|
|
Properties
| Property Name | Value |
|---|
| Product | nad h dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100103g8.7032.mrna |
| Orig protein id | gnl|cribi|Naga_100103g8.7032 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:30830..32134 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3781 ID=rna3781|Name=rna3781|organism=Nannochloropsis gaditana|type=mRNA|length=1204bp
TCTTCCTCGTTTCCGCCAGGGCCACGCATAATTGCACATGGGACATGCGA
TCAAGGCCACCTAAACGTGCCAATGCATGCCAAAGCCTCTATTACCTGGT
AGAGAGTTGCAATGGATATGGGCGCTGCTCACCCGTCGTGATGTTGTTTT
TTCCCGATGAATAAAAACCAACGGCTGCCACAGGCCCTCGGAACCATACC
ATAATTCTTTCTTCTCATCCTTCTTTTTAAACCCTCTTTGATACACACAC
GCTCTAATTGAATTTCACCGCTACTTATAGCCCCGCCGGATCAGGTTACC
GCTGGTGCTTTCTCGCTTCAGCGCCTCTTCCAGCAACTTTAATTTTCACA
CCCTACATTCCAAACATGGCCGATATTGTCAAGCCCAAAGTCCTCGCCGA
GGAGGAGGAGCAGATCCACCGCATCCGCATCACGCTCACCTCGCTGAACG
TGAAGGACCTGGAAAAGGTTTGCGAGGCATTGAAGACTCGAGCTGTGAAT
CATAGCAAGCACTTAAAGGTTGCTGGGCCTGTTCGACTCCCGACGAAGAA
GCTGAAGATCACGACCCGCAAATCTCCCAACGGCGAGGGAACCAACACGT
GGGACCGGTTCCAGATGCGCATCCACAAACGTATTATTGACCTGCACACG
TCTTCGGATGCTGTGAAGAGCATCACGAACATCGTGATTGAGCCCGGGGT
CGAAGTCGAAATTACCATCAACAACTGAGTTCGATCGATACTTGACGAGG
AATTGGGTTCTTAACGCTGTCTGCAAGCAATCCTCTTTGCTGGGTGGAGC
GAAGAAAGGGGGAGGGACACGGATGAGGTCACGTTGCGTTCTTTTCGAAA
AGAGCCATTAACCTCTACGGTCATTGCGAAGAAAGAAAAAGTGGATGGGG
CGATTTTCTGAACGCTCTTTAACTTTCGGGAAAAACATTGTCTTGCTCGA
TGAGGAGCACCTCGAGGGTCACTTAACTTTGTACCGGCCACTCTTTTTTC
CCTGAAATCAATAATCCATCTCCCTATAGCGTCATTTCTAGAGATAGACC
TTTATTGTGCCCAGAAAACCCACAAGAGTACTATCTATATACTTCAAAGG
CCTCAGCTTCCACTTTGTCCTTGCTGTTTACTTGCTTTTGGAGGAAGAGT
AGTCCAAGCTGGGAAAATACGAGTGCTGTGAGCTAATGAAGGAGAAGTAT
AAGT back to topprotein sequence of rna3781 >rna3781-protein ID=rna3781-protein|Name=rna3781|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHA
HPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYM
KPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWID
RTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYV
GDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMR
EF back to topmRNA from alignment at CM002462.1:30830..32134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3781 ID=rna3781|Name=rna3781|organism=Nannochloropsis gaditana|type=mRNA|length=1305bp|location=Sequence derived from alignment at CM002462.1:30830..32134+ (Nannochloropsis gaditana)
ACAACGCACATACAACAGCAACAGGATGCCACGTGGTAATAAAGAATTAT
CTCTTTTCCTCTGGGACCCTCTGTCACGGTTTTTGGCCTCAGCTGCCAAT
CGATGGACGTCATTCataccccccccgccccgccacccGTCCGACCCTCC
TCgacgcgtccttctcctccacgcgcatCCCATGGGGACTTCTTCTTTCA
ATGGCGCCTGCTTTGAAACAACTCATCGGTCGCTTCAAGAAGCTGGACAC
GAAGTACAGACTCTATCTCTCTACGAGGAAGGTTTTCAGCCATGTATGCA
AGCAAGTGACATAAGGGAGTATATGAAGCCGCTCTCAGACCGGCACGATG
AGGGCACACCCGATAAAGCGGCTCTCCTCCGATATATCGACCTCCTTAAG
