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Properties
| Property Name | Value |
|---|
| Product | pentatricopeptide repeat containing protein |
| Orig transcript id | gnl|cribi|Naga_100003g111.1754.mrna |
| Orig protein id | gnl|cribi|Naga_100003g111.1754 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:922682..928651 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna378 ID=rna378|Name=rna378|organism=Nannochloropsis gaditana|type=mRNA|length=5592bp
TTCTCCTCTGTTACATGTGTTTCTAGTGCATGCCCTCAGTCAAGCACTTC
TTTACTGTACTCACATGCTTTATTGTCGATGCTGAGGATTGCCTTTGGCC
AATTCTTTCCGTAAAGTCGAAAAGGTTGTGGCTCGCGGGAGCGGACAATC
GGGTCCACGTACTCACACATTTACTTTTCCTATTTTTTGGTGCAGGCGCA
CAATCCAACCACAAGGACATGTTCAGTATATAGAAATAATAGAAAGATAC
TTCACACAAAGTGGCCTATCATTCACGGGGAAAAGCCAGAGCCAGGCCGC
TAGACCATACCTGCTAGTATCGTTATCATGGACGCCAACGACCATATTAA
ATGTTTCACACACTTTACTTGAGTTGAGACAGGAGGAGAGGGCAGCAGCA
TGAAGAATCAAAATACGCAATTGATGCAATCCGGAGATCAAAGCAATCTG
ATGGACATGCGACATGGCCCCCTGACGGGATCGCCCGATGTAAAAGTATT
CTTTCCTGCTTTATCGTCAGCCGTCAATGATGGAAATAAGCCTCAACAGG
AGCAGTATAACACGTGTTCGCGCCATTTCCCCCGTCCTGATAAGATATAC
CAGTGGCAAGAGCCCAACACTTGTCCCACTGCCGGGTCCGGCTCTACATC
TCCGGAAGCATCCTCTTCGACGAGTCCTCAAAGACAGGGCACTAAGATGG
ACGTCAACCCGGACGTTGCGCTTTATTCTTCATCCTCGTCTTCGTCCTCG
TTCGCGTCGTCCCCGTCGACGAGTGCTACGAGCCCCGCGTCTAGAGCTCA
GGCTCCTGTGGCCCTTCCTGCATCGTCCTCCGTATTATTGGGCTCTTCTC
CTTTCCATCCACAGCATTCAGCGACAGCAAGAAGGGACGATGGTCCAATC
AATGCGGGCGTGGTGCAGTGTCCGCTGACGGCGACAACTGCCGCACGTCC
CGCGACTGGGACGAATACGAACGGTGTTGCGGAGATGGATCTTCCAGGGC
AAGATTTGCTTCCCCCCCAGACATTTTGGGAATCACGCAGTCCAACTTGG
ATGAGCCGAAAAACAGCGCCCGCCTCATCTTTCGTGAAGCAGGCCGCAGC
GCCGAACTCCTCGTGTTCCATGCCCTCCTCTTCTTCATGCGCCTCCTCCT
CTTCTTCCTCTTCATCGTCTTCTTCCACGTCGCCAACCCTTGAGGGCCTA
TTAACTCTGAAGCAGACAAGTGCATCGGGACAGGAAAGGAGAGAACTTGT
GGCAACTGACGCCTCTATCTTTTCGTCGTCTCTCTCATCCAATGCGCCGC
CATGCCACGTGACCCAAGCCTTTGAAATTACCTCTGAGCCTGGGTACAAC
CCATCTCAACTTCAAGAGACGCCGTCAAACTACCGTTGGGCCTTAAACAG
CCACGGGAACTCGAGACTCCATCACTCCGCCTGGCAGACAGGAACCTTGG
AGGCGCGAGGTGCCGGTACAATCTGTTTTCCTGGGAGTAATGCGCACGTG
CTTGCCCTCGAGAAAAATCCTATAGATAGACACGGGCCTCGAGGAAGTAG
AATCACTACTGATGCGACGTCTCCCTTTGACGTGGTCACCTTGGAGGCCA
AAAATGGAATTGCGGTAGGAAAATGTGCTTCCCGCGACACTCCACTTAGC
ACCGCTTCTCGAGAAATGAACCGTCAGCATTCGCAAAAGCAGCGTCATCG
GCAGCGCCAGCCCCGACAAAATTGCCACCAGCACGCCTTGACGCAAGATC
ATGTCGATTATCTGCCAATTCGCGAGAATCTGAAAGGGAAGAGATCCGGG
CATGCGTCTATGACAATGCCGGACGGTAACCGACAAGTTCGTAAGCCTTT
CCAGGAGGATCCTCTAGTCTCGGCCTCGGAATCACAAGAAATTGATCCCA
GTTCGTGGAACTCGGTCAAGCAGGCCCAATCCTCATCGCCATATGAATCG
CTTCCCCTGCAGTATCCCTTACGGGAGAATGACTTGCTCACGGGCCCTTC
ACTGTCTCCTGTTTTCCGATTTCTGCCGAATGAGGTATTAGATGGCACGC
CCACCACACAAGCACAACAGCGTCTGAAAAGGCAGGAGGATGAAGAAGAG
TCTGAGGGTTTCATCCATTATTCACGAACGATGTCTTCGAAACCTGTGCC
TTCCGTCAGCACACAGGGTTTGTGCCGGAGTACAAATAGCTGCGCCTCTG
CATTCAAATCATTTGCAAACGCTGGAGATGAGGAAGGGGCGGAAGAAGCT
TTCTGCCAGCTAAAAAATCAGAATGGTAGACCAGGCGTGTATTTATACAA
CGCTTTGTTGAGCACTTATGCTTCCAATGGCAATTCTGAAGGCGCAGAAG
CGGTACTAAATGGCATGAAAGATGACGAAGCAGAATTCGGATTTGGGCCA
GAAAAGGCAGTGGAGCCAAATGTAGTGACGTATTCTTCTCTCATGACCGC
CTATGCGATTAAAGGCCATAGCGAGGGTGCTGAACGTGTTCTCGCGCGCA
TGCAGGTAGCCGGTATGCAGCCCAATCTTGTCACTTACAACAGCCTCGCG
ACGGCATACGCTAAAGGCGGGAATTGGCAAGGTGCAAACCAGGTGCTCAA
GCGCATGCAGCAGAGCCAGCAACTTGAGCCAACTGTTACGACTTATAATG
CTGTCCTCAATGCACATGCGAACAAGGGTCACTGGAAAGGCGCGGAAGAA
GTTGTTCAACATATGAACGAGAGCAATGTGCAGCCGAATACTACAACTTA
CAACACGTTAATAGATGCCTATGCGAACAAAGGGAATTGGGAGGGTGCCG
AGGATGTACTGCGACGCATGAACAAGCTGAACGAAGTTGAACCCAACGTG
ATATCCTTCTCGTCTGTGATAAACGCATACGCCCACCGGGGAAACTGGCA
TGGTGCTGAGAATGTGCTACGCCGGATGCAATATCAAGGCTTGCAACCAA
ATTTGATCACCTACAATAGTCTGGTCACCGCTTACGCCAAGGAGGGCCAC
TGGCAAGGTGCTGAGGATGTGTTGCGCCGGATGCATGCAAACCCGCATGT
AGAACCCAATACGACAACTTACAATTTGGTCATCAACAGCTATGCAAATA
AAGGTCATTGGAAAGGAGCGGAAGACGTCCTCCAGCGCATGCTCACGGTA
GGACATTCTCTTGGATCAGGAGGCAGCGGCAGTGCCATTGCGCCAACTGT
CATGACGTACAATTCGCTGATCAATGCGCACGCCAAAGATGGAAACTGGA
AAGGCGCAGAGGACGTCCTTCGACGCCTTTTGGAGAGAGGAGTAGAGCCA
AACGTCACAACCTTTAATTCGGTGATTAAGGCGTACACAAAGGAGGGCCA
CATCGAAGGTGTAGAGAATGTCCTGACTCGCATGACGGATGACTTCGGGT
TAAAAGCAAATGTGACGACCTGGTCATCAATCATTAATGCGTACGCGACA
CGTGGTGACTTTGTCGGGGCTGAGGACGTACTCCGACGGATGCAGGAGCA
CGGAGTGGAGCCGAACATTACGACCTTTTCCTCCGTCATAAATGCCTACG
CCAATAAAGGCCATTGGGTTGGTGCTGAGAGTGTTTTGAGTCGGCTGGAG
GTAAAGGGTCTAGAGCCAGATGTGATCACTCACAACAGCATGCTGAAGGT
ATATGTCAACGCCCGTGACGTGGACGGATGCGGAAGAGGACTGGATTTAG
TGCGTCGTTTGCTCGAAGGCCGTCGACATAAGCCCACCCATGTGACCTTC
AAGACCTTGTTTACGCTACTTCTTAAGCATCCTGACCCACGCAAGCTACA
GACAGCTATGAAACTGCTTGATGACCACGTACCCGCACGTTCCCGTACTT
CACTTGTATATGCTCCGTTAATTGAATTGTGTGGAGCCACCGGCCGCGCA
GACGCAGCGGTACGCTATTTTGAAGAGGCACGTCGCGGGGGCCACTTGGA
CAAGTATGTGGTGCGTGCGGCGAGGGCTGCTGGAATGATCGTCGGAGGCT
CTTGTGGGATTGGTGATAATGGTGTTAGGGGCCGAGGACGGACTTGGGCC
CGCCAAAGTCATTCTCAGCATTACGCGGCATCGACATTTGCGAGTGTAGC
ATCGCTGAGCAGCAGCTTGGAGACGTTGTAGTTAGTACATTGAGTGGGTC
TTTGAGCGGACGAGAAGGAGCTTCCACTGGGCGGACAATCATGTGCTGCA
GACCGGATCGCTTTGAAAAAATCATCGATTCGTCTCACCAGCTGTGGGGA
TCGCGTACGATGATGGCATTTGACTTCAACCAGTACACATTACACCGATG
AGAACAGTGATGACGGAGTTTCAGTCACACTAGTTCCCTATCATTACATT
AACACCCGTGCGTTTTATGATAATCTGCAGCCGCTGATCAAGGAGATGCT
GAAAAGGATGCAGTGGAACCCTAAGCCTAATCTAGTAAGTATGTTGCGAA
GACTTTACGTGGCATTAAACTGTCCATAGAAGATTCACACGCAATTTATG
TGATTGTTTCACCGCTTTTGTGACCGTACCAAAACCAACCCTACTATGAC
GAGAAAAGGTACGAGGAGTCCGTCTTCTCGGCGGCGGGTGGACAATTTAT
ACGTAGGATTCTTATATTTTAAATTTAAAGCTGTCAAGCTATGTGGAATG
TGGAAAGTGGTGAAGGACGCTGACGTATTGAGACATGAAGCGCCTTCCCT
GAATTCGAGAGATAAATGCACAATTACGCATCGAGTTGTATGAGGAGTTG
TCTTTTCGGTGTCGAGGCCGGTCGATAAAAAACATGTGGGCTTCTTTTGT
CCCAAATTGAAGGAATTTATTAAAAAAAACTCGGAACTTTGATCAAAACG
CTCCAAACAGCGCCTTACGATTTGTGTGAGAGCGACATGTAGTAGAAGGA
AAATAGGAATGGGTGTATGCGATGACTCGATATTGGAGAGATTTATTCCC
TTTCGCGAGGTAGGCACAGCCTATTTGTGGCATGGGAACTAAGCTGTGAC
