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Properties
| Property Name | Value |
|---|
| Product | trna-dihydrouridine synthase 3 |
| Orig transcript id | gnl|cribi|Naga_101321g2.2570.mrna |
| Orig protein id | gnl|cribi|Naga_101321g2.2570 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1104544..1105732 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3741 ID=rna3741|Name=rna3741|organism=Nannochloropsis gaditana|type=mRNA|length=704bp
ACTAGAAATAGGTGCAGGTAATTCTAGGGACGCATTATGGAGCATGGTAC
GGCCATTTTCAGCATAGAACACGAAAAAGAAGCTGGCGAGGGTGGGGGTG
GCTCAAGGGGAGCCGCAGCGGGTTACGTGCGAATGGAGGAAAGCTTAGAG
TGGGAAGACGATGAATGGCAATGCACGCAGGACGAGTACCCCTCCGCGGA
CCACGTGGGACGTGTACCTTTCAACGACCACCTCCAAGGCCTCGTCCCTC
TCCCTCCCGGCTCAGGAAGGCATGCGACCGGGGGAGGGAGGGAAGGAGGA
GGAGGGGCAAAACGACCCTACCCGTCCCCCTTCAGCCTTCCTCCCCTGGA
AGCGGACGGCAAAAAAGCAAAGGCTCCTGGACCGAGCACCGACCCTCCTC
CCTCCCTCCCTCCCTCACTCCCTTCTGCCCTCCCGCCCGCCCTCCCACCT
CGCCGGGTCACCCGTCGCCGGTTCGACTGCAACCTGTATGGGCCCATATA
CATGGAAGGGTTGTGTCTGGCTATCATTGATACCCCTCAGTTCCAGCGCC
TCGGTAGTATCGCGCAGCTGGGCGCCTGCCCGCTTGTCTACCGGGGGGCT
ACCCACACCAGGCTCCAGCACTCCTTGGGCGTGGCCCATCTAGCCGGGGA
GTTCGTGAAGACTCTGGTCAGGAACCAGCCAGACCTCCTCCGAGAGGGTA
GGGA back to topprotein sequence of rna3741 >rna3741-protein ID=rna3741-protein|Name=rna3741|organism=Nannochloropsis gaditana|type=polypeptide|length=242bp
MCLTYHSLKEKGANHPAPPPQENPYTSYLPQTWVSTLFHVLKLPTFPIKV
LVYQEKYMSLGTAATGASLSSVATSEAPSTQIEDASTPKQNALPNATEDE
EKTGQNQSQANGQENEHKANDHGAIHAGKGWESDVIVKAEYRIPKFVPIS
APAPSSLPPSDLPLHPRHDTPVADTPDAKAKKKKGGRNHKRPRDDAQAEG
GEGLCRSFLEKRCLYGEACKFSHDVRGYLARKPPDLGSHCPV back to topmRNA from alignment at CM002461.1:1104544..1105732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3741 ID=rna3741|Name=rna3741|organism=Nannochloropsis gaditana|type=mRNA|length=1189bp|location=Sequence derived from alignment at CM002461.1:1104544..1105732- (Nannochloropsis gaditana)
TGGGAACTCAAAGAAAGGGTTTCTTGCTACACACCACCCTTCAACGACCG
TCTGCAATGCCTGTTGAGTGCATGGATGCTGGCATGGAGGCAAAGAGTGC
ATGTGCCTGACCTATCATTCCCTCAAGGAAAAAGGCGCCAACCATCCAGC
CCCCCCCCCCCAGGAAAACCCGTACACTTCCTATCTGCCACAAACCTGGG
TATCTACCCTCTTTCATGTCCTCAAATTGCCAACATTCCCTATAAAAGTA
TTGGTGTACCAGGAAAAATACATGTCTTTGGGGACTGCGGCTACTGGCGC
GAGCCTATCGTCCGTCGCGACATCAGAAGCACCGTCTACACAAATTGAAG
ACGCTTCAACCCCGAAGCAAAACGCACTCCCAAACGCCACGGAAGACGAG
GAAAAAACCGGGCAGAACCAATCTCAAGCAAACGGTCAAGAAAACGAACA
CAAGGCAAACGATCACGGAGCCATACACGCAGGAAAAGGCTGGGAAAGCG
ACGTAATAGTCAAAGCCGAGTACGTGTGCGGGGAGGTACCCCGCTCTGTC
CTATATAAAAGACGATGCGAACTTCACCGTTGTACGGCACCTCGAGACTC
TCATATATAGCATATTTGCCATTCAATACCCTCTTTTAGGTACCGCATAC
CCAAATTTGTGCCCATCTCGGCCCCAGCTCCATCCTCCCTTCCTCCGTCA
GATTTGCCCCTCCACCCTCGACACGATACGCCCGTGGCGGATACTCCGGA
CGCAAAAGCCAAGAAGAAAAAAGGGGGACGGAACCATAAACGACCGCGGG
ACGATGCTCAGGCGGAGGGTGGGGAAGGCTTGTGCCGGTCGTTTTTGGAG
AAGCGGTGTCTGTACGGGGAGGCATGCAAATTTTCTCATGACGTCAGAGG
ATATTTAGCCCGAAAACCACCGGTGAGTGTCGTATCCTGTCTCGGTCCCT
GAAGAGTAACAGATGCTGAGCAATCCTTCTCTACGACAATTATCAACCTC
CTGGCCGCTTTGCCACCGCAGAAGCGCCTTTCCCCTTCCCCCTCTCTCCC
TCCCTTCCCCCTCTCTCCCTCCCTTCCTCCCTCCTTCCTCATTTCCCCTC
CCCCTCCTCACCACCTCCCCCTCACTCTCTTCTTCCCCCCCCCCCCATCT
TGCTCTCCTTGTAGGATCTAGGAAGCCATTGCCCCGTCT back to topCoding sequence (CDS) from alignment at CM002461.1:1104544..1105732- >rna3741 ID=rna3741|Name=rna3741|organism=Nannochloropsis gaditana|type=CDS|length=2181bp|location=Sequence derived from alignment at CM002461.1:1104544..1105732- (Nannochloropsis gaditana)
GATCTAGGAAGCCATTGCCCCGTCTGTACCGCATACCCAAATTTGTGCCC
ATCTCGGCCCCAGCTCCATCCTCCCTTCCTCCGTCAGATTTGCCCCTCCA
CCCTCGACACGATACGCCCGTGGCGGATACTCCGGACGCAAAAGCCAAGA
AGAAAAAAGGGGGACGGAACCATAAACGACCGCGGGACGATGCTCAGGCG
GAGGGTGGGGAAGGCTTGTGCCGGTCGTTTTTGGAGAAGCGGTGTCTGTA
CGGGGAGGCATGCAAATTTTCTCATGACGTCAGAGGATATTTAGCCCGAA
AACCACCGATGTGCCTGACCTATCATTCCCTCAAGGAAAAAGGCGCCAAC
CATCCAGCCCCCCCCCCCCAGGAAAACCCGTACACTTCCTATCTGCCACA
AACCTGGGTATCTACCCTCTTTCATGTCCTCAAATTGCCAACATTCCCTA
TAAAAGTATTGGTGTACCAGGAAAAATACATGTCTTTGGGGACTGCGGCT
ACTGGCGCGAGCCTATCGTCCGTCGCGACATCAGAAGCACCGTCTACACA
AATTGAAGACGCTTCAACCCCGAAGCAAAACGCACTCCCAAACGCCACGG
AAGACGAGGAAAAAACCGGGCAGAACCAATCTCAAGCAAACGGTCAAGAA
AACGAACACAAGGCAAACGATCACGGAGCCATACACGCAGGAAAAGGCTG
GGAAAGCGACGTAATAGTCAAAGCCGAGATCTAGGAAGCCATTGCCCCGT
CTGTACCGCATACCCAAATTTGTGCCCATCTCGGCCCCAGCTCCATCCTC
CCTTCCTCCGTCAGATTTGCCCCTCCACCCTCGACACGATACGCCCGTGG
CGGATACTCCGGACGCAAAAGCCAAGAAGAAAAAAGGGGGACGGAACCAT
AAACGACCGCGGGACGATGCTCAGGCGGAGGGTGGGGAAGGCTTGTGCCG
GTCGTTTTTGGAGAAGCGGTGTCTGTACGGGGAGGCATGCAAATTTTCTC
ATGACGTCAGAGGATATTTAGCCCGAAAACCACCGATGTGCCTGACCTAT
CATTCCCTCAAGGAAAAAGGCGCCAACCATCCAGCCCCCCCCCCCCAGGA
AAACCCGTACACTTCCTATCTGCCACAAACCTGGGTATCTACCCTCTTTC
ATGTCCTCAAATTGCCAACATTCCCTATAAAAGTATTGGTGTACCAGGAA
AAATACATGTCTTTGGGGACTGCGGCTACTGGCGCGAGCCTATCGTCCGT
CGCGACATCAGAAGCACCGTCTACACAAATTGAAGACGCTTCAACCCCGA
AGCAAAACGCACTCCCAAACGCCACGGAAGACGAGGAAAAAACCGGGCAG
AACCAATCTCAAGCAAACGGTCAAGAAAACGAACACAAGGCAAACGATCA
CGGAGCCATACACGCAGGAAAAGGCTGGGAAAGCGACGTAATAGTCAAAG
CCGAGATCTAGGAAGCCATTGCCCCGTCTGTACCGCATACCCAAATTTGT
GCCCATCTCGGCCCCAGCTCCATCCTCCCTTCCTCCGTCAGATTTGCCCC
TCCACCCTCGACACGATACGCCCGTGGCGGATACTCCGGACGCAAAAGCC
AAGAAGAAAAAAGGGGGACGGAACCATAAACGACCGCGGGACGATGCTCA
GGCGGAGGGTGGGGAAGGCTTGTGCCGGTCGTTTTTGGAGAAGCGGTGTC
TGTACGGGGAGGCATGCAAATTTTCTCATGACGTCAGAGGATATTTAGCC
CGAAAACCACCGATGTGCCTGACCTATCATTCCCTCAAGGAAAAAGGCGC
CAACCATCCAGCCCCCCCCCCCCAGGAAAACCCGTACACTTCCTATCTGC
CACAAACCTGGGTATCTACCCTCTTTCATGTCCTCAAATTGCCAACATTC
CCTATAAAAGTATTGGTGTACCAGGAAAAATACATGTCTTTGGGGACTGC
GGCTACTGGCGCGAGCCTATCGTCCGTCGCGACATCAGAAGCACCGTCTA
CACAAATTGAAGACGCTTCAACCCCGAAGCAAAACGCACTCCCAAACGCC
ACGGAAGACGAGGAAAAAACCGGGCAGAACCAATCTCAAGCAAACGGTCA
AGAAAACGAACACAAGGCAAACGATCACGGAGCCATACACGCAGGAAAAG
GCTGGGAAAGCGACGTAATAGTCAAAGCCGA back to top
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