|
|
Properties
| Property Name | Value |
|---|
| Product | had-like protein |
| Orig transcript id | gnl|cribi|Naga_100304g6.3102.mrna |
| Orig protein id | gnl|cribi|Naga_100304g6.3102 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1069175..1071774 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3726 ID=rna3726|Name=rna3726|organism=Nannochloropsis gaditana|type=mRNA|length=1953bp
ATGCTGCTTGGCTTGATTAATCTGGCCCCCCGGCAGAGCGGTGGCTTTGC
CCATCTAGAAGATGACGTAGATATAGAATCTAAAGTAACGACGGGGAATG
CAAATCGGCACGGTAGGGAAAGAAATCCCGGCCCTTTTATAATGGCATTG
ACCTCTCCCACATGCTCCGTAGCTGGCCTAGCCTCAGCTCAAAGTAGACA
GACCGTGGGTGCGATAACCCATAAACACGCGCCCACACGAGACAAACAGA
AACAAGAGGTCAAGCAAGTCCCGGTTTTTACGAAGGCTGCCGAAAGCAGC
TCAATGCTCTGCACGGTGTACGAAGACAGACCACTGGAAAACGCGGACGT
GATATCCCCACCTCAGGGGAGAGAAAAGCGAAGCGTCACGACCAAGCCGA
TTCCTTACTGGTCCATAACCAGGCTTAGCCTGCCTGCAGGCAGCGTATAC
CTCCTACTTACCTTTCTCCTTCACTCCATGCACACCTCGGTGTTGACTTG
GATCCTGTCGTCTCCGCCGTCCTCGACCTTCCCTCAGGGGGGTTCCTCTC
CGACCTCTTTCCTCGCTGCTGCCACGATCTTCGCCCTTCCTTTCGCGTTC
TATCTCCATCGAGCAGATCTAGGTCGCCTGCGCGAGGTGCAGGTCAAGGA
ATGGTGGGCCCTGGTGGCGGTGACCGTCTTCGGCCCGCTCTTAACATCCC
GCCTCCTCCTCGCTGGCCTCGTAAAGACAAACGTCCCCGTCACAAGCGTG
CTAAGCCGCGTGGACATCCTTGTGCTCCTCATCTGCCACACCTGGGCGGA
TCGCTCTTCGAGCCGGGTGTCGCGGCGGTGGTCATTCCTGTCGGACGGAA
GTAGCGCGATGGGGAGGGAGGGGCAGGCGGAAGACGAGCAAGAGGAGCAG
GAGGTGGGAGAGAAGGCGGCAGCTGCTGAGACTGAGACCACGAGGGGCAA
ATCTCAATGCCCGCTCCCACTGAACGACAGCGTTGGGGAGGAACGAAGGC
TTTTCTCCCCATTGCGGGATCCTCGTGAGGGGTGGTGGCTCGGCAGCGGC
GTCCTCTTGCTCTTCCTAGGTGCAGTCCTGTCATTTCTCACAAGCGATCC
ACAAGGACAAGGAGACAACAAAGGGATCGACACGCAGCCTACGGGGGCTC
TCGTCTCCCTCCCTGCCTTCCAGGGTCGAGCCTGCTTGGTCCTGAGTGCC
CTTTGCTTTGCCTTGGCCCAAGAACTTACCCGGATGTACCTCTCGACCGT
TCCCGCCGGGCTCTGTGCGGTGGGACGTCTCTGCCTCGCAGGCTTCGGGT
TCCATGTTCTGGCCTGGGCGGAAAGCGGGGGCAGCGCGCTCGCCGGCATC
TACGAACCTCGGCATTGGTTGACACTGGTTGGCTATGGCCCGTTTTTCCT
ATGGGGCCTCCACTACCTCTGGTTCCAGTCCCTGACCGCCTTGGCTTCCG
CTTCCCCCTCCTTCCCGACCTCCCCCCCGCCCTCCTCCTTCTCCTTCCCC
GGGAACCCCTTCCTCTTCCTCGCCTTCTCTTGCTCCCTGGTTGTCGAACT
CTTTTGGAGCCGGCTGTTGCTGGGGACCCGCGTCACTATGGGGGAGAGTG
TGAGTGCGGCGCTGACACTAACAGGATGTCTGTGCCTGTGGAAAAAAAGG
GACAGGAGGGAGGGAGAGGGGGATGGCGGGAGGGAGGGAGAGGGGGAGGG
GGAGGGAGGGAGGGAGGGAGGGGGAGGAGCTCGAAGGAGGGGGCCGGGGG
GGGTGACAAGCAGGAGGGAGGACGAGGGCGGGGACGTGGAAGGAGGAGAC
AGAAGAGGCAAAGAGGACCAAAAGCCACAGACATGGATCGGAGGGAGGCA
