Naga_100003g111, gene364 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g111
Unique Namegene364
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:922644..928651 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g111
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:922644..928651 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03670NO02G03670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna377rna377-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna378rna378-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna377rna377Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna378rna378Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna377

>rna377-protein ID=rna377-protein|Name=rna377|organism=Nannochloropsis gaditana|type=polypeptide|length=1243bp
MKNQNTQLMQSGDQSNLMDMRHGPLTGSPDVKVFFPALSSAVNDGNKPQQ
EQYNTCSRHFPRPDKIYQWQEPNTCPTAGSGSTSPEASSSTSPQRQGTKM
DVNPDVALYSSSSSSSSFASSPSTSATSPASRAQAPVALPASSSVLLGSS
PFHPQHSATARRDDGPINAGVVQCPLTATTAARPATGTNTNGVAEMDLPG
QDLLPPQTFWESRSPTWMSRKTAPASSFVKQAAAPNSSCSMPSSSSCASS
SSSSSSSSSTSPTLEGLLTLKQTSASGQERRELVATDASIFSSSLSSNAP
PCHVTQAFEITSEPGYNPSQLQETPSNYRWALNSHGNSRLHHSAWQTGTL
EARGAGTICFPGSNAHVLALEKNPIDRHGPRGSRITTDATSPFDVVTLEA
KNGIAVGKCASRDTPLSTASREMNRQHSQKQRHRQRQPRQNCHQHALTQD
HVDYLPIRENLKGKRSGHASMTMPDGNRQVRKPFQEDPLVSASESQEIDP
SSWNSVKQAQSSSPYESLPLQYPLRENDLLTGPSLSPVFRFLPNEVLDGT
PTTQAQQRLKRQEDEEESEGFIHYSRTMSSKPVPSVSTQGLCRSTNSCAS
AFKSFANAGDEEGAEEAFCQLKNQNGRPGVYLYNALLSTYASNGNSEGAE
AVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAERVLAR
MQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRMQQSQQLEPTVTTYN
AVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGNWEGA
EDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQGLQP
NLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVINSYAN
KGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAKDGNW
KGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMTDDFG
LKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHGVEPNITTFSSVINAY
ANKGHWVGAESVLSRLEVKGLEPDVITHNSMLKVYVNARDVDGCGRGLDL
VRRLLEGRRHKPTHVTFKTLFTLLLKHPDPRKLQTAMKLLDDHVPARSRT
SLVYAPLIELCGATGRADAAVRYFEEARRGGHLDKYVVRAARAAGMIVGG
SCGIGDNGVRGRGRTWARQSHSQHYAASTFASVASLSSSLETL
back to top

protein sequence of rna378

>rna378-protein ID=rna378-protein|Name=rna378|organism=Nannochloropsis gaditana|type=polypeptide|length=1297bp
MDANDHIKCFTHFTCEFSLPSDLSDESHSLRGDIVPDVATEAFHGVETGG
EGSSMKNQNTQLMQSGDQSNLMDMRHGPLTGSPDVKVFFPALSSAVNDGN
KPQQEQYNTCSRHFPRPDKIYQWQEPNTCPTAGSGSTSPEASSSTSPQRQ
GTKMDVNPDVALYSSSSSSSSFASSPSTSATSPASRAQAPVALPASSSVL
LGSSPFHPQHSATARRDDGPINAGVVQCPLTATTAARPATGTNTNGVAEM
DLPGQDLLPPQTFWESRSPTWMSRKTAPASSFVKQAAAPNSSCSMPSSSS
CASSSSSSSSSSSTSPTLEGLLTLKQTSASGQERRELVATDASIFSSSLS
SNAPPCHVTQAFEITSEPGYNPSQLQETPSNYRWALNSHGNSRLHHSAWQ
TGTLEARGAGTICFPGSNAHVLALEKNPIDRHGPRGSRITTDATSPFDVV
TLEAKNGIAVGKCASRDTPLSTASREMNRQHSQKQRHRQRQPRQNCHQHA
LTQDHVDYLPIRENLKGKRSGHASMTMPDGNRQVRKPFQEDPLVSASESQ
EIDPSSWNSVKQAQSSSPYESLPLQYPLRENDLLTGPSLSPVFRFLPNEV
LDGTPTTQAQQRLKRQEDEEESEGFIHYSRTMSSKPVPSVSTQGLCRSTN
SCASAFKSFANAGDEEGAEEAFCQLKNQNGRPGVYLYNALLSTYASNGNS
EGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAER
VLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRMQQSQQLEPTV
TTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGN
WEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQ
GLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVIN
SYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAK
DGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMT
DDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHGVEPNITTFSSV
INAYANKGHWVGAESVLSRLEVKGLEPDVITHNSMLKVYVNARDVDGCGR
GLDLVRRLLEGRRHKPTHVTFKTLFTLLLKHPDPRKLQTAMKLLDDHVPA
RSRTSLVYAPLIELCGATGRADAAVRYFEEARRGGHLDKYVVRAARAAGM
IVGGSCGIGDNGVRGRGRTWARQSHSQHYAASTFASVASLSSSLETL
back to top
Synonyms
Publications