EWM30269.1, cds376 (CDS) Nannochloropsis gaditana

Overview
NameEWM30269.1
Unique Namecds376
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:920165..921256 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30269.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g113.1786.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:920165..921256 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30269.1 vs. NCBI_GenBank
Match: gi|585112928|gb|EWM30269.1| (hypothetical protein Naga_100003g113 [Nannochloropsis gaditana])

HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0 
Query:    1 MSVDRTPSPSKGQADTFPQQQVPDKRLSCPLTILRLSQTVSQTISARYIWESKGGYCRDKRKTSSPSCAVNVAHVSPAPVEVTRPAITRTFSDSCITPSAPRMSSSEPNPLFLESLPHLTLPPPSVDDGDARSIGGDRYNDRRALSSSMRERMGTLAGGFKLFASPSSSLTVGVGAAGLQAESTQGSQAHTSFLEGLTEKSPTSRSSMVLSILANKTGAGSVAKKDGLCAPSVQHTGHSAPLPAMQGRTLVEVAHTTIKGPVAEANIGDAFAKGVMEGPIVCHGVTPSTAATTASSVSILDGLKEVEDVFSTISPARSIVSSLSGSQASQNMEEGEEDASEPPSADADVGPFELEELHFGAEN 363
            MSVDRTPSPSKGQADTFPQQQVPDKRLSCPLTILRLSQTVSQTISARYIWESKGGYCRDKRKTSSPSCAVNVAHVSPAPVEVTRPAITRTFSDSCITPSAPRMSSSEPNPLFLESLPHLTLPPPSVDDGDARSIGGDRYNDRRALSSSMRERMGTLAGGFKLFASPSSSLTVGVGAAGLQAESTQGSQAHTSFLEGLTEKSPTSRSSMVLSILANKTGAGSVAKKDGLCAPSVQHTGHSAPLPAMQGRTLVEVAHTTIKGPVAEANIGDAFAKGVMEGPIVCHGVTPSTAATTASSVSILDGLKEVEDVFSTISPARSIVSSLSGSQASQNMEEGEEDASEPPSADADVGPFELEELHFGAEN
Sbjct:    1 MSVDRTPSPSKGQADTFPQQQVPDKRLSCPLTILRLSQTVSQTISARYIWESKGGYCRDKRKTSSPSCAVNVAHVSPAPVEVTRPAITRTFSDSCITPSAPRMSSSEPNPLFLESLPHLTLPPPSVDDGDARSIGGDRYNDRRALSSSMRERMGTLAGGFKLFASPSSSLTVGVGAAGLQAESTQGSQAHTSFLEGLTEKSPTSRSSMVLSILANKTGAGSVAKKDGLCAPSVQHTGHSAPLPAMQGRTLVEVAHTTIKGPVAEANIGDAFAKGVMEGPIVCHGVTPSTAATTASSVSILDGLKEVEDVFSTISPARSIVSSLSGSQASQNMEEGEEDASEPPSADADVGPFELEELHFGAEN 363
The following BLAST results are available for this feature:
BLAST of EWM30269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112928|gb|EWM30269.1|0.000e+0100.00hypothetical protein Naga_100003g113 [Nannochlorop... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna376rna376Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications