCGGACTAATTACTTAATACTCATTTCTTCTTACCTGTCAGGAA
CACAATTCCATACAAGTCCGACTTCACACGATTTTACGTAAATTAATCGA
TGGCAAGTATCTCTAACCTTATGCGGTTGGCTACCCAAGGCGTTTTAGCC
TTACTCCCAACGTCATCTCCCGAAGGAAGCATCACTGACGCATCACTCGC
GAGCGCTACAAATAGCGTCACGCCGTTGCTTCGGGGTCTTGCATACCCAT
CCTTTACTAAAGCTATGCATGGTCCAATTGATCTGGGAAAAGAAGAGCTG
ACATGGACAGGAACCAATAAGGAGTTGCGTGTGAATGGCAAAACATTTCA
TCTAAAAGGTTTAAGCTGGTTTGGCCTCGAGGTCGGGGACTCAAACATGC
TACTTGGCCTTAACAACAGAGGCTTAGACGAGATCCTTCAATTCCTGGTT
GATAATAATTTTAATGCTATCCGTGTGCCTTTCTCAACAAAATGGGCTTT
GGATTACGATACTGGTGTCAGGGGTTATTTCCGTGACGGAGACATCAATC
AGCTTTCTCGTCGACAGTTTTTGAACAAATTTATCGAGCGAGCCGCAGAC
TTTAAAATTTTAGTCATGCTTGATAGTCATCGTTTAAATGATCAAGAAAT
TCCGGAACTGTGGTACTCTCAGGAATATACACAAGAGGATATGCTGGCGG
CCTGGGATATCCTTCTGGGGGATCTGAAGCACCATTGGAACCTGTTTGCC
ATCGACCTCAAGAATGAACCGCATGGCGCTGCAACATGGGGTTCAGGGAA
CGCTGCCACCGATTGGAACACGGCAGCCGAGAAAATTGGCAAACATTTGT
TGACGAAGCACCCGGAGTTCAAAGGACTGGTCTTTGTCGAGGGCTTGGGG
TATTCTATCGAGTTCGAGAAGATTAAGACCCACCCCATCGATTTCGGAAA
GCCCGAGTTCAACGAGCGCCTCGTCTATTCCCCCCACCAATATGGGCCGT
CGGTAACGGGAGACCTGCATTTTGCCGGGTATGTGAACTTTCCTGCTTCG
CAATTGAGCGAATGGGAACGCTGCTGGGGTTTCATTGAGGAGAAAACGGG
CCATGCATGTGTGCTAGGGGAGTGGGGAGGGAAGTATGACAGTTATCACA
ACGACAAGGACATGGTTTGGCAGGACCGTTTTGCCAAGTACCTGGTTGAA
AAGTGCATGTCGGATCAGTTCGTGTGGGACCTGAACCCGGAGAGCGGGGA
CACTGGGGGGGTCCTCAAGGCCAATTGGTGGGACGCGGAGGAGAAGAAAC
TCGCCCTCTACGATACTGTCCAGCCCCATCCGTCCTGGCTATGGAAGGAG
GGAGATACTTTCTATTTGGAACCTGGCGAGTACGCGAACCCGAAGTGCGA
CCCTTACAACAAGAAGCACTGAGGACGTAGGGTAAAAGGAGGACGGGGGG
GGATGTCAATTTGTACGCATATTGAGATGATAGGGCACGTCCTGCCTTGT
CTCGACTGTGATTAAGGATACTACGAGCTACTGGAGAAACGGGCAGCATT
GGGGATGTATGTCTGTGTGTATGGAGAAGCAGGAAAAGATTCAGAAGCAT
TTTTAGACCCAAAGACTTAAAATGTATCCTTTTCTCTTCTTTGAACTTCA
ATATTGGCGCTTTGAAAGCGCTTTTTAGGACAGCACGAGCCTGGAATTGG
GACTAATTCCACATAAAAGTACATGACCGACGTGAAAGTGACACGTTTGT
CTAAAGACAGAGAAGTAAATGCAATGTCACTCTCAGAATA back to topprotein sequence of rna3783 >rna3783-protein ID=rna3783-protein|Name=rna3783|organism=Nannochloropsis gaditana|type=polypeptide|length=276bp
MRHRHFQFLMSLVTFSVCLPSKILHMAFLSQMPLSTAQRTRPFPKLARNT
SIGPSGLPLFKDIESMHPKEIYKLVMDNEYNKDRLYIIAMMLTGEIIRLR
DQVRMEKSSRKVDISRGHATAMKWQTEVAHQKIKILSQEVKIGNFETQIS
MLKMANQALIEEFTSFEKDIKEIVERKDEDLKKRRGDMPANKKGEALLED
LEKDYNHDEVGNDEEDGHNDEDKGNEEGKGEGGDRNEREKRREKDIKGGD
