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Properties
| Property Name | Value |
|---|
| Product | coatomer protein subunit epsilon |
| Orig transcript id | gnl|cribi|Naga_100791g2.10683.mrna |
| Orig protein id | gnl|cribi|Naga_100791g2.10683 |
| Gene | CPC22 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1148629..1150283 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3756 ID=rna3756|Name=rna3756|organism=Nannochloropsis gaditana|type=mRNA|length=1317bp
ATGGCTCTTCCGGACACTGTCGCTACCATGGCACACGATAGCATGGAGGT
GTCGACGTCCGTCCATGCAAGCGTACAGGATGCGGCTGAGAATTCTACTG
CCGTGACTCCCCTATCGAAAATGAAGGGGGATGCGGAAACAGCAGCCGGT
CCGGCAGCGGCCGTTCCTCCAACAACATCTCAACATACTCCAGGTGGCGC
TTTACAATTGCATTCGGACATGCTCTTAGTGGGCGGGAAACCTGGGCTCT
TCCATTGTAATTATTGCATGCGCGATATCAGCAACACGATACGGATCAAG
TGCGCGGAGGTGTCGACGTGTCCTGATTGGGACCTATGCGTGGATTGTTT
CGGAGCCGGCGTGGAGTTGGGAAAGCACAAGAACGACCATCCCTACCGCG
TCGTCGACAACACCCACTACCCCATCTTCTCGCCCGACTGGACTGCAACG
GAAGAGCTTCTGCTGCTTTCAGCACTTGAGGCGCATGGGATGGGAAACTG
GGGAAAGGTAGCGGAGCTGCTCAACTGCAAGGAAAAAACGGAGAAGGCTT
GCATGGAGCATTATTATGACCTGTACTTGCACTCCTACGGTAGCATACTG
CCGAAGCAGACTCTTGGTGGGGGAGAGACGACGGCCCTGGTCTCGGAGGA
GGAGTATCGGATGCGGCCCTTGGACCTGGCAAGATACCCGGAGGCGGAGG
GAGGGAAGGAGGGGGAGGGAAAGACGGGAAAGGAGAAGGAGGGGGAGGGA
AAGGAAGGTGGTCCGTCGCAAGCCAATGACGCGATCCCCGGCTACATGCC
CCTCCGGGGGGACTTCGACGTGGAGCACGATAACGAGGCCGAGCTCATTT
TGGCAGAGATGGAGATCTTGCCGGATGAGGACCCGGCGGAGAAACAGCTC
AAGCTCATGGTCGTGGACGTCTTCAACCGGAAACTGGATGAGCGAGAGAA
ACGCAAGGCGTTCGTGAAGGAGTACAATCTCATCGACTACAAGGCTCTCC
AGAACAAGGAGAAGCGAAAGCCCAAGGATGAGCGGGAGCTCATTGCCAAA
CTCCGGGTATTCGCCCGCTATCAGACCCCGCAAGAGCACGAGCAGTTTGT
CCTGGGTATTTTGGAGGCCAAGCGACTGCGCAAGCGCATCGAACAGCTCC
AGCAGTACCGGCGTCTTGGCATCCGCACACAGGCCGAAGCCCTGGCGTAT
GAAAACGAGAAGCGGAGACGCGAGCAGGAGCAGCAAATGCGGAAACAGGT
AGAGAGGGCGAGGGGAAGGGATGTGTGCATGAATTGTGATGGGAGGAAGG
AGGGATGGAAGGGGTGA back to topprotein sequence of rna3756 >rna3756-protein ID=rna3756-protein|Name=rna3756|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MEREDFRMQGERTVATPKTDNSLPYLVRSRHSHLPQLIPPGLFSRHFQSA
LQAVRWFAEYEAHPEQREAVVGKFQTSLQETATASCPSLQTMAAIIFLKE
GLVKDALRAVHRGTTLEQ back to topmRNA from alignment at CM002461.1:1148629..1150283+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3756 ID=rna3756|Name=rna3756|organism=Nannochloropsis gaditana|type=mRNA|length=1655bp|location=Sequence derived from alignment at CM002461.1:1148629..1150283+ (Nannochloropsis gaditana)
TTGAGCGATGATGGGTGCCCTGTTCCGTACTTCCCTACATCCCTCGCAAG
GTATTTGCTCATAGAACACAATAACACAGAGGCAAGCTAATATGGCGGAG
CCTGATGATCTCTATACCTTGCGCCAGGAGTTTTACGTGGGTAATTTTCA
GGTAAGGACCACGGGGAGTGAAGAAGACATAAGAAACAGCGGAGAGACTA
CTACAACAGGGAGTAGACCTTGCCAACTTGGCTTGCTATCTTAATGGTCC
TAAATAGCACTTGTAGCATGACTGGAATAGGGAGAGTATTTTTGTCGACT
CCAAATTCCGACTCGTTCAGTTATCGGACGTCGTCAGAACCTGCGAATGT
AACACCGGCCTCCCCGTCTGAAAAGCGGTGTGAATGGCCCGGTTCCTCAT
CTGTATCGCGTGCACTTCGCTCCTATCGTCGTAGCTTTGTATTTTCTTTG
ATCGAAAACAtcaccactccctcctcatgACGACTCTTCATGCCATatct
tcctttccaggccGCTATTAACGAGGGTACCTCCTTAGGGAGAGTGAGCC
CCGACCTTGAAACAGAGAGGGCAGAGTTCGTCTACCGGTAACGAGGGGGA
AATTCAAGTGGGTCGTGGAATGAATGTGAGGTGTGTGTCGCATGTGTGCG
AACGCTGCTGCGATAATTAGAACGGAAGCGAGCGACTGACGATTTAAAAA
CGAGTCTGTGAGATGTCAAGGATAGTTCCAGGACCAGCGTGATGACCCTT
TAAAGGCGAAAAGATTTTGCCGTCCTTAAGAGGAATATTTCTCATCCACC
ACATGGTTGCATTCATCGTGAATGGAGGACAGTGCGCGTTTGGGCCTAAA
GGAGTACGACGTGATTTTTGGcgaagtgaaggagggcggggacacGCCCA
TCGGTAAGGCTcgacggggatggaggggagctCAGGGACTGAATTGGGGA
CCTTGGTGAACATatatggagagggaagactTCAGGATGCAAGGGGAGCG
TACGGTTGCCACCCCAAAAACGGACAATTCCTTGCCTTACCTCGTCCGCT
CCCGGCACTCTCACCTTCCCCAATTGATCCCGCCCGGGcttttttcgcgc
cattttcaATCAGCCCTGCAAGCCGTCCGCTGGTTCGCTGAATACGAGGC
CCACCCCGAGCAGCGTGAGGCCGTCGTCGGAAAATTTCAGGTGCGACGAC
CGAGTAGAGCAAGGGGGCaggcccccccttcccgccgtaaaccgtcgcct
cccctccgttgCACGATCGCCGCGATGCGCGTGGCCCTTCTATGTACTGA
CGGGCCCATTCCCTTGTatgctcgccctccctctttccacctCAGACATC
TCTTCAAGAGACTGCCAcggcctcctgcccctccctccaaaccaTGGCAG
CGATTATCTTCCTTAAAGAGGGACTTGTCAAGGATGCCCTTAGGGCCGTG
CATCGAGGCACCACCCTCGAAcagtaggaaggggggaagaagggagggag
ggcggaagggagggagggagggacctcGGATGTAGGACGTAACTGACAAG
GAGTGGCTTCTCTCACGAGCAGGCGCGCCTTGATGACGGCCATCTACCTG
CGTATGGACCGGCTCGACCACGTaagctccctcttccctcttccttcctc
ttctc back to topCoding sequence (CDS) from alignment at CM002461.1:1148629..1150283+ >rna3756 ID=rna3756|Name=rna3756|organism=Nannochloropsis gaditana|type=CDS|length=714bp|location=Sequence derived from alignment at CM002461.1:1148629..1150283+ (Nannochloropsis gaditana)
atggagagggaagactTCAGGATGCAAGGGGAGCGTACGGTTGCCACCCC
AAAAACGGACAATTCCTTGCCTTACCTCGTCCGCTCCCGGCACTCTCACC
TTCCCCAATTGATCCCGCCCGGGcttttttcgcgccattttcaATCAGCC
CTGCAAGCCGTCCGCTGGTTCGCTGAATACGAGGCCCACCCCGAGCAGCG
TGAGGCCGTCGTCGGAAAATTTCAGACATCTCTTCAAGAGACTGCCAcgg
cctcctgcccctccctccaaaccaTGGCAGCGATTATCTTCCTTAAAGAG
GGACTTGTCAAGGATGCCCTTAGGGCCGTGCATCGAGGCACCACCCTCGA
AcagtagatggagagggaagactTCAGGATGCAAGGGGAGCGTACGGTTG
CCACCCCAAAAACGGACAATTCCTTGCCTTACCTCGTCCGCTCCCGGCAC
TCTCACCTTCCCCAATTGATCCCGCCCGGGcttttttcgcgccattttca
ATCAGCCCTGCAAGCCGTCCGCTGGTTCGCTGAATACGAGGCCCACCCCG
AGCAGCGTGAGGCCGTCGTCGGAAAATTTCAGACATCTCTTCAAGAGACT
GCCAcggcctcctgcccctccctccaaaccaTGGCAGCGATTATCTTCCT
TAAAGAGGGACTTGTCAAGGATGCCCTTAGGGCCGTGCATCGAGGCACCA
CCCTCGAAcagtag back to top
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