AATTATGCGGACGTTATTGCATACGAAATATAACCGAAAAATACTCGCGA
AGTATGGAAACTTGGAGCAAGCAGCATTTGGTGGAGACAGGAAGCTTTGT
GATGACTTAGAGTTGAAGGACGCTGACGCATTGACACATGAAGCGCCTCC
CTTGATTTTATTAAAAGATGAACGCACCATAGAAGTTTTAATAGCATTTC
AGGCTCAACCTGAAGGGGCAGCGCACAATTTCGTCTGCTTAAAAGCGAGC
TCACTGGTCTGTGAAGCGCCGATATTTAGGAGCAGGTAGTGACTTGAATT
ATCTTATCTTTAAGTAATAACGTCTATTAATAACGTCATCTATTGTAGGG
CATGAAACGCCTTTAGAGGGGTGGAAAAGGATCACAGAAGTTCACATATA
TGAACAATCTATCGAGATGTGAAGTGGACGCAAGAAAAAAAAACGGGTTA
TGGCTCTTAAAAAAAGTTTCACGGACTCGCCTTTCCCAAACTGACGGGCG
CAACATCGGCATAATGTAGTGTCATTCTCTTATCGTCTCCTGATTCTGGA
ATTATCATACTAAGAAACAAGGATATTCCATGGTTGATTTCT back to topprotein sequence of rna378 >rna378-protein ID=rna378-protein|Name=rna378|organism=Nannochloropsis gaditana|type=polypeptide|length=1297bp
MDANDHIKCFTHFTCEFSLPSDLSDESHSLRGDIVPDVATEAFHGVETGG
EGSSMKNQNTQLMQSGDQSNLMDMRHGPLTGSPDVKVFFPALSSAVNDGN
KPQQEQYNTCSRHFPRPDKIYQWQEPNTCPTAGSGSTSPEASSSTSPQRQ
GTKMDVNPDVALYSSSSSSSSFASSPSTSATSPASRAQAPVALPASSSVL
LGSSPFHPQHSATARRDDGPINAGVVQCPLTATTAARPATGTNTNGVAEM
DLPGQDLLPPQTFWESRSPTWMSRKTAPASSFVKQAAAPNSSCSMPSSSS
CASSSSSSSSSSSTSPTLEGLLTLKQTSASGQERRELVATDASIFSSSLS
SNAPPCHVTQAFEITSEPGYNPSQLQETPSNYRWALNSHGNSRLHHSAWQ
TGTLEARGAGTICFPGSNAHVLALEKNPIDRHGPRGSRITTDATSPFDVV
TLEAKNGIAVGKCASRDTPLSTASREMNRQHSQKQRHRQRQPRQNCHQHA
LTQDHVDYLPIRENLKGKRSGHASMTMPDGNRQVRKPFQEDPLVSASESQ
EIDPSSWNSVKQAQSSSPYESLPLQYPLRENDLLTGPSLSPVFRFLPNEV
LDGTPTTQAQQRLKRQEDEEESEGFIHYSRTMSSKPVPSVSTQGLCRSTN
SCASAFKSFANAGDEEGAEEAFCQLKNQNGRPGVYLYNALLSTYASNGNS
EGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAER
VLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRMQQSQQLEPTV
TTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGN
WEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQ
GLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVIN
SYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAK
DGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMT
DDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHGVEPNITTFSSV
INAYANKGHWVGAESVLSRLEVKGLEPDVITHNSMLKVYVNARDVDGCGR
GLDLVRRLLEGRRHKPTHVTFKTLFTLLLKHPDPRKLQTAMKLLDDHVPA
RSRTSLVYAPLIELCGATGRADAAVRYFEEARRGGHLDKYVVRAARAAGM
IVGGSCGIGDNGVRGRGRTWARQSHSQHYAASTFASVASLSSSLETL back to topmRNA from alignment at CM002455.1:922682..928651+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna378 ID=rna378|Name=rna378|organism=Nannochloropsis gaditana|type=mRNA|length=5970bp|location=Sequence derived from alignment at CM002455.1:922682..928651+ (Nannochloropsis gaditana)
GTCAAGCACTTCTTTACTGTACTCACATGCTTTATTGTCGATGCTGAGGA
TTGCCTTTGGCCAATTCTTTCCGTAAAGTCGAAAAGGTTGTGGCTCGCGG
GAGCGGACAATCGGGTCCACGTACTCACACATTTACTTTTCCTATTTTTT
GGTGCAGGCGCACAATCCAACCACAAGGACATGTTCAGTATATAGAAATA
ATAGAAAGATACTTCACACAAAGTGGCCTATCATTCACGGGGAAAAGCCA
GAGCCAGGCCGCTAGGTAGGTAAAAACACTGAAAGCTGGATACGCGCCAG
GCGAATATGAGATGCTTTGTCGCAATAAAATGATAACAATCCATGGGCAT
TTTGACGATTTCCCTTTTATACTTTTCAAAATGCAAAGAGATCACTCAGA
GTGTCTGgactgccctccttgtgcgCAAACTTGCTCCCGAATATGTACTG
ATTTTCCGATTCGAATTCGCCTTCTGGCGCATGCGCTCACAGACCATACC
TGCTAGTATCGTTATCATGGACGCCAACGACCATATTAAATGTTTCACAC
ACTTTACTTGTGAGTTTTCTTTACCTTCCGATCTTTCGGACGAGAGTCAC
TCCCTTCGAGGAGATATTGTACCGGATGTGGCCACAGAGGCATTCCATGG
TGAGCGATACCTCGTTCTTTCCACTTTAATAGCATGTGCATCTTCTACGC
ATACACTGTGACTTACAAAAATCACTCATATTTTCTCCCGCTTATTAGGA
GTTgagacaggaggagagggcagcagCATGAAGAATCAAAATACGCAATT
GATGCAATCCGGAGATCAAAGCAATCTGATGGACATGCGACATGGCCCCC
TGACGGGATCGCCCGATGTAAAAGTATTCTTTCCTGCTTTATCGTCAGCC
GTCAATGATGGAAATAAGCCTCAACAGGAGCAGTATAACACGtgttcgcg
ccatttccccCGTCCTGATAAGATATACCAGTGGCAAGAGCCCAACACTT
GTCCCACTGCCGGGTCCGGCTCTACATCTCCGGAAGCATCCTCTTCGACG
AGTCCTCAAAGACAGGGCACTAAGATGGACGTCAACCCGGACGTTGCGCT
TTattcttcatcctcgtcttcgtcctcgttcGCGTCGTCCCCGTCGACGA
GTGCTACGAGCCCCGCGTCTAGAGCTCAGGCTCCTGTGGCCCTTCCTGCA
TCGTCCTCCGTATTATTGggctcttctcctttccatccacaGCATTCAGC
GACAGCAAGAAGGGACGATGGTCCAATCAATGCGGGCGTGGTGCAGTGTC
CGCTGACGGCGACAACTGCCGCACGTCCCGCGACTGGGACGAATACGAAC
GGTGTTGCGGAGATGGATCTTCCAGGGCAAGATTTGCTTCCCCCCCAGAC
ATTTTGGGAATCACGCAGTCCAACTTGGATGAGCCGAAAAACAGCGCCCG
CCTCATCTTTCGTGAAGCAGGCCGCAGCGCCGAACTCCTCGTgttccatg
ccctcctcttcttcatgcgcctcctcctcttcttcctcttcatcgtcttc
ttccacgtcGCCAACCCTTGAGGGCCTATTAACTCTGAAGCAGACAAGTG
CATCgggacaggaaaggagagaacTTGTGGCAACTGACGCCTCTATCTTT
TCGTCGTCTCTCTCATCCAATGCGCCGCCATGCCACGTGACCCAAGCCTT
TGAAATTACCTCTGAGCCTGGGTACAACCCATCTCAACTTCAAGAGACGC
CGTCAAACTACCGTTGGGCCTTAAACAGCCACGGGAACTCGAGACTCCAT
CACTCCGCCTGGCAGACAGGAACCTTGGAGGCGCGAGGTGCCGGTACAAT
CTGTTTTCCTGGGAGTAATGCGCACGTGCTTGCCCTCGAGAAAAATCCTA
TAGATAGACACGGGCCTCGAGGAAGTAGAATCACTACTGATGCGACGTCT
CCCTTTGACGTGGTCACCTTGGAGGCCAAAAATGGAATTGCGGTAGGAAA
ATGTGCTTCCCGCGACACTCCACTTAGCACCGCTTCTCGAGAAATGAACC
GTCAGCATTCGCAAAAGCAGCGTCATCGGCAGCGCCAGCCCCGACAAAAT
TGCCACCAGCACGCCTTGACGCAAGATCATGTCGATTATCTGCCAATTCG
CGAGAAtctgaaagggaagagatcCGGGCATGCGTCTATGACAATGCCGG
ACGGTAACCGACAAGTTCGTAAGCCTTTCCAGGAGGATCCTCTAGTCTCG
GCCTCGGAATCACAAGAAATTGATCCCAGTTCGTGGAACTCGGTCAAGCA
GGCCCAATCCTCATCGCCATATGAATCGCTTCCCCTGCAGTATCCCTTAC
GGGAGAATGACTTGCTCACGGGCCCTTCACTGTCTCCTGTTTTCCGATTT
CTGCCGAATGAGGTATTAGATGGCACGCCCACCACACAAGCACAACAGCG
TCtgaaaaggcaggaggatgaagaagagtcTGAGGGTTTCATCCATTATT
CACGAACGATGTCTTCGAAACCTGTGCCTTCCGTCAGCACACAGGGTTTG
TGCCGGAGTACAAATAGCTGCGCCTCTGCATTCAAATCATTTGCAAACGC
TGGagatgaggaaggggcggaagaaGCTTTCTGCCAGCTAAAAAATCAGA
ATGGTAGACCAGGCGTGTATTTATACAACGCTTTGTTGAGCACTTATGCT
TCCAATGGCAATTCTGAAGGCGCAGAAGCGGTACTAAATGGCATGAAAGA
TGACGAAGCAGAATTCGGATTTGGGCCAGAAAAGGCAGTGGAGCCAAATG
TAGTGACGTATTCTTCTCTCATGACCGCCTATGCGATTAAAGGCCATAGC
GAGGGTGCTGAACGTGTTCTCGCGCGCATGCAGGTAGCCGGTATGCAGCC
CAATCTTGTCACTTACAACAGCCTCGCGACGGCATACGCTAAAGGCGGGA
ATTGGCAAGGTGCAAACCAGGTGCTCAAGCGCATGCAGCAGAGCCAGCAA
CTTGAGCCAACTGTTACGACTTATAATGCTGTCCTCAATGCACATGCGAA
CAAGGGTCACTGGAAAGGCGCGGAAGAAGTTGTTCAACATATGAACGAGA
GCAATGTGCAGCCGAATACTACAACTTACAACACGTTAATAGATGCCTAT
GCGAACAAAGGGAATTGGGAGGGTGCCGAGGATGTACTGCGACGCATGAA
CAAGCTGAACGAAGTTGAACCCAACGTGATATCCTTCTCGTCTGTGATAA
ACGCATACGCCCACCGGGGAAACTGGCATGGTGCTGAGAATGTGCTACGC
CGGATGCAATATCAAGGCTTGCAACCAAATTTGATCACCTACAATAGTCT
GGTCACCGCTTACGCCAAGGAGGGCCACTGGCAAGGTGCTGAGGATGTGT
TGCGCCGGATGCATGCAAACCCGCATGTAGAACCCAATACGACAACTTAC
AATTTGGTCATCAACAGCTATGCAAATAAAGGTCATTGGAAAGGAGCGGA
AGACGTCCTCCAGCGCATGCTCACGGTAGGACATTCTCTTGGATCAGGAG
GCAGCGGCAGTGCCATTGCGCCAACTGTCATGACGTACAATTCGCTGATC
AATGCGCACGCCAAAGATGGAAACTGGAAAGGCGCAGAGGACGTCCTTCG
ACGCCTTTTGGAGAGAGGAGTAGAGCCAAACGTCACAACCTTTAATTCGG
TGATTAAGGCGTACACAAAGGAGGGCCACATCGAAGGTGTAGAGAATGTC
CTGACTCGCATGACGGATGACTTCGGGTTAAAAGCAAATGTGACGACCTG
GTCATCAATCATTAATGCGTACGCGACACGTGGTGACTTTGTCGGGGCTG
AGGACGTACTCCGACGGATGCAGGAGCACGGAGTGGAGCCGAACATTAcg
accttttcctccgtcatAAATGCCTACGCCAATAAAGGCCATTGGGTTGG
TGCTGAGAGTGTTTTGAGTCGGCTGGAGGTAAAGGGTCTAGAGCCAGATG
TGATCACTCACAACAGCATGCTGAAGGTATATGTCAACGCCCGTGACGTG
GACGGATGCGGAAGAGGACTGGATTTAGTGCGTCGTTTGCTCGAAGGCCG
TCGACATAAGCCCACCCATGTGACCTTCAAGACCTTGTTTACGCTACTTC
TTAAGCATCCTGACCCACGCAAGCTACAGACAGCTATGAAACTGCTTGAT
GACCACGTACCCGCACGTTCCCGTACTTCACTTGTATATGCTCCGTTAAT
TGAATTGTGTGGAGCCACCGGCCGCGCAGACGCAGCGGTACGCTATTTTG
AAGAGGCACGTCGCGGGGGCCACTTGGACAAGTATGTGGTGCGTGCGGCG
AGGGCTGCTGGAATGATCGTCGGAGGCTCTTGTGGGATTGGTGATAATGG
TGTTAGGGGCCGAGGACGGACTTGGGCCCGCCAAAGTCATTCTCAGCATT
ACGCGGCATCGACATTTGCGAGTGTAGCATCGCTGAGCAGCAGCTTGGAG
ACGTTGTAGTTAGTACATTGAGTGGGTCTTTGagcggacgagaaggagct
tCCACTGGGCGGACAATCATGTGCTGCAGACCGGATCGCTTTGAAAAAAT
CATCGATTCGTCTCACCAGCTGTGGGGATCGCGTACGATGATGGCATTTG
ACTTCAACCAGTACACATTACACCGATGAGAACAGTGATGACGGAGTTTC
AGTCACACTAGTTCCCTATCATTACATTAACACCCGTGCGTTTTATGATA
ATCTGCAGCCGCTGATCAAGGAGATGCTGAAAAGGATGCAGTGGAACCCT
AAGCCTAATCTAGTAAGTATGTTGCGAAGACTTTACGTGGCATTAAACTG
TCCATAGAAGATTCACACGCAATTTATGTGATTGTTTCACCGCTTTTGTG
ACCGTACCAAAACCAACCCTACTATGACGAGAAAAGGTACGAGGAGTCCG
TCTTCTCGGCGGCGGGTGGACAATTTATACGTAGGATTCTTATATTTTAA
ATTTAAAGCTGTCAAGCTATGTGGAATGTGGAAAGTGGTGAAGGACGCTG
ACGTATTGAGACATGAAGCGCCTTCCCTGAATTCGAGAGATAAATGCACA
ATTACGCATCGAGTTGTATGAGGAGTTGTCTTTTCGGTGTCGAGGCCGGT
CGATAAAAAACATGTGGGCTTCTTTTGTCCCAAATTGAAGGAATTTATTA
AAAAAAACTCGGAACTTTGATCAAAACGCTCCAAACAGCGCCTTACGATT
TGTGTGAGAGCGACATGTAGTAGAAGGAAAATAGGAATGGGTGTATGCGA
TGACTCGATATTGGAGAGATTTATTCCCTTTCGCGAGGTAGGCACAGCCT
ATTTGTGGCATGGGAACTAAGCTGTGACAATTATGCGGACGTTATTGCAT
ACGAAATATAACCGAAAAATACTCGCGAAGTATGGAAACTTGGAGCAAGC
AGCATTTGGTGGAGACAGGAAGCTTTGTGATGACTTAGAGTTGAAGGACG
CTGACGCATTGACACATGAAGCGCCTCCCTTGATTTTATTAAAAGATGAA
CGCACCATAGAAGTTTTAATAGCATTTCAGGCTCAACCTGAAGGGGCAGC
GCACAATTTCGTCTGCTTAAAAGCGAGCTCACTGGTCTGTGAAGCGCCGA
TATTTAGGAGCAGGTAGTGACTTGAATTATCTTATCTTTAAGTAATAACG
TCTATTAATAACGTCATCTATTGTAGGGCATGAAACGCCTTTAgaggggt
ggaaaaggatCACAGAAGTTCACATATATGAACAATCTATCGAGATGTGA
AGTGGAcgcaagaaaaaaaaacgGGTTATGGCTCTTAAAAAAAGTTTCAC