AAAAGGCAGGAGGGATGGCGCGAGGGAGGGTGCGCGGCAAGCCGTGGCCG
GGCGCGGAGTCGAACCCGCGCAGGAAATAGCCTTGCGGTTTCGGTTGGTA
TGA back to topprotein sequence of rna3726 >rna3726-protein ID=rna3726-protein|Name=rna3726|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MTRHIQKQWRARCRQKCKPRDRSEANGCMMVKRHRRQNDEPLVRLGPSLS
TVKSHAAVIVVDDSSDEECEGGSREASCSKRLPKTTPIETHATNRSEMLR
LPPSTASFPKGCPPFISPTSDSAHQRLRVLLAALSSPCNHPFPSSPSSRS
MASPSSILPSSLLPSLVIVDLDYTLWKGNVSDQVITALHGVTRLAIASRA
PDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQE
PQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGC
CAQSVSCADGLSWASLEKGLRLYREKGRARSIMAKHFVKK back to topmRNA from alignment at CM002461.1:1069175..1071774- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3726 ID=rna3726|Name=rna3726|organism=Nannochloropsis gaditana|type=mRNA|length=2600bp|location=Sequence derived from alignment at CM002461.1:1069175..1071774- (Nannochloropsis gaditana)
ATGACAAGACATATTCAAAAACAATGGCGCGCACGCTGCCGACAGAAGTG
TTTGTGGACATAGCGATGCCTTCGCAAGTGTGGGATGGACTCAGTGTTTC
TTTTCTTTCTCAATCTTTTTCCGTCTAGAGCGTCCTTGCTCTCTCCTTAC
GTTCCTGAACTCCTCGGGCACATGTCTGATGCCATACATGCCTGCCAAAA
TTGTTGTTATTATTTCTCTCTGGCAATCAAGGTTTCGTCGCCTATCATTT
GTTTTATATGACTATTTACTGGATTTTCAACAGTCGCTGGGATGCTGTTT
ATAAGTTTGCATTGCGGTACAACGAGCATTCTAGTATGGTGCCCCGTCTG
GCTTTGTGAATTCCTCTATGCGTACTGTATTTGTCTACCGGTTGAGTGTA
CGCACACGCCAAAGCAAAATGAATTGTGGCGATGGTTACAATCTCGCCAC
CTTTATCGCGGGGAAACCCTGCAAATTGGTGGTTGTCTTGGCCTTGAAAC
GCTCGTTTTGTCGGGAGAGCGTGTGTCTATGTGTGGATAAAGGTTGCGCA
AGCTTTACCGATACTTGAGCCTCGAAAATACCACTGCTCTGTATGCATAC
AAGTAGTTTTAAAAGTGGTTTCTGGGCAGGGATAATAGATTTACTGATGC
ATTGGGCTCTGTGAAAGGCTCACATGCTTGGACCCTAACTCCGTCCCTTG
CTGGTTAGATGCAAACCACGCGACAGGTCCGAGGCCAACGGGTGCATGAT
GGTGAAAAGACATCGGAGACAGAACGACGAGCCTTTGGTTCGTCTTGGTC
CGTCGTTGTCTACCGTCAAGAGTCATGCTGCTGTCATCGTTGTAGACGAC
AGCAGTGACGAGGAATGTGAAGGAGGAAGCAGGGAAGCGTCATGTTCCAA
GCGTCTACCAAAAACGACACCAATCGAAACACACGCCACGAATCGTTCAG
AAATGCTACGATTGCCGCCGTCAACAGCTTCCTTCCCAAAGGGGTGCCCG
CCGTTCATATCTCCTACTTCCGACTCGGCCCATCAACGTTTGCGTGTCCT
CCTAGCCGCCTTATCTTCCCCTTGCAATCATCCCTTCCCTTCCTCTCCTT
CCTCACGATCAATGGCCTCCCCGTCCTCGATTTTACCTTCCTCCCTGCTT
CCTTCCCTGGTCATTGTCGATTTGGATTACACGCTGTGGAAAGGCAATGT
GTCGGACCAAGTACCGCCCTTTGCGCGAAGCGAGCATCCGGACCGGGTGC
ACGTGCACGGATCCCGAGAGAGCTGGGGGGTCGGGGCGTCTGGACGGAGG
GGTGGGGCAGGGAGCATGAGGCGGGAAGGAGAAAGGCTTTTTTCCCTCTT
TCCAGAGGCCCGTCAGGTACATTGGGAGGGGCCTCGAGGGTAAGCATATG
TGCCCACGCCTTCGTGGATCGGAATGTGACTTTCGATTGGTGGAAGAGAG
GCTTCCGTGGATGTGGCCCATGCTTGGATCGCATCGTCGCAGATGCCTTG
GGCGGTTATGCGTTTCCATCTCTTCCTTAAATTCCTGTCCGCCCCCCCCC
ATGCGCCCGTGCCGTCGTTACAATCTTGGGTCTTTATGCCTTTTGTCTGT
ATCGTATCGTTCACGTGGCGTCTCGTTTCCCTCCCCCGCCGCTGGCTGTA
TCATCCCCTCTCTTTTTCCCCTACATGCCCCATATCAGGTCATAACGGCC
CTACATGGGGTCACCAGGCTGGCCATTGCCTCGCGGGCGCCCGACAGTAT
GGCTGCGGTCAAAATGCTCAAACTCATGGAGTTGCATGCTTTCTTCCGTC
TTCCTCTCTCCCAGTCTAGCCCGCCGAGAGGGCAGGGGGCGGATGAGAAG
ACGGAGACCCAAGAAGAAAGGGGAATAGGTCCACAGGAACCGCAGGAGTT
GATAGCGATTGCCAACGACGGATGGGGTAAAACGAAGCATTTGCGGGATA
TTCTCAGGTATGCCTTCTCCGTTCGGTGGAGAGAGGATGGATCAGATGAT
CGCGGTAGTCATCGGCGTTTCTCGGTGGATAGACTCCTGCTCTGACTCTA
CTGCTCTGCGCATTACTAAGTGTAATTTTCCGACTTCACATACTCAGGTG
GACCGGCGCACAGCCCCATGATGTCCTCTTTTTTGACGACCAGAAAGGCA
ATTTGGAAGGTAGTTCGGTTTTTGTCAACTGCATGAGCCGGTCCCCACGA
GCTACTGTATTTCTCATTTTTTTGGGAATGCCCCATGGTTCCCGCCTTGT
TGACTCATACGTAATGTACATTGTTCCGTGCATGGCATTTCATCCTAGCA
TACGCGGTACTGCTGTATTACGCGTTATATTGGGCGCAATCCAGATGGCA
AGGCCGCGTGCATGCATTCAATTTTTATCAATAGAGTTTTGACCATTTAC
TAATAACCAAACTTTTTGATTCCCTTTTTCCAAAAACATAATTCTTATTT
TTGTTAGATGCCAGAAGGCTCGGATGTTGCGCGCAGAGTGTCTCATGCGC
AGACGGCTTGTCCTGGGCGTCGTTGGAAAAGGGTTTGCGATTGTACAGGG
AGAAAGGACGGGCGAGATCGATTATGGCAAAGCACTTTGTCAAAAAATGA
back to topCoding sequence (CDS) from alignment at CM002461.1:1069175..1071774- >rna3726 ID=rna3726|Name=rna3726|organism=Nannochloropsis gaditana|type=CDS|length=5115bp|location=Sequence derived from alignment at CM002461.1:1069175..1071774- (Nannochloropsis gaditana)
ATGCCAGAAGGCTCGGATGTTGCGCGCAGAGTGTCTCATGCGCAGACGGC
TTGTCCTGGGCGTCGTTGGAAAAGGGTTTGCGATTGTACAGGGAGAAAGG
ACGGGCGAGATCGATTATGGCAAAGCACTTTGTCAAAAAATGAGTGGACC
GGCGCACAGCCCCATGATGTCCTCTTTTTTGACGACCAGAAAGGCAATTT
GGAAGGTCATAACGGCCCTACATGGGGTCACCAGGCTGGCCATTGCCTCG
CGGGCGCCCGACAGTATGGCTGCGGTCAAAATGCTCAAACTCATGGAGTT
GCATGCTTTCTTCCGTCTTCCTCTCTCCCAGTCTAGCCCGCCGAGAGGGC
AGGGGGCGGATGAGAAGACGGAGACCCAAGAAGAAAGGGGAATAGGTCCA
CAGGAACCGCAGGAGTTGATAGCGATTGCCAACGACGGATGGGGTAAAAC
GAAGCATTTGCGGGATATTCTCAGATGCAAACCACGCGACAGGTCCGAGG
CCAACGGGTGCATGATGGTGAAAAGACATCGGAGACAGAACGACGAGCCT
TTGGTTCGTCTTGGTCCGTCGTTGTCTACCGTCAAGAGTCATGCTGCTGT
CATCGTTGTAGACGACAGCAGTGACGAGGAATGTGAAGGAGGAAGCAGGG
AAGCGTCATGTTCCAAGCGTCTACCAAAAACGACACCAATCGAAACACAC
GCCACGAATCGTTCAGAAATGCTACGATTGCCGCCGTCAACAGