EWM26895.1, cds3772 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|585109025|gb|EWM26895.1| (nad h dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 Query: 1 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF Sbjct: 1 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|553193328|ref|XP_005855753.1| (nad h dehydrogenase, partial [Nannochloropsis gaditana CCMP526] >gi|422293308|gb|EKU20608.1| nad h dehydrogenase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 298.13 bits (762), Expect = 1.704e-100 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 Query: 1 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAM 141 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAM Sbjct: 6 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAM 146
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|298710988|emb|CBJ32295.1| (NAD(P)H dehydrogenase (quinone) [Ectocarpus siliculosus]) HSP 1 Score: 212.616 bits (540), Expect = 2.828e-65 Identity = 105/242 (43.39%), Postives = 143/242 (59.09%), Query Frame = 0 Query: 15 PLSRFLASAA---NRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTS-SFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 PLS LA A NR TSF+PPPP +++++ HP G SF A E SL++AGH+V+ +LY+E FQ + + R +M D + ++D L+WC L+ YPTWWY+ PAILKGW+DRT +P AF LP P G + L NI+KVG+VTT+G+S+ +RYVGDPGRRI++RGLRPLF +CTLLW G+Y + +R FL +V R+F Sbjct: 13 PLSSLLAGAMRALNRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVA-----EDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|551599786|ref|XP_005781686.1| (NAD(P)H dehydrogenase [Emiliania huxleyi CCMP1516] >gi|485634482|gb|EOD29257.1| NAD(P)H dehydrogenase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 181.8 bits (460), Expect = 2.591e-53 Identity = 95/253 (37.55%), Postives = 146/253 (57.71%), Query Frame = 0 Query: 11 FLWDPLSRFLASAANRWTSFIPPPPRHPSD-PPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAA--LLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLP------HSAFTLPTPTSPPASVVG---LVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMRE 251 LW+P +R+LA N T+ +PPPPR P D R++LL+HAHP T S++ A + +E GH ++ LY+E F P M A++ Y++ + P + A + ++D L+W D+++FVYPTWW+ +PA+LKG+IDR +P A+ P + +G LV L N+K+V ++TYGS + GD GR +I G+R LFD CT+LW+G+YS D S +R DF+ +V +R+ Sbjct: 1 MLWNPATRWLAKNLNWVTTQVPPPPRSPDDVEKRKILLVHAHPR-TDSYSHALADAVEAGAKEGGHTIRRRDLYKERFSPVMTAAERGAYLRDF-----DMVPKRLASDVRSHLDDLRWADSVVFVYPTWWFNVPAMLKGYIDRVMVPATPGSGQGAWAFPDSNIQGKASIGSGGLVGHLTNVKRVAGISTYGSERYMGLLAGDNGRNMIGTGVRALFDPSCTVLWMGLYSLDFCSDEQRADFIDKVRETIRD 247
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|503416886|ref|WP_013651547.1| (flavodoxin family protein [Polymorphum gilvum] >gi|326412164|gb|ADZ69227.1| NAD(P)H dehydrogenase (Quinone) [Polymorphum gilvum SL003B-26A1]) HSP 1 Score: 170.629 bits (431), Expect = 1.351e-49 Identity = 83/209 (39.71%), Postives = 128/209 (61.24%), Query Frame = 0 Query: 44 RVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 R L+++ HP SFN A T SL+ AGHE++ + LY EGFQP M A + R Y HD G+ + + +++ + WC+ L+FVYPTWW+ +PA+LKGW+DR ++PH F +PT S G+ P +++I+K+ VVTT G+S+ V + +G+PGRR + RG+R L +C L+L Y D+++ R +LA V ++ F Sbjct: 2 RALVVYCHPCA-ESFNAAVLRTVLASLEAAGHEIRLVDLYAEGFQPAMNAEERRGY-------HDHGS-NVEPVRTHVENILWCEMLVFVYPTWWFGLPAMLKGWLDRVWVPHVTFEMPTEAS------GMRPRMQHIRKIAVVTTCGASWWVSKLIGEPGRRTLLRGMRALCAPRCRTLYLAHYKMDSSTSESRSCYLAMVTRRLKRF 195
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|1072237141|gb|OEU21868.1| (flavo protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 166.392 bits (420), Expect = 2.898e-47 Identity = 86/235 (36.60%), Postives = 128/235 (54.47%), Query Frame = 0 Query: 20 LASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASV--VGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 L N++ S++PPPP PR++L++ +HP+ S++ A T + +E GHEVQ + L E F P + + Y +++ D+ P YI LKWCD L FVYPTWW P LKG++DRT +PH + P + S VGL P L NI++V ++TYG + + GD GRR+I+ + P+F CT+ W G+YS D + R FL EV + ++E Sbjct: 16 LQVTVNQFLSYVPPPPPKNQGAPRKILIVSSHPV-PESYSLAIARTVEETAKEQGHEVQRIDLGLEKFDPVLNKKERLAYFDD-TNKDDKNLPKDVR--GYIQKLKWCDTLFFVYPTWWMNTPGALKGFLDRTLVPHHCWHFPKEETGIKSYLPVGLAPGLLNIEQVYGISTYGCTRPIATLAGDNGRRMISNAILPIFSNDCTIRWHGLYSMDFQTDENRRIFLDEVKAMVKEI 246