GGACTCGCCTTTCCCAAACTGACGGGCGCAACATCGGCATAATGTAGTGT
CATTCTCTTATCGTCTCCTGATTCTGGAATTATCATACTAAGAAACAAGG
ATATTCCATGGTTGATTTCT back to topCoding sequence (CDS) from alignment at CM002455.1:922682..928651+ >rna378 ID=rna378|Name=rna378|organism=Nannochloropsis gaditana|type=CDS|length=7788bp|location=Sequence derived from alignment at CM002455.1:922682..928651+ (Nannochloropsis gaditana)
ATGGACGCCAACGACCATATTAAATGTTTCACACACTTTACTTGTGAGTT
TTCTTTACCTTCCGATCTTTCGGACGAGAGTCACTCCCTTCGAGGAGATA
TTGTACCGGATGTGGCCACAGAGGCATTCCATGGAGTTgagacaggagga
gagggcagcagCATGAAGAATCAAAATACGCAATTGATGCAATCCGGAGA
TCAAAGCAATCTGATGGACATGCGACATGGCCCCCTGACGGGATCGCCCG
ATGTAAAAGTATTCTTTCCTGCTTTATCGTCAGCCGTCAATGATGGAAAT
AAGCCTCAACAGGAGCAGTATAACACGtgttcgcgccatttccccCGTCC
TGATAAGATATACCAGTGGCAAGAGCCCAACACTTGTCCCACTGCCGGGT
CCGGCTCTACATCTCCGGAAGCATCCTCTTCGACGAGTCCTCAAAGACAG
GGCACTAAGATGGACGTCAACCCGGACGTTGCGCTTTattcttcatcctc
gtcttcgtcctcgttcGCGTCGTCCCCGTCGACGAGTGCTACGAGCCCCG
CGTCTAGAGCTCAGGCTCCTGTGGCCCTTCCTGCATCGTCCTCCGTATTA
TTGggctcttctcctttccatccacaGCATTCAGCGACAGCAAGAAGGGA
CGATGGTCCAATCAATGCGGGCGTGGTGCAGTGTCCGCTGACGGCGACAA
CTGCCGCACGTCCCGCGACTGGGACGAATACGAACGGTGTTGCGGAGATG
GATCTTCCAGGGCAAGATTTGCTTCCCCCCCAGACATTTTGGGAATCACG
CAGTCCAACTTGGATGAGCCGAAAAACAGCGCCCGCCTCATCTTTCGTGA
AGCAGGCCGCAGCGCCGAACTCCTCGTgttccatgccctcctcttcttca
tgcgcctcctcctcttcttcctcttcatcgtcttcttccacgtcGCCAAC
CCTTGAGGGCCTATTAACTCTGAAGCAGACAAGTGCATCgggacaggaaa
ggagagaacTTGTGGCAACTGACGCCTCTATCTTTTCGTCGTCTCTCTCA
TCCAATGCGCCGCCATGCCACGTGACCCAAGCCTTTGAAATTACCTCTGA
GCCTGGGTACAACCCATCTCAACTTCAAGAGACGCCGTCAAACTACCGTT
GGGCCTTAAACAGCCACGGGAACTCGAGACTCCATCACTCCGCCTGGCAG
ACAGGAACCTTGGAGGCGCGAGGTGCCGGTACAATCTGTTTTCCTGGGAG
TAATGCGCACGTGCTTGCCCTCGAGAAAAATCCTATAGATAGACACGGGC
CTCGAGGAAGTAGAATCACTACTGATGCGACGTCTCCCTTTGACGTGGTC
ACCTTGGAGGCCAAAAATGGAATTGCGGTAGGAAAATGTGCTTCCCGCGA
CACTCCACTTAGCACCGCTTCTCGAGAAATGAACCGTCAGCATTCGCAAA
AGCAGCGTCATCGGCAGCGCCAGCCCCGACAAAATTGCCACCAGCACGCC
TTGACGCAAGATCATGTCGATTATCTGCCAATTCGCGAGAAtctgaaagg
gaagagatcCGGGCATGCGTCTATGACAATGCCGGACGGTAACCGACAAG
TTCGTAAGCCTTTCCAGGAGGATCCTCTAGTCTCGGCCTCGGAATCACAA
GAAATTGATCCCAGTTCGTGGAACTCGGTCAAGCAGGCCCAATCCTCATC
GCCATATGAATCGCTTCCCCTGCAGTATCCCTTACGGGAGAATGACTTGC
TCACGGGCCCTTCACTGTCTCCTGTTTTCCGATTTCTGCCGAATGAGGTA
TTAGATGGCACGCCCACCACACAAGCACAACAGCGTCtgaaaaggcagga
ggatgaagaagagtcTGAGGGTTTCATCCATTATTCACGAACGATGTCTT
CGAAACCTGTGCCTTCCGTCAGCACACAGGGTTTGTGCCGGAGTACAAAT
AGCTGCGCCTCTGCATTCAAATCATTTGCAAACGCTGGagatgaggaagg
ggcggaagaaGCTTTCTGCCAGCTAAAAAATCAGAATGGTAGACCAGGCG
TGTATTTATACAACGCTTTGTTGAGCACTTATGCTTCCAATGGCAATTCT
GAAGGCGCAGAAGCGGTACTAAATGGCATGAAAGATGACGAAGCAGAATT
CGGATTTGGGCCAGAAAAGGCAGTGGAGCCAAATGTAGTGACGTATTCTT
CTCTCATGACCGCCTATGCGATTAAAGGCCATAGCGAGGGTGCTGAACGT
GTTCTCGCGCGCATGCAGGTAGCCGGTATGCAGCCCAATCTTGTCACTTA
CAACAGCCTCGCGACGGCATACGCTAAAGGCGGGAATTGGCAAGGTGCAA
ACCAGGTGCTCAAGCGCATGCAGCAGAGCCAGCAACTTGAGCCAACTGTT
ACGACTTATAATGCTGTCCTCAATGCACATGCGAACAAGGGTCACTGGAA
AGGCGCGGAAGAAGTTGTTCAACATATGAACGAGAGCAATGTGCAGCCGA
ATACTACAACTTACAACACGTTAATAGATGCCTATGCGAACAAAGGGAAT
TGGGAGGGTGCCGAGGATGTACTGCGACGCATGAACAAGCTGAACGAAGT
TGAACCCAACGTGATATCCTTCTCGTCTGTGATAAACGCATACGCCCACC
GGGGAAACTGGCATGGTGCTGAGAATGTGCTACGCCGGATGCAATATCAA
GGCTTGCAACCAAATTTGATCACCTACAATAGTCTGGTCACCGCTTACGC
CAAGGAGGGCCACTGGCAAGGTGCTGAGGATGTGTTGCGCCGGATGCATG
CAAACCCGCATGTAGAACCCAATACGACAACTTACAATTTGGTCATCAAC
AGCTATGCAAATAAAGGTCATTGGAAAGGAGCGGAAGACGTCCTCCAGCG
CATGCTCACGGTAGGACATTCTCTTGGATCAGGAGGCAGCGGCAGTGCCA
TTGCGCCAACTGTCATGACGTACAATTCGCTGATCAATGCGCACGCCAAA
GATGGAAACTGGAAAGGCGCAGAGGACGTCCTTCGACGCCTTTTGGAGAG
AGGAGTAGAGCCAAACGTCACAACCTTTAATTCGGTGATTAAGGCGTACA
CAAAGGAGGGCCACATCGAAGGTGTAGAGAATGTCCTGACTCGCATGACG
GATGACTTCGGGTTAAAAGCAAATGTGACGACCTGGTCATCAATCATTAA
TGCGTACGCGACACGTGGTGACTTTGTCGGGGCTGAGGACGTACTCCGAC
GGATGCAGGAGCACGGAGTGGAGCCGAACATTAcgaccttttcctccgtc
atAAATGCCTACGCCAATAAAGGCCATTGGGTTGGTGCTGAGAGTGTTTT
GAGTCGGCTGGAGGTAAAGGGTCTAGAGCCAGATGTGATCACTCACAACA
GCATGCTGAAGGTATATGTCAACGCCCGTGACGTGGACGGATGCGGAAGA
GGACTGGATTTAGTGCGTCGTTTGCTCGAAGGCCGTCGACATAAGCCCAC
CCATGTGACCTTCAAGACCTTGTTTACGCTACTTCTTAAGCATCCTGACC
CACGCAAGCTACAGACAGCTATGAAACTGCTTGATGACCACGTACCCGCA
CGTTCCCGTACTTCACTTGTATATGCTCCGTTAATTGAATTGTGTGGAGC
CACCGGCCGCGCAGACGCAGCGGTACGCTATTTTGAAGAGGCACGTCGCG
GGGGCCACTTGGACAAGTATGTGGTGCGTGCGGCGAGGGCTGCTGGAATG
ATCGTCGGAGGCTCTTGTGGGATTGGTGATAATGGTGTTAGGGGCCGAGG
ACGGACTTGGGCCCGCCAAAGTCATTCTCAGCATTACGCGGCATCGACAT
TTGCGAGTGTAGCATCGCTGAGCAGCAGCTTGGAGACGTTGTAGATGGAC
GCCAACGACCATATTAAATGTTTCACACACTTTACTTGTGAGTTTTCTTT
ACCTTCCGATCTTTCGGACGAGAGTCACTCCCTTCGAGGAGATATTGTAC
CGGATGTGGCCACAGAGGCATTCCATGGAGTTgagacaggaggagagggc
agcagCATGAAGAATCAAAATACGCAATTGATGCAATCCGGAGATCAAAG
CAATCTGATGGACATGCGACATGGCCCCCTGACGGGATCGCCCGATGTAA
AAGTATTCTTTCCTGCTTTATCGTCAGCCGTCAATGATGGAAATAAGCCT
CAACAGGAGCAGTATAACACGtgttcgcgccatttccccCGTCCTGATAA
GATATACCAGTGGCAAGAGCCCAACACTTGTCCCACTGCCGGGTCCGGCT
CTACATCTCCGGAAGCATCCTCTTCGACGAGTCCTCAAAGACAGGGCACT
AAGATGGACGTCAACCCGGACGTTGCGCTTTattcttcatcctcgtcttc
gtcctcgttcGCGTCGTCCCCGTCGACGAGTGCTACGAGCCCCGCGTCTA
GAGCTCAGGCTCCTGTGGCCCTTCCTGCATCGTCCTCCGTATTATTGggc
tcttctcctttccatccacaGCATTCAGCGACAGCAAGAAGGGACGATGG
TCCAATCAATGCGGGCGTGGTGCAGTGTCCGCTGACGGCGACAACTGCCG
CACGTCCCGCGACTGGGACGAATACGAACGGTGTTGCGGAGATGGATCTT
CCAGGGCAAGATTTGCTTCCCCCCCAGACATTTTGGGAATCACGCAGTCC
AACTTGGATGAGCCGAAAAACAGCGCCCGCCTCATCTTTCGTGAAGCAGG
CCGCAGCGCCGAACTCCTCGTgttccatgccctcctcttcttcatgcgcc
tcctcctcttcttcctcttcatcgtcttcttccacgtcGCCAACCCTTGA
GGGCCTATTAACTCTGAAGCAGACAAGTGCATCgggacaggaaaggagag
aacTTGTGGCAACTGACGCCTCTATCTTTTCGTCGTCTCTCTCATCCAAT
GCGCCGCCATGCCACGTGACCCAAGCCTTTGAAATTACCTCTGAGCCTGG
GTACAACCCATCTCAACTTCAAGAGACGCCGTCAAACTACCGTTGGGCCT
TAAACAGCCACGGGAACTCGAGACTCCATCACTCCGCCTGGCAGACAGGA
ACCTTGGAGGCGCGAGGTGCCGGTACAATCTGTTTTCCTGGGAGTAATGC
GCACGTGCTTGCCCTCGAGAAAAATCCTATAGATAGACACGGGCCTCGAG
GAAGTAGAATCACTACTGATGCGACGTCTCCCTTTGACGTGGTCACCTTG
GAGGCCAAAAATGGAATTGCGGTAGGAAAATGTGCTTCCCGCGACACTCC
ACTTAGCACCGCTTCTCGAGAAATGAACCGTCAGCATTCGCAAAAGCAGC
GTCATCGGCAGCGCCAGCCCCGACAAAATTGCCACCAGCACGCCTTGACG
CAAGATCATGTCGATTATCTGCCAATTCGCGAGAAtctgaaagggaagag
atcCGGGCATGCGTCTATGACAATGCCGGACGGTAACCGACAAGTTCGTA
AGCCTTTCCAGGAGGATCCTCTAGTCTCGGCCTCGGAATCACAAGAAATT
GATCCCAGTTCGTGGAACTCGGTCAAGCAGGCCCAATCCTCATCGCCATA
TGAATCGCTTCCCCTGCAGTATCCCTTACGGGAGAATGACTTGCTCACGG
GCCCTTCACTGTCTCCTGTTTTCCGATTTCTGCCGAATGAGGTATTAGAT
GGCACGCCCACCACACAAGCACAACAGCGTCtgaaaaggcaggaggatga
agaagagtcTGAGGGTTTCATCCATTATTCACGAACGATGTCTTCGAAAC
CTGTGCCTTCCGTCAGCACACAGGGTTTGTGCCGGAGTACAAATAGCTGC
GCCTCTGCATTCAAATCATTTGCAAACGCTGGagatgaggaaggggcgga
agaaGCTTTCTGCCAGCTAAAAAATCAGAATGGTAGACCAGGCGTGTATT
TATACAACGCTTTGTTGAGCACTTATGCTTCCAATGGCAATTCTGAAGGC
GCAGAAGCGGTACTAAATGGCATGAAAGATGACGAAGCAGAATTCGGATT
TGGGCCAGAAAAGGCAGTGGAGCCAAATGTAGTGACGTATTCTTCTCTCA
TGACCGCCTATGCGATTAAAGGCCATAGCGAGGGTGCTGAACGTGTTCTC
GCGCGCATGCAGGTAGCCGGTATGCAGCCCAATCTTGTCACTTACAACAG
CCTCGCGACGGCATACGCTAAAGGCGGGAATTGGCAAGGTGCAAACCAGG
TGCTCAAGCGCATGCAGCAGAGCCAGCAACTTGAGCCAACTGTTACGACT
TATAATGCTGTCCTCAATGCACATGCGAACAAGGGTCACTGGAAAGGCGC
GGAAGAAGTTGTTCAACATATGAACGAGAGCAATGTGCAGCCGAATACTA
CAACTTACAACACGTTAATAGATGCCTATGCGAACAAAGGGAATTGGGAG
GGTGCCGAGGATGTACTGCGACGCATGAACAAGCTGAACGAAGTTGAACC
CAACGTGATATCCTTCTCGTCTGTGATAAACGCATACGCCCACCGGGGAA
ACTGGCATGGTGCTGAGAATGTGCTACGCCGGATGCAATATCAAGGCTTG
CAACCAAATTTGATCACCTACAATAGTCTGGTCACCGCTTACGCCAAGGA
GGGCCACTGGCAAGGTGCTGAGGATGTGTTGCGCCGGATGCATGCAAACC
CGCATGTAGAACCCAATACGACAACTTACAATTTGGTCATCAACAGCTAT
GCAAATAAAGGTCATTGGAAAGGAGCGGAAGACGTCCTCCAGCGCATGCT
CACGGTAGGACATTCTCTTGGATCAGGAGGCAGCGGCAGTGCCATTGCGC
CAACTGTCATGACGTACAATTCGCTGATCAATGCGCACGCCAAAGATGGA
AACTGGAAAGGCGCAGAGGACGTCCTTCGACGCCTTTTGGAGAGAGGAGT
AGAGCCAAACGTCACAACCTTTAATTCGGTGATTAAGGCGTACACAAAGG
AGGGCCACATCGAAGGTGTAGAGAATGTCCTGACTCGCATGACGGATGAC
TTCGGGTTAAAAGCAAATGTGACGACCTGGTCATCAATCATTAATGCGTA
CGCGACACGTGGTGACTTTGTCGGGGCTGAGGACGTACTCCGACGGATGC
AGGAGCACGGAGTGGAGCCGAACATTAcgaccttttcctccgtcatAAAT
GCCTACGCCAATAAAGGCCATTGGGTTGGTGCTGAGAGTGTTTTGAGTCG
GCTGGAGGTAAAGGGTCTAGAGCCAGATGTGATCACTCACAACAGCATGC
TGAAGGTATATGTCAACGCCCGTGACGTGGACGGATGCGGAAGAGGACTG
GATTTAGTGCGTCGTTTGCTCGAAGGCCGTCGACATAAGCCCACCCATGT
GACCTTCAAGACCTTGTTTACGCTACTTCTTAAGCATCCTGACCCACGCA
AGCTACAGACAGCTATGAAACTGCTTGATGACCACGTACCCGCACGTTCC
CGTACTTCACTTGTATATGCTCCGTTAATTGAATTGTGTGGAGCCACCGG
CCGCGCAGACGCAGCGGTACGCTATTTTGAAGAGGCACGTCGCGGGGGCC
ACTTGGACAAGTATGTGGTGCGTGCGGCGAGGGCTGCTGGAATGATCGTC
GGAGGCTCTTGTGGGATTGGTGATAATGGTGTTAGGGGCCGAGGACGGAC
TTGGGCCCGCCAAAGTCATTCTCAGCATTACGCGGCATCGACATTTGCGA
GTGTAGCATCGCTGAGCAGCAGCTTGGAGACGTTGTAG back to top
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