EWM26912.1, cds3774 (CDS) Nannochloropsis gaditana

Overview
NameEWM26912.1
Unique Namecds3774
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:34832..35662 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26912.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100103g6.7049.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:34832..35662 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26912.1 vs. NCBI_GenBank
Match: gi|585109042|gb|EWM26912.1| (hypothetical protein Naga_100103g6 [Nannochloropsis gaditana])

HSP 1 Score: 567 bits (1460), Expect = 0.000e+0
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 
Query:    1 MRHRHFQFLMSLVTFSVCLPSKILHMAFLSQMPLSTAQRTRPFPKLARNTSIGPSGLPLFKDIESMHPKEIYKLVMDNEYNKDRLYIIAMMLTGEIIRLRDQVRMEKSSRKVDISRGHATAMKWQTEVAHQKIKILSQEVKIGNFETQISMLKMANQALIEEFTSFEKDIKEIVERKDEDLKKRRGDMPANKKGEALLEDLEKDYNHDEVGNDEEDGHNDEDKGNEEGKGEGGDRNEREKRREKDIKGGDIWKKIPNIEKDPILTNLERLAQKLEE 276
            MRHRHFQFLMSLVTFSVCLPSKILHMAFLSQMPLSTAQRTRPFPKLARNTSIGPSGLPLFKDIESMHPKEIYKLVMDNEYNKDRLYIIAMMLTGEIIRLRDQVRMEKSSRKVDISRGHATAMKWQTEVAHQKIKILSQEVKIGNFETQISMLKMANQALIEEFTSFEKDIKEIVERKDEDLKKRRGDMPANKKGEALLEDLEKDYNHDEVGNDEEDGHNDEDKGNEEGKGEGGDRNEREKRREKDIKGGDIWKKIPNIEKDPILTNLERLAQKLEE
Sbjct:    1 MRHRHFQFLMSLVTFSVCLPSKILHMAFLSQMPLSTAQRTRPFPKLARNTSIGPSGLPLFKDIESMHPKEIYKLVMDNEYNKDRLYIIAMMLTGEIIRLRDQVRMEKSSRKVDISRGHATAMKWQTEVAHQKIKILSQEVKIGNFETQISMLKMANQALIEEFTSFEKDIKEIVERKDEDLKKRRGDMPANKKGEALLEDLEKDYNHDEVGNDEEDGHNDEDKGNEEGKGEGGDRNEREKRREKDIKGGDIWKKIPNIEKDPILTNLERLAQKLEE 276
The following BLAST results are available for this feature:
BLAST of EWM26912.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109042|gb|EWM26912.1|0.000e+0100.00hypothetical protein Naga_100103g6 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3783rna3783Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications