rna3745, rna3745 (mRNA) Nannochloropsis gaditana

Overview
Namerna3745
Unique Namerna3745
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1481
Alignment locationCM002461.1:1111547..1112335 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102570g1.2724.mrna
Orig protein idgnl|cribi|Naga_102570g1.2724
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1111547..1112335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102570g1gene3608Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3745rna3745-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26937.1cds3736Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3745 ID=rna3745|Name=rna3745|organism=Nannochloropsis gaditana|type=mRNA|length=1481bp
GTGGGGATTGCGTCCCATGGTTGTGCGATGTCCGGGGTCGGAGTCTCGCC
GACGCCACAGACGCACGTCGAATCCTCCATAATCTATCTGTCTTCGGGGG
GGGTCGCGTTTCTGACCGACTTTGGTGCAGGTTTTCTGGTGGAGAAACCT
ACCACATGTCATCCATCTGTCGGTTTTGTCCGCGTCATACCGCGCGAGGC
CCATGGTAGGGCTCGTTTGGGTTACTTTCAGGGGAGAAAGGCGTACCCGC
AGGAGAGGCATAGAAGTTCAAGTACTTTTCTTATAGGCGACGGGAGGACG
ACAAAGCAGTCCAGCCTCCTGAATGTTGTTCGCGTTTTCATGCGCCGAAT
GCCACGGTGATGTTATGGCTCCACTTTCCATGTTCACGGACTACCAAGCC
GCACGATCAGTGTCGTGGCATTTTGGGTCCTGGTTTTTCCTTACAATATC
AACTTCCCTTTTTCTATTCAGGAAAGGCGAGGTGGTATCCCACAAGCAAA
CCCCTCATCTTGCCGTCGAGACGAGTTTATTCCTTCATCACCGCACACGT
TTGCTCATGCACGTGTTTCACGGCAATTTGTAGAGGTTATTTTTGAGACC
TAATTTTCATGTCTGGCCCCTCCGGCTCCCGTCAACCCCCTCAGACGTTG
GAAGAAACGCATATTGGCGGTGGCAAACGGAGGCGCGGCCCCATGCCTGA
AGACCCGTCCGGACAACTTCATATGCAAGAACCCGGTGCACAGCATGTGC
AGCAAAGTCAAGGATTGTACAGGAACGCAACGTGCCCCGAGTACAACTGG
CCCCGTTCATCCCATGATGCGGGAGGAGGAGGAGGCGGGGGAGGGAAAGC
GAGCGATTTGACGGGCCGGACCGTTGACGGCTCGCACTTAGGTCTGCTGA
ATATGTCAGGGGATCATGTCTTGCCGCACTCGATGGGAAGAGAAGGGAGG
CCGAATCGAAGCGGGGGAGGAGAGGAGTATGGATGGGGGTCTTCCACGCA
GGAAAGCTTCCCGCCTCCTCACCCCCGCCACGCCGGGCAGGCGACCTCGC
TGATGCCAGGAAGGCCCTCCCACGACACGGTCGGCTCCATGCTCTACCCA
CCCTCCTCCTTCCCCGCCTCCTACCCCTCCGCCCTCCCCAGCTTTGCCTC
GTCGGAGCGTTGCCCTCTGGGCGGGCTGGGCAGCACGCATCCTCACGAAC
TTCCGCCCCACCATTCCCAGCAACAACAGCAGCCCTCCCTGTCTCCCAAC
ACGCACTCCCCCTTCCACTTGCTCAATTCCGATCGCCCCGTGCATCACAG
CATCCATCTAGCCCAGCAGATGACCGCCTCGCCGGCCTCCCTCCCGCCCT
CCCTCCCGCCCTCCCTCCCGGCTTCCTCCCCCTCGCCCTACCCTGACATG
CATGGGCTGTGCACGTCAGCTGTCTTCGCGTCAGCAGGTGTGCCGTTGAC
GCCAGCCACGAGGACCAAGCTGGGTAGGTGC
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protein sequence of rna3745

>rna3745-protein ID=rna3745-protein|Name=rna3745|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
LPGHPPPLPLRPPRPARSAKEAWAEGRAGGREGPRGIRRSTGSENAATRA
LPPPPLPPPRPPTTGSTRKKARLPPAKCNLAWASVARRGGLAAAAGALPT
YPEEREEADRGPPAMGAKGRGKGRGGGRGGGGRGSPIQGARRTFPSRATP
ARRATVAGAGEWIGSDRVGARFLFARFFPFFFFLSVGVRVSPLSSSCTFH
CPYIAPSPALLTLPPGTERWTPAPAITHREGSTANANARSRPASARRSSK
RTMQRWR
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mRNA from alignment at CM002461.1:1111547..1112335+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3745 ID=rna3745|Name=rna3745|organism=Nannochloropsis gaditana|type=mRNA|length=789bp|location=Sequence derived from alignment at CM002461.1:1111547..1112335+ (Nannochloropsis gaditana)
CTGCCAggacatcctcctcctcttcctcttcgtcctcctcgtccagcgAG
GAGCGCGAAGGAAgcatgggcggaggggagggcgggggggagggagggtc
cgcGGGGCATTCGTCGGAGCACGGGGAGCGAGAACGCAGCAACTCGAgca
ctacctcctcctccacttccaccgcctcgccctcccaccaccgGCTCCAC
CCGCAAAAAGGCTCGGCTGCCACCAGCGAAATGCAACTTGGCGTGGGCCT
CGGTggcccggagggggggattggcagccgcagcgggagccctccccacc
tacccggaggagagggaagaagcggatcGCGGCCCGCCCGCGATGGGAGC
GAAGGGGCggggcaaaggaagggggggaggaagggggggaggggggaggg
gatctCCGATacagggagcgaggagaacTTTTCCCTCTCGAGCGACTCCG
GCTCGTCGAGCGACAGTGGCGGGGGCGGGTGAGTGGATCGGATCGGATCG
GGTCGGGGCCCGCTTTCTTTTCGCGCgtttttttccatttttttttttcc
tctctgtGGGAGTGCGGGTTTCCCCTCTGTCGTCCTCATGTACTTTCCAT
TGCCCTTATATAGCACCCTCACCTGCCCtccttaccctccctccaggaaC
GGAAAGGTGGACCCCAGCGCCTGCCATCACTCATCGGGAGGGATCAACAG
CCAACGCCAATGCGCGCAGCAGGCCAGCATCAGCACGCAGAAGCAGCAAA
CGCACAATgcagaggtggaggtgaaaggaaaaagcgggg
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Coding sequence (CDS) from alignment at CM002461.1:1111547..1112335+

>rna3745 ID=rna3745|Name=rna3745|organism=Nannochloropsis gaditana|type=CDS|length=774bp|location=Sequence derived from alignment at CM002461.1:1111547..1112335+ (Nannochloropsis gaditana)
CTGCCAggacatcctcctcctcttcctcttcgtcctcctcgtccagcgAG
GAGCGCGAAGGAAgcatgggcggaggggagggcgggggggagggagggtc
cgcGGGGCATTCGTCGGAGCACGGGGAGCGAGAACGCAGCAACTCGAgca
ctacctcctcctccacttccaccgcctcgccctcccaccaccgGCTCCAC
CCGCAAAAAGGCTCGGCTGCCACCAGCGAAATGCAACTTGGCGTGGGCCT
CGGTggcccggagggggggattggcagccgcagcgggagccctccccacc
tacccggaggagagggaagaagcggatcGCGGCCCGCCCGCGATGGGAGC
GAAGGGGCggggcaaaggaagggggggaggaagggggggaggggggaggg
gatctCCGATacagggagcgaggagaacTTTTCCCTCTCGAGCGACTCCG
GCTCGTCGAGCGACAGTGGCGGGGGCGGGTGAGTGGATCGGATCGGATCG
GGTCGGGGCCCGCTTTCTTTTCGCGCgtttttttccatttttttttttcc
tctctgtGGGAGTGCGGGTTTCCCCTCTGTCGTCCTCATGTACTTTCCAT
TGCCCTTATATAGCACCCTCACCTGCCCtccttaccctccctccaggaaC
GGAAAGGTGGACCCCAGCGCCTGCCATCACTCATCGGGAGGGATCAACAG
CCAACGCCAATGCGCGCAGCAGGCCAGCATCAGCACGCAGAAGCAGCAAA
CGCACAATgcagaggtggaggtga
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Synonyms
Publications