IWKKIPNIEKDPILTNLERLAQKLEE back to topmRNA from alignment at CM002462.1:34831..35763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3783 ID=rna3783|Name=rna3783|organism=Nannochloropsis gaditana|type=mRNA|length=933bp|location=Sequence derived from alignment at CM002462.1:34831..35763+ (Nannochloropsis gaditana)
GATGCGCCACCGACACTTTCAATTCCTTATGTCATTAGTGACCTTTTCAG
TATGTCTACCTTCAAAAATCCTACACATGGCTTTTTTATCACAAATGCCA
TTGTCAACTGCTCAACGCACCAGACCCTTTCCAAAATTGGCTCGTAACAC
TTCAATCGGCCCTAGTGGCCTCCCGCTCTTCAAGGATATTGAAAGCATGC
ACCCTAAGGAGATTTACAAGCTAGTGATGGATAATGAATACAACAAAGAT
CGGCTTTACATTATTGCAATGATGCTAACTGGGGAAATTATACGTCTTCG
GGATCAGGTGAGGATGGAAAAAAGTTCGCGGAAGGTTGACATTTCTCGCG
GACATGCTACAGCAATGAAATGGCAGACTGAAGTAGCTCATCAGAAAATC
AAAATATTGTCACAAGAAGTAAAGATTGGAAATTTCGAAACTCAAATTAG
CATGCTTAAGATGGCAAATCAAGCATTGATTGAGGAATTTACTTCATTCG
AAAAAGATATTAAGGAAATTGTAGAGCGTAAAGACGaggatttaaaaaaa
agaagaggtgATATGCCAGCTAACAAGAAAGGTGAAGCATTGTTGGAAGA
TCTTGAAAAAGATTATAATCACGACGAGGTCGGcaatgacgaggaagatg
gTCATAACGACGAAGACAAAGGCaacgaagaaggaaaaggggaaggagga
gacagaaaCGAAAGAGAGAAACGGCGAGAAAAAGATATCAAAGGTGGGGA
CATTTGGAAAAAGATTCCCAACATAGAGAAAGACCCGATACTAACAAATT
TGGAGCGTTTGGCTCAAAAGTTGGAGGAATAGATGGAAGTACCAGCCGAG
AAAATTGTAGATGATGCGGAAAGCTGTACAAGACACAAAAACCTGATCTC
GCTAAGACTTTGTTGTAAAGCCGCCTATCAAAA back to topCoding sequence (CDS) from alignment at CM002462.1:34831..35763+ >rna3783 ID=rna3783|Name=rna3783|organism=Nannochloropsis gaditana|type=CDS|length=831bp|location=Sequence derived from alignment at CM002462.1:34831..35763+ (Nannochloropsis gaditana)
ATGCGCCACCGACACTTTCAATTCCTTATGTCATTAGTGACCTTTTCAGT
ATGTCTACCTTCAAAAATCCTACACATGGCTTTTTTATCACAAATGCCAT
TGTCAACTGCTCAACGCACCAGACCCTTTCCAAAATTGGCTCGTAACACT
TCAATCGGCCCTAGTGGCCTCCCGCTCTTCAAGGATATTGAAAGCATGCA
CCCTAAGGAGATTTACAAGCTAGTGATGGATAATGAATACAACAAAGATC
GGCTTTACATTATTGCAATGATGCTAACTGGGGAAATTATACGTCTTCGG
GATCAGGTGAGGATGGAAAAAAGTTCGCGGAAGGTTGACATTTCTCGCGG
ACATGCTACAGCAATGAAATGGCAGACTGAAGTAGCTCATCAGAAAATCA
AAATATTGTCACAAGAAGTAAAGATTGGAAATTTCGAAACTCAAATTAGC
ATGCTTAAGATGGCAAATCAAGCATTGATTGAGGAATTTACTTCATTCGA
AAAAGATATTAAGGAAATTGTAGAGCGTAAAGACGaggatttaaaaaaaa
gaagaggtgATATGCCAGCTAACAAGAAAGGTGAAGCATTGTTGGAAGAT
CTTGAAAAAGATTATAATCACGACGAGGTCGGcaatgacgaggaagatgg
TCATAACGACGAAGACAAAGGCaacgaagaaggaaaaggggaaggaggag
acagaaaCGAAAGAGAGAAACGGCGAGAAAAAGATATCAAAGGTGGGGAC
ATTTGGAAAAAGATTCCCAACATAGAGAAAGACCCGATACTAACAAATTT
GGAGCGTTTGGCTCAAAAGTTGGAGGAATAG back to top
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