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|1120143533|ref|WP_073013676.1| (flavodoxin family protein [Labrenzia suaedae] >gi|1110307623|emb|SHM47139.1| Putative NADPH-quinone reductase (modulator of drug activity B) [Labrenzia suaedae]) HSP 1 Score: 164.466 bits (415), Expect = 3.872e-47 Identity = 84/209 (40.19%), Postives = 123/209 (58.85%), Query Frame = 0 Query: 44 RVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 + L+++ HP SFN A +L++AGHEV+ LYEEGF+P M A + R Y HDEG + + Y+ + WCD L+FVYPTWW+ +PA+LKGW DR ++PH F +PT G+ P +++I+K+ VVTT G+S+ V ++VG+PGR+ I RG+R L C L+L Y DT++ R +L V + F Sbjct: 2 KALVIYCHPCA-ESFNAAIRNKVTSTLEKAGHEVRLRDLYEEGFEPAMGADERRRY-------HDEGD-NVVPVESYVADICWCDMLVFVYPTWWFGLPAMLKGWFDRVWVPHVTFGMPTEDK------GMRPLMQHIRKIAVVTTCGASWAVSKWVGEPGRKTIMRGMRALCAPGCKTLYLAHYKMDTSTPESRSRYLNLVARKLSCF 195
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|1126825101|ref|WP_075216244.1| (NAD(P)H dehydrogenase [Rhizobiales bacterium MIMtkB18]) HSP 1 Score: 162.925 bits (411), Expect = 1.513e-46 Identity = 83/203 (40.89%), Postives = 123/203 (60.59%), Query Frame = 0 Query: 45 VLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNS 247 VL+++ HP SF A + L +AGH V+ + LY +GF+P M A + R Y HD G ++A + ++ LKW +AL+F+YPTWWY +PA+LKGW+DR F+PH AF +PT T G+ L+NI+++ VVTT G+S+ V + +G+PGRR + RGLR + C + +Y DT S R +LAEV++ Sbjct: 3 VLVVYCHPCA-DSFVAAVKDAALSGLAKAGHAVRIVDLYGDGFEPAMSAEERRRY-------HDAGV-NEAPVADHVAHLKWAEALLFIYPTWWYNLPAMLKGWLDRAFVPHVAFVMPTATQ------GIRGNLRNIRRIDVVTTCGASWHVSKLMGEPGRRTLTRGLRAICHPFCRTSYTALYKMDTVSPERRTRYLAEVSA 190
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|971490564|ref|WP_058898724.1| (flavodoxin family protein [Pannonibacter phragmitetus] >gi|971240119|gb|ALV27178.1| NAD(P)H dehydrogenase [Pannonibacter phragmitetus]) HSP 1 Score: 162.54 bits (410), Expect = 2.053e-46 Identity = 79/209 (37.80%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 44 RVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 + L++++HP+ SFN + + LQ+AGHEV+ + LY EGFQP M A + R Y D P KA +++ + WCD ++FVYPTWW+ +PA+LKGW DR ++PH F +P+ + G+ P +++I+K+ +VTT G+S+ V + +G+PGR+ I RGLR L +C L+L Y D+++Q R+ ++ +V + +F Sbjct: 2 KALVVYSHPV-PESFNASMRDHVVSVLQQAGHEVRLIDLYAEGFQPAMSADERRGY----HDVDSNVLPVKA----HVEAILWCDMMVFVYPTWWFGLPAMLKGWFDRVWVPHVTFEMPSEHT------GMRPKMQHIRKIAIVTTCGASWFVSKLMGEPGRKTIMRGLRALCAPRCKTLYLAHYRMDSSTQESRDRYVKKVARRLAKF 195
BLAST of EWM26895.1 vs. NCBI_GenBank
Match: gi|913723823|ref|WP_050472379.1| (flavodoxin family protein [Pannonibacter phragmitetus] >gi|907658352|gb|KND19655.1| NAD(P)H dehydrogenase [Pannonibacter phragmitetus]) HSP 1 Score: 161.77 bits (408), Expect = 3.415e-46 Identity = 79/209 (37.80%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 44 RVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252 + L++++HP+ SFN + + L++AGHEV+ L LY EGFQP M A + R Y D P KA +++ + WCD ++FVYPTWW+ +PA+LKGW DR ++PH F +P+ + G+ P +++I+K+ +VTT G+S+ V + +G+PGR+ I RGLR L +C L+L Y D+++Q R+ ++ +V + +F Sbjct: 2 KALVVYSHPV-PESFNASMRDHVVSVLKQAGHEVRLLDLYAEGFQPAMSADERRGY----HDVDSNVLPVKA----HVEAILWCDMMVFVYPTWWFGLPAMLKGWFDRVWVPHVTFEMPSEHT------GMRPKMQHIRKIAIVTTCGASWFVSKLMGEPGRKTIMRGLRALCAPRCKTLYLAHYRMDSSTQESRDRYVKKVARRLAKF 195 The following BLAST results are available for this feature:
BLAST of EWM26895.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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