TGGTGTGATGCCTTAATTTTTGTATATCCAACGTGGTGGTATGCCATGGT
AAGTCGGAGGCAAGGCAACATGAAAATTACCATAGAAAAAAGGATGTTGC
AAGGAGGGAGTACAAGAGAAATGGTGGCGGTACAAAGACAGCACCACAAG
CCGAATTTTCGAGTCATTTATTCCACTTGAGGGACCGTTCTTAACATTGT
TACATCAGTGCCCATACAGCACCAAGTCACTTTTTCCTTACGgatgcttc
ctcctcttgcttgtccttttccatgcaCCCGCCTAGCCCGCCATCCTGAA
AGGGTGGATCGATCGGACCTTCCTGCCTCACAGTGccttcaccctcccca
cacctacgtctcctccagcttccgTGGTGGGTCTGGTTCCATGCTTGAAA
AACATCAAGAAAGTAGGGGTCGTGACCACGTATGGCTCCTCCTACCAAGT
GATTCGATACGTGGGCGACCCAGGACGGCGGATTATCGCGCGGGGACTCC
GACCTTTGTTCGACGCGCAGTGTACTTTGCTATGGCTTGGGATGTATAGC
TGTGACACTGCCTCGCaggcggagagagaggattTTTTGGCGGAGGTGAA
CTCTTACATGAGAGAGTTCTAGAAAGGAGTCAAcctggaaatggaaaagc
cTATACATTGAAATCTGCTGCTGTGTACATTAGACTCTGTTGCAAAATAT
CGGAGTGAAAAAAATAAGGTAGACACATGAAAAAGATGTGCCTTATTCTG
AGAGTGACATTGCATTTACTTCTCTGTCTTTAGACAAACGTGTCACTTTC
ACGTCGGTCATGTACTTTTATGTGGAATTAGTCCCAATTCCAGGCTCGTG
CTGTCCTAAAAAGCGCTTTCAAAGCGCCAATATTGAAGTtcaaagaagag
aaaag back to topCoding sequence (CDS) from alignment at CM002462.1:30830..32134+ >rna3781 ID=rna3781|Name=rna3781|organism=Nannochloropsis gaditana|type=CDS|length=1518bp|location=Sequence derived from alignment at CM002462.1:30830..32134+ (Nannochloropsis gaditana)
ATGCCACGTGGTAATAAAGAATTATCTCTTTTCCTCTGGGACCCTCTGTC
ACGGTTTTTGGCCTCAGCTGCCAATCGATGGACGTCATTCataccccccc
cgccccgccacccGTCCGACCCTCCTCgacgcgtccttctcctccacgcg
catCCCATGGGGACTTCTTCTTTCAATGGCGCCTGCTTTGAAACAACTCA
TCGGTCGCTTCAAGAAGCTGGACACGAAGTACAGACTCTATCTCTCTACG
AGGAAGGTTTTCAGCCATGTATGCAAGCAAGTGACATAAGGGAGTATATG
AAGCCGCTCTCAGACCGGCACGATGAGGGCACACCCGATAAAGCGGCTCT
CCTCCGATATATCGACCTCCTTAAGTGGTGTGATGCCTTAATTTTTGTAT
ATCCAACGTGGTGGTATGCCATGCCCGCCATCCTGAAAGGGTGGATCGAT
CGGACCTTCCTGCCTCACAGTGccttcaccctccccacacctacgtctcc
tccagcttccgTGGTGGGTCTGGTTCCATGCTTGAAAAACATCAAGAAAG
TAGGGGTCGTGACCACGTATGGCTCCTCCTACCAAGTGATTCGATACGTG
GGCGACCCAGGACGGCGGATTATCGCGCGGGGACTCCGACCTTTGTTCGA
CGCGCAGTGTACTTTGCTATGGCTTGGGATGTATAGCTGTGACACTGCCT
CGCaggcggagagagaggattTTTTGGCGGAGGTGAACTCTTACATGAGA
GAGTTCTAGATGCCACGTGGTAATAAAGAATTATCTCTTTTCCTCTGGGA
CCCTCTGTCACGGTTTTTGGCCTCAGCTGCCAATCGATGGACGTCATTCa
taccccccccgccccgccacccGTCCGACCCTCCTCgacgcgtccttctc
ctccacgcgcatCCCATGGGGACTTCTTCTTTCAATGGCGCCTGCTTTGA
AACAACTCATCGGTCGCTTCAAGAAGCTGGACACGAAGTACAGACTCTAT
CTCTCTACGAGGAAGGTTTTCAGCCATGTATGCAAGCAAGTGACATAAGG
GAGTATATGAAGCCGCTCTCAGACCGGCACGATGAGGGCACACCCGATAA
AGCGGCTCTCCTCCGATATATCGACCTCCTTAAGTGGTGTGATGCCTTAA
TTTTTGTATATCCAACGTGGTGGTATGCCATGCCCGCCATCCTGAAAGGG
TGGATCGATCGGACCTTCCTGCCTCACAGTGccttcaccctccccacacc
tacgtctcctccagcttccgTGGTGGGTCTGGTTCCATGCTTGAAAAACA
TCAAGAAAGTAGGGGTCGTGACCACGTATGGCTCCTCCTACCAAGTGATT
CGATACGTGGGCGACCCAGGACGGCGGATTATCGCGCGGGGACTCCGACC
TTTGTTCGACGCGCAGTGTACTTTGCTATGGCTTGGGATGTATAGCTGTG
ACACTGCCTCGCaggcggagagagaggattTTTTGGCGGAGGTGAACTCT
TACATGAGAGAGTTCTAG back to top
|