rna3739, rna3739 (mRNA) Nannochloropsis gaditana

Overview
Namerna3739
Unique Namerna3739
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length935
Alignment locationCM002461.1:1101001..1101283 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101585g2.7119.mrna
Orig protein idgnl|cribi|Naga_101585g2.7119
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1101001..1101283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101585g2gene3602Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3739rna3739-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26943.1cds3730Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3739 ID=rna3739|Name=rna3739|organism=Nannochloropsis gaditana|type=mRNA|length=935bp
CCTCTCCAAATTATTTAAAAATCCCGCCCTTTGTCTGAATCAACGAGAAG
ACAACGGAGAGCGAACGAGAGCGGATGCCTTTGGTTTTGGGACGGTGTTC
TTCTCTTTGGGTTACCGTCACGTGGTGGGCTTTTGTGGCCACGGTCATTT
AAGAAAGGCGACATAAAGCGGAGATTATTATATAAATCTGTTCCGTCCAA
TATGCCGTGCCCTCGCTCACAAGCCGTGCGGGGAGGTCAAGCGACTGCCT
TGGATATTGGGACTTTATCGAATACATGACATCGAATCATTGCCACAGCA
AATATCACAGTGGTGTCAACATTATAATTTGCGTGTTGTCAGCTTTGTGG
AGGTCTTCCCCACTTAGGTCAATGGCGCAGAGTCATCCGGGGATGGATAT
CAACAGCTCGAACTCTTCACCGAGGGAAGCGTCGCCGGTCTCTCTCCCCA
CGCCAATACGCCTTGTGTCCATCTCTCTCTCGTCGGGAATGGATATGAAG
GAAAAAACTGAGGATGCCCAGGATGAGGAACCCAAGCAGGAAGGAGGAAA
ATCTCACGGCGGGGCTATCCCCCTGCAGATAGACGAAGCAGCCGCCCCAT
CTCCGTCTTCAAAAGCTCGGGCGCAACCGCGACCGTGGTGGCTAAGCATC
CTGTTTGTGACCCTATCCTTTATCGTGATCGCTTCCGTCCTTGTGGCCAT
CATCATGCGGTACCATGAAGGCATTTTGACCGCCGCCCGCTGGTGTCAGG
AGCGACAACCCTGGTCGATAATTTTAAATGGCTGTATCATCGTCGGAGCC
AACATTTTAGGGTTTCCCACCATGCCAATTGAGGATTTCACGGCCCTCCG
GGTGGCTTTTAAGAAACGACCCTGGCGGTTGATGCTGCTGTTGCGGCTGG
CGTTCATGCCGGGCGTCATCAAAAAACTACGGTGA
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protein sequence of rna3739

>rna3739-protein ID=rna3739-protein|Name=rna3739|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MKSQVPLSTFPSNRPIEKHTSHDSSLGISPMDSVRHPFESIAETINGAAV
LLDAGAGEVSLAGQAV
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mRNA from alignment at CM002461.1:1101001..1101283-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3739 ID=rna3739|Name=rna3739|organism=Nannochloropsis gaditana|type=mRNA|length=283bp|location=Sequence derived from alignment at CM002461.1:1101001..1101283- (Nannochloropsis gaditana)
ATGAAGTCCCAGGTCCCCCTCTCCACATTTCCTTCAAACCGTCCTATTGA
AAAGCATACGTCCCATGATTCTTCTCTAGGCATATCCCCCATGGATAGTG
TCCGACATCCTTTCGAAAGCATCGCGGAAACGATCAACGGCGCCGCGGTC
CTGCTGGATGCCGGAGCAGGAGAGGTGTACAGATAACATTTCGAGGGGGA
CAGGCAGGAATGTTGCTATTATCGACTCTCATGCCTCACTCACGTTTATC
CCGCGTAGATCGCTCGCTGGGCAGGCGGTGTAA
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Coding sequence (CDS) from alignment at CM002461.1:1101001..1101283-

>rna3739 ID=rna3739|Name=rna3739|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at CM002461.1:1101001..1101283- (Nannochloropsis gaditana)
ATCGCTCGCTGGGCAGGCGGTGTAAATGAAGTCCCAGGTCCCCCTCTCCA
CATTTCCTTCAAACCGTCCTATTGAAAAGCATACGTCCCATGATTCTTCT
CTAGGCATATCCCCCATGGATAGTGTCCGACATCCTTTCGAAAGCATCGC
GGAAACGATCAACGGCGCCGCGGTCCTGCTGGATGCCGGAGCAGGAGAGG
TATCGCTCGCTGGGCAGGCGGTGTAAATGAAGTCCCAGGTCCCCCTCTCC
ACATTTCCTTCAAACCGTCCTATTGAAAAGCATACGTCCCATGATTCTTC
TCTAGGCATATCCCCCATGGATAGTGTCCGACATCCTTTCGAAAGCATCG
CGGAAACGATCAACGGCGCCGCGGTCCTGCTGGATGCCGGAGCAGGAGAG
GT
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Synonyms
Publications