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Properties
| Property Name | Value |
|---|
| Product | Actin cross-linking |
| Orig transcript id | gnl|cribi|Naga_101115g1.7777.mrna |
| Orig protein id | gnl|cribi|Naga_101115g1.7777 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1117918..1119107 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3748 ID=rna3748|Name=rna3748|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp
GAGAGAGGGCATAAACTTCCTGAGTCTTCAGCGGACAGAAGAGGTGGGAG
AAGGAATGACCTCGAAAAAGCGATGCTTGTAGAGAGTCATCAAAGGTCGT
TTGGTGTCATTCCGCATCGATTTGTCAGCTTAAATGTACAGTGGTGCGTT
TGTGGACCGCGTTATGCACGGTAATGAGCAAATTTTGGAACGAGGGAGGG
CGGCGGGAAGTCTATCGTAAGAAGCACGCTCTATTGGCTATCTCATGCAT
CGTACAACACATGAAGAAGTGCGGTTTCCCGGGGACGTAATTGTTTCTTG
GGTCCTCTTTTTTTTTAGCGCATCGGGGAAAAATCTATCCATGTCACTCG
AGAAGAATTTGGTCAGATACATGAACAGGCGGGCAATCGTCTTCACACCA
GCGTAGCATGTCCCTCTTTGTCATCGTAGGCAAAAATGAACCCATTTTCG
AGGCAGATTTCTCGACATCTTCCACCTCGACGGGAGCCAGCCCCAATAAA
GTCTCGGCCGCGGAGGAAGGCAACGCGCAGTTGAACCAATTCATCCTGCA
TTCGTCCTTGGACATGCTGGAAAAAGCCATGTGGTCGTCTCCGTACATGA
ATCTGCGGGCCATCGACCGTTTCAACGGGCACATCGTCCACGCCTTCCTC
ACAGCGGGGGGCACGGCCTTCCTCCTCCTCCACGACGGAAACCGGGGGGA
GGAGTCTCTCGTCGGCTTTTTCAAGGACGTGTACGAATTGTACGTCAAAT
TGTTGATGAACCCGTTCTGTGAGATGGACAGGCCCATTGTTAGCAGCAGC
TTTGAAGCGCGGGTACGGGTCTTGGAAAAACGTTGGTTGAGATGATGAGA
TGGGAAGGGAGGCCGGGCACCCCGTCGCCGGGAATGTAGAAAGCGGGAGG
GAGGAAGACGAGATGGGGGAATGTAAAAAGGAAAAAGCCATGACATCCAC
CTGTACGCACGCATCCGACGTGGCTCTAAAAAGGCATAAGCCAAGAGCGT
GCGCCAAAGGATTGGATCGGTCACTCCTGTATGATTCCATACAATTACAT
CTCATGCCTGTGCCTCGGCGCCGTCATCCCCTGCCCGCCCTCCGTCCCTC
CTACCCCTCGCCCTGCTCAAATCACCAAGCTGTCCGCACGCCCCCATTTC
CTCCGCACCCTTCGACTCGCGGACGGTGGAGAGACGCCCGTGGTCCTTCA
AAATGCGTCGAAAGGATCGGATCGCGTCCGGGGAGGCAGGCAGAAAGTTT
GCGCCTGCCGAGGGAGGGAGGGAGGGAGGAAGGGGGGGTGAGAACATTGC
TTGGAGGGGTCAAAGCAATGATGTCCCTCCTCAGCCCTCTTCCCCCCCTC
CTTGCCCCGAACCTTCATGCGAGTTGAAGTGGATGAGGTTGATCACGCAG
TCCATCCCTTCCGTCATCGCTGCCAGCCTCTCGGCGTCTTTCTCGTCATC
ATTCACCCCCGCCAAGAGCAGGTACTCCAGAGCCACAGGCCCCCGCCGCC
GCCGCTCCCTCCGTCCGGTGCTCGTCGCAGCTCGAGGGAGGGGGAAGTGC
CGGCGCAGGGAGGGAAGGAGGGAGCTGGAGAGGGGGTACCGGCGATTGAT
CGGCATGAAGGAGCTTCGGACCTGGGGAGGGAGGGAGGA back to topprotein sequence of rna3748 >rna3748-protein ID=rna3748-protein|Name=rna3748|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MNRTDLRISSTMVAHNQSAGHVTFRPFSKPENPEAPYLTVQSDKPVALPA
YSEHSLWTVEHLPNDEVALKGYNGHYLSVNSHFQVHMAKELSKESHLQFV
THADFPGCVAIKETVHHTFLA back to topmRNA from alignment at CM002461.1:1117918..1119107+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3748 ID=rna3748|Name=rna3748|organism=Nannochloropsis gaditana|type=mRNA|length=1190bp|location=Sequence derived from alignment at CM002461.1:1117918..1119107+ (Nannochloropsis gaditana)
AGTAAGCGAATCCTAGACTGTCGCTAGTACCGCAACGCTATACGGACAGA
AAAAGGACCGATAGTGCCCACCTTGCGTTGCGTTCGAACAAAATCTGTGG
GGTCGCGACGTTGTGTGGTCGATGAAGCAGGCGTGTCGATGCGTGCCTGG
TCAAAGGCTGTTTGGAAATGTCGCGTGACAGCGTGTTGAAACTAAATGTT
CCACTTGGCTGCTTGTAAGAGATGGACTTCGTCGAACAAAAGCTCAACTC
GTCGACCGGGGCTTTCGCACGATTCAGAAGTGAGCAGTTGTCTGAATAGC
TACCAGACACTCATCTCATTTATacgtctttccttttttttccgcctttc
cttccgttGCATCAACCCCATGTCATGAACCGTACAGACCTTCGCATCTC
TTCTACCATGGTAGCTCACAACCAATCTGCTGGGCACGTCACTTTTCGCC
CTTTCAGCAAGCCTGAGAACCCAGAGGCGCCCTACCTGACGGTGCAATCG
GATAAGGTGAATGGGGGGAAGACTTTTGTAGGGGCTCATGGTTACCCTGT
GACATATGGCTTGCTTCTCCCTGCGATAGGTCTGGCATGTCGTCTCCGAC
aacccacctccctcctccctaacaccctctcctttctctagCTTCCCCCA
TGCTCCACTATCTCACCCGACTCGCGCTCGTCTTTGTTCCCGCATTCCTT
TACGTTGGCAGCATTGTTCGCTGCTCCCCATTTTCATaaccgtccttcct
cccttccttctccctagCCCGTGGCTCTGCCAGCTTACAGCGAGCACTCC
TTATGGACGGTGGAGCACCTGCCCAACGACGAGGTCGCCCTCAAGGGCTA
CAACGGGCACTACTTGAGCGTCAACAGTCACTTTCAAGGTATTTtcagag
gggaaaggggaagggagatcGGTTTATGTGATGGACATAGGTATAAATAT
GGAAGGAAACTCGGTTCAAAGTGGTGGATAAGGCAACGGCCAGGGTACTC
tcaaggaggcagagggaatCGCCCCGttccacgcccccccttgtcccccc
ccccaccaccacccagTCCACATGGCGAAAGAGTTGTCGAAAGAGTCGCA
TCTGCAGTTTGTGACGCATGCGGACTTTCCCGGGTGTGTGGCCATCAAGG
AGACGGTGCACCATACCTTCCTTgcgtaaggagggagggt back to topCoding sequence (CDS) from alignment at CM002461.1:1117918..1119107+ >rna3748 ID=rna3748|Name=rna3748|organism=Nannochloropsis gaditana|type=CDS|length=1098bp|location=Sequence derived from alignment at CM002461.1:1117918..1119107+ (Nannochloropsis gaditana)
ATGAACCGTACAGACCTTCGCATCTCTTCTACCATGGTAGCTCACAACCA
ATCTGCTGGGCACGTCACTTTTCGCCCTTTCAGCAAGCCTGAGAACCCAG
AGGCGCCCTACCTGACGGTGCAATCGGATAAGCCCGTGGCTCTGCCAGCT
TACAGCGAGCACTCCTTATGGACGGTGGAGCACCTGCCCAACGACGAGGT
CGCCCTCAAGGGCTACAACGGGCACTACTTGAGCGTCAACAGTCACTTTC
AAGTCCACATGGCGAAAGAGTTGTCGAAAGAGTCGCATCTGCAGTTTGTG
ACGCATGCGGACTTTCCCGGGTGTGTGGCCATCAAGGAGACGGTGCACCA
TACCTTCCTTgcgtaaATGAACCGTACAGACCTTCGCATCTCTTCTACCA
TGGTAGCTCACAACCAATCTGCTGGGCACGTCACTTTTCGCCCTTTCAGC
AAGCCTGAGAACCCAGAGGCGCCCTACCTGACGGTGCAATCGGATAAGCC
CGTGGCTCTGCCAGCTTACAGCGAGCACTCCTTATGGACGGTGGAGCACC
TGCCCAACGACGAGGTCGCCCTCAAGGGCTACAACGGGCACTACTTGAGC
GTCAACAGTCACTTTCAAGTCCACATGGCGAAAGAGTTGTCGAAAGAGTC
GCATCTGCAGTTTGTGACGCATGCGGACTTTCCCGGGTGTGTGGCCATCA
AGGAGACGGTGCACCATACCTTCCTTgcgtaaATGAACCGTACAGACCTT
CGCATCTCTTCTACCATGGTAGCTCACAACCAATCTGCTGGGCACGTCAC
TTTTCGCCCTTTCAGCAAGCCTGAGAACCCAGAGGCGCCCTACCTGACGG
TGCAATCGGATAAGCCCGTGGCTCTGCCAGCTTACAGCGAGCACTCCTTA
TGGACGGTGGAGCACCTGCCCAACGACGAGGTCGCCCTCAAGGGCTACAA
CGGGCACTACTTGAGCGTCAACAGTCACTTTCAAGTCCACATGGCGAAAG
AGTTGTCGAAAGAGTCGCATCTGCAGTTTGTGACGCATGCGGACTTTCCC
GGGTGTGTGGCCATCAAGGAGACGGTGCACCATACCTTCCTTgcgtaa back to top
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