EWM26937.1, cds3736 (CDS) Nannochloropsis gaditana

Overview
NameEWM26937.1
Unique Namecds3736
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1111547..1112320 +

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Properties
Property NameValue
Start range1111547
Start range.
Protein idEWM26937.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102570g1.2724.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1111547..1112320 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26937.1 vs. NCBI_GenBank
Match: gi|585109076|gb|EWM26937.1| (hypothetical protein Naga_102570g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 486.108 bits (1250), Expect = 4.421e-173
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 
Query:    1 LPGHPPPLPLRPPRPARSAKEAWAEGRAGGREGPRGIRRSTGSENAATRALPPPPLPPPRPPTTGSTRKKARLPPAKCNLAWASVARRGGLAAAAGALPTYPEEREEADRGPPAMGAKGRGKGRGGGRGGGGRGSPIQGARRTFPSRATPARRATVAGAGEWIGSDRVGARFLFARFFPFFFFLSVGVRVSPLSSSCTFHCPYIAPSPALLTLPPGTERWTPAPAITHREGSTANANARSRPASARRSSKRTMQRWR 257
            LPGHPPPLPLRPPRPARSAKEAWAEGRAGGREGPRGIRRSTGSENAATRALPPPPLPPPRPPTTGSTRKKARLPPAKCNLAWASVARRGGLAAAAGALPTYPEEREEADRGPPAMGAKGRGKGRGGGRGGGGRGSPIQGARRTFPSRATPARRATVAGAGEWIGSDRVGARFLFARFFPFFFFLSVGVRVSPLSSSCTFHCPYIAPSPALLTLPPGTERWTPAPAITHREGSTANANARSRPASARRSSKRTMQRWR
Sbjct:    1 LPGHPPPLPLRPPRPARSAKEAWAEGRAGGREGPRGIRRSTGSENAATRALPPPPLPPPRPPTTGSTRKKARLPPAKCNLAWASVARRGGLAAAAGALPTYPEEREEADRGPPAMGAKGRGKGRGGGRGGGGRGSPIQGARRTFPSRATPARRATVAGAGEWIGSDRVGARFLFARFFPFFFFLSVGVRVSPLSSSCTFHCPYIAPSPALLTLPPGTERWTPAPAITHREGSTANANARSRPASARRSSKRTMQRWR 257
The following BLAST results are available for this feature:
BLAST of EWM26937.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109076|gb|EWM26937.1|4.421e-173100.00hypothetical protein Naga_102570g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3745rna3745Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications