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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g113.1786.mrna |
| Orig protein id | gnl|cribi|Naga_100003g113.1786 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:919429..921896 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna376 ID=rna376|Name=rna376|organism=Nannochloropsis gaditana|type=mRNA|length=2447bp
CAAAATGGTAAAACAATCAAAAATCGCGCACTACTTCAAACGTTTGAATG
TGTCTTCGGATGCGAGCACTCATACATATCTTTGGATGCGCTCCCAGTTA
CCCTTTTCGTTATAAATTACCCCAGGAGGTTCGCCGGGTGCGGGACTCTC
TCCATGTCCCCCCTGACATGGCAAAGTGGAGGGTGTTTTTTCTTCTACTA
CTTGGCGTGACTTCCACTCGCAGCTTCCGTTTCTTGCCGGTTAGATCCCC
ATCATCTCCTGCGCTCCTTCCGTCTTGCTGGGCGATCGCATTATCGCGAA
CGACTTTAACGCCTCTTTACTCAGACGCTTTCTTCAATTTTGAAGGCCTT
CAGAAGCGACTGAATTTGACGCATTTCGATGATTCTTCTCAGCATAGCCC
TCCTCCACTGCGCCCCAATCCACAAGAAGATTTCGTAAATCGACCTGATT
TAGTTAAGGCGCGGGAAATTGCTGATAAACTCGCCCCGGAGTTCTCGTCG
CACGACAAGTATCCGACAGTTGTCATCTATTTTCATGTAGCAGCACACCA
CCTGCAAAGCTGGCGAGAGGCTCTATTTTATTTCATTATAGCACAGAAGC
AGATAGAAAGAGATGAGGAGGTATTTTGGGAAGCGTTCCAGCACGTAGGG
CTTCCACCCGAAGTCAAAGACATCAATTATTTAAGTAGGCAAGCAGGGCG
TGTTCCCTCCCGTTCCCGCCTGGCGTTATGCGGGACATTTGCGAACACGA
AGGCAGAAGAGCGGGCAAAGCACGCGCTTTCTCAATGGCGATCTGATCTC
AATGCCCGTTTGATGGCTTATCGCTTACAAGGCGACGATGTAAGAGATGC
TGTGGAGGTCATGCCCATGAGTCAAGCTGTTTACCGACGTATACGGCCTT
CAGGACCCCCGACGCAGCCATCGCAAATCACTTCCTGTTCGATTTCACCA
GAGTCGACATTTCTCCTTTCCTTTTTACAAGCAAGTTGGTCCTCTGAGCG
CAAGATCCGTCGGCATTTGGATCGTCTAGATAAGTATCTGGACGAAGTGA
CAGGGTCTGCTTCTACGCGCGGAGGACCGGCTGAGCGCGCTGAATTGTAC
ATTGATCCCTCCTACCCGAGCGCACATCGGATTTGGCATCAGTTCTCAGA
CAGTAACGCTATGGTGGCATGCTTAAGGAAAGACTACGCAAATTTCTTAG
AGGGTGGCGCTAAATTTCGAGCACGCGTTAATCATGTTGAGCAGGTTTTT
GCGCCGGTTGGATGCGCAATCTCCCAAAAAATGTTTCCACCTACCTTATC
AAGACGGCTTTCATCCTCCTGCTACATGCCCTTGGTGGGTTATGGAACGC
GGGTCTACCGGGGGCGCGAGCGAGAAGGGACGTTGACGTTGCTCGACGCT
GTCCGCACGGCCTTGCGCGCGGGATGCCGACTGCTCGACTGCAGCCCAGA
TTACGGTACTCAGCCTGAAGTCGGAGAAGCATTGCGTCAAATGTTTAAAG
CGCATGAGACACAACGCGAGCGGCTCTTCATAGTGAGCAGTCTGAGCATT
GAAGTAGCGATGAACCATGGTGATGTGTCCGAGACAAACAAAGACATATT
GCTGCATGGAAAGCTATGGAAGTGTTGCTGAGTGAAGGTGTGGTGCGACA
CATAGGCGTCGGAGGCTTTCCCCTGTCTTCATTGAAAGCTCTATGCGAGG
ATCCCACTTTGACATGGCAACCCGCGGTTTGTCAGCTAGAGCATCACCCT
TTTTATCGTCCCGATTCTTTGGTAGAGTTCTGCGGGGAGCGTCACATCCA
ATTACTGGCGAACACCCCACTTGGCCGACCAGCACTCTCTCGGCCACCGG
GCCAAAATCCTCTGAAGGAGCCTTTGATTGAAATGTCGTCTACAGCGCTT
GAATGTAGCCCTGCACAAATTGCTCTGCGATGGGCAGTGCAGCAAGGTGT
GGCTGTTATCCCGAACTCTCTGTGTCGCACTCATATTCTAGAAAATTCTG
ATCTGCATTCTTTCACGTTAGCTCCTTTTCGAATAGAAGTGCTGCACGAA
ATGGCAGCAGTTCGTAACATGAGCTTTACTGACGGTTCTTCTGTCCGGAA
GGGAGAAGAGAGAGCGCCTTATACGTTAGAAGAAATAAGGGCCCATGGAT
TTGTCTATGATGATGGCGGTACCTTGATCGCACCGGGAAACCCATATGAG
TATTTGCAGCTCACAATCGATGTGTTCGAACGATTGGACTTAAGCGATGT
TCCGGAACTGGCTTTAGCGCCCCGAGAGATAGACGGGGCATTCCCAGGCA
TGGATGTTGAGCCGATTGAGTGCGATGAAGAGATCACGAACGAGCAACCA
TGAAAATAAAGAGTTTGCAAACGAACGATGTTACATGCAAATATTGTCAT
TTAGCTTAGGTGAATTTGTGACGTTACTTCTTCATCGTGTACATTCC back to topprotein sequence of rna376 >rna376-protein ID=rna376-protein|Name=rna376|organism=Nannochloropsis gaditana|type=polypeptide|length=363bp
MSVDRTPSPSKGQADTFPQQQVPDKRLSCPLTILRLSQTVSQTISARYIW
ESKGGYCRDKRKTSSPSCAVNVAHVSPAPVEVTRPAITRTFSDSCITPSA
PRMSSSEPNPLFLESLPHLTLPPPSVDDGDARSIGGDRYNDRRALSSSMR
ERMGTLAGGFKLFASPSSSLTVGVGAAGLQAESTQGSQAHTSFLEGLTEK
SPTSRSSMVLSILANKTGAGSVAKKDGLCAPSVQHTGHSAPLPAMQGRTL
VEVAHTTIKGPVAEANIGDAFAKGVMEGPIVCHGVTPSTAATTASSVSIL
DGLKEVEDVFSTISPARSIVSSLSGSQASQNMEEGEEDASEPPSADADVG
PFELEELHFGAEN back to topmRNA from alignment at CM002455.1:919429..921896- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna376 ID=rna376|Name=rna376|organism=Nannochloropsis gaditana|type=mRNA|length=2468bp|location=Sequence derived from alignment at CM002455.1:919429..921896- (Nannochloropsis gaditana)
CATGCTACAATGTGTGAGGGGCCTCAAAGCGAGGAGTTCCCTCGTCGGGA
CAGCTCGGGGGCCTCGATGTCGCCTCTTCTTTCTGGCGCGCGTCCTTTTC
CCTCTGCCTTGAAGAACTCACAGGATGGTGCCCTCTCTCTCATGAAGGCG
TTAGCGTCTCCGCAAAGATCTGACTGCCACCTCTGAACACAACATAACGT
ACAGCACTTCTGTCATACACATCAAATTTATTTTTAAAAAAGATGGCCCT
TGACCTGATGATCGCGTTCACGAGCAGGAGCAGCTCCAAAAATGTCACTA
TCGAGGACATCGACTTGCGGAGTGGCGGAATTCAATTGTGACAGCGGGGC
TACACCTGAAAAGCAGTTGCACAAGTTGCGAGTTCGTGTATAGCAGCATT
CTCTGTGTTTAATTCGCTGTGATAGCGTAACTTTGGGCAGGAAATTCAAA
GCAACCACAGTCCTTCCCTGGACGCGAAGGCTCAAGATTTTCACTGCTGC
CGCCTTGTACTTGAGGGTTGGAAGATAATATCAACATCAACACAAATAGA
AGTATAATTCAGAATTGTGTGTAATTAAGAAGGCAACCCTTGGACAAAAA
CACATCTCTGGCAGTCAAATCAAGCGTTGTCTGCCATACCATGAGCGTGG
ATCGAACTCCTTCTCCGAGTAAGGGGCAGGCGGATACCTTCCCGCAGCAA
CAAGTACCGGACAAGCGTCTATCTTGTCCCCTAACAATCCTTCGTTTGTC
TCAGACAGTTTCGCAGACAATCAGTGCCAGGTATATTTGGGAATCGAAAG
GTGGATACTGTCGCGACAAGCGCAAGACAAGCAGTCCTTCGTGTGCGGTC
AACGTAGCTCATGTGTCACCTGCACCAGTGGAAGTGACACGGCCCGCGAT
TACCAGGACGTTCTCAGACTCATGCATTACCCCCTCCGCGCCTCGCATGT
CTTCGTCGGAGCCTAATCCGCTCTTCCTAGAGAGCCTCCCGCACTTGACC
TTGCCCCCGCCTTCCGTGGATGACGGCGACGCGCGCTCAATTGGCGGCGA
CAGATACAACGATCGACGAGCCCTTTCCTCTTCCATGCGAGAGCGTATGG
GAACACTGGCTGGTGGTTTCAAACTCTTTGCATCGCCTTCAAGTTCCCTC
ACAGTCGGAGTGGGGGCCGCGGGTTTGCAGGCTGAAAGTACTCAGGGGTC
GCAGGCACACACCTCTTTTCTAGAAGGATTAACAGAGAAAAGCCCAACTT
CAAGATCTTCGATGGTGCTTTCGATACTGGCGAATAAAACAGGTGCAGGA
TCAGTTGCAAAAAAGGACGGCCTCTGCGCACCTTCGGTGCAGCACACAGG
CCACTCCGCCCCCTTGCCCGCGATGCAGGGACGGACCCTCGTTGAAGTAG
CACATACTACAATAAAAGGTCCAGTGGCGGAAGCGAACATAGGTGACGCT
TTCGCGAAGGGGGTAATGGAGGGTCCTATTGTGTGCCATGGTGTGACGCC
GTCCACAGCAGCGACAACAGCTTCTTCAGTGTCAATCCTCGACGGTCTCA
AGGAAGTTGAGGACGTTTTTAGCACTATATCGCCTGCTCGCTCGATTGTA
TCTTCTTTGTCAGGATCTCAAGCGTCTCAAAATATGGAGGAAGGGGAAGA
AGATGCCTCAGAGCCGCCGTCGGCAGACGCAGATGTGGGGCCCTTCGAGT
TGGAGGAGCTGCATTTTGGAGCCGAGAATTAGAATAGAAGTATTTCAGGG
AAAGAATGTATTGATGCCGCTTAAAGTTATAAAAGTCACAGTACAAGTAT
TGTCGCCTTTTCGGATGAAGCGCCTTTTGTCGCTGTGGTGGTCCACATTA
GAGGGCTTGGTAAGGAGAGACCTGAAATAGAATTGATGAATTTGACATTG
TGACGGCACAGAGGAGGAGTGCTACATGACATTGTTCGGTATCGAACTCA
CTTGGTAGCGACTTGTCGTGTCTGACTTTTGTGTGCAATTTAAAACGCCT
TCGAAATTGTACGCTATCCCATAAACACGCACAAGTTATAACATAATCCA
TCGAGAGTTGGATTTTTGAACGAGTCATGTCAGCGTACCATCAGCAGGCT
GAACTGGTCAGATACGTCTCTTAAGGCAAAATCGCTTGGGATTGCTGTAA
CTAGAAGCGTTTCAAATATTTCGAAGTACAACGCTCCAATCAAGGTACAT
AAAGGAAATGATGAAATAAATGATCAATTCCAGCTATATCATTTCATATG
ATCTGACAAAAACACATTAGTAACGTCAACATCAGCGTCCTAGTCCACGT
ACAAGTATGTTTCTGCGGGAATATAATCTCGCTCTTTAGCCATGTACAGC
GGAAAGGGTGATGTGCGTGTGAAAACGTTGAAGTGGGAAAAGTCATTATG
GAATGTACACGATGAAGAAGTAACGTCACAAATTCACCTAAGCTAAATGA
CAATATTTGCATGTAACA back to topCoding sequence (CDS) from alignment at CM002455.1:919429..921896- >rna376 ID=rna376|Name=rna376|organism=Nannochloropsis gaditana|type=CDS|length=1092bp|location=Sequence derived from alignment at CM002455.1:919429..921896- (Nannochloropsis gaditana)
ATGAGCGTGGATCGAACTCCTTCTCCGAGTAAGGGGCAGGCGGATACCTT
CCCGCAGCAACAAGTACCGGACAAGCGTCTATCTTGTCCCCTAACAATCC
TTCGTTTGTCTCAGACAGTTTCGCAGACAATCAGTGCCAGGTATATTTGG
GAATCGAAAGGTGGATACTGTCGCGACAAGCGCAAGACAAGCAGTCCTTC
GTGTGCGGTCAACGTAGCTCATGTGTCACCTGCACCAGTGGAAGTGACAC
GGCCCGCGATTACCAGGACGTTCTCAGACTCATGCATTACCCCCTCCGCG
CCTCGCATGTCTTCGTCGGAGCCTAATCCGCTCTTCCTAGAGAGCCTCCC
GCACTTGACCTTGCCCCCGCCTTCCGTGGATGACGGCGACGCGCGCTCAA
TTGGCGGCGACAGATACAACGATCGACGAGCCCTTTCCTCTTCCATGCGA
GAGCGTATGGGAACACTGGCTGGTGGTTTCAAACTCTTTGCATCGCCTTC
AAGTTCCCTCACAGTCGGAGTGGGGGCCGCGGGTTTGCAGGCTGAAAGTA
CTCAGGGGTCGCAGGCACACACCTCTTTTCTAGAAGGATTAACAGAGAAA
AGCCCAACTTCAAGATCTTCGATGGTGCTTTCGATACTGGCGAATAAAAC
AGGTGCAGGATCAGTTGCAAAAAAGGACGGCCTCTGCGCACCTTCGGTGC
AGCACACAGGCCACTCCGCCCCCTTGCCCGCGATGCAGGGACGGACCCTC
GTTGAAGTAGCACATACTACAATAAAAGGTCCAGTGGCGGAAGCGAACAT
AGGTGACGCTTTCGCGAAGGGGGTAATGGAGGGTCCTATTGTGTGCCATG
GTGTGACGCCGTCCACAGCAGCGACAACAGCTTCTTCAGTGTCAATCCTC
GACGGTCTCAAGGAAGTTGAGGACGTTTTTAGCACTATATCGCCTGCTCG
CTCGATTGTATCTTCTTTGTCAGGATCTCAAGCGTCTCAAAATATGGAGG
AAGGGGAAGAAGATGCCTCAGAGCCGCCGTCGGCAGACGCAGATGTGGGG
CCCTTCGAGTTGGAGGAGCTGCATTTTGGAGCCGAGAATTAG back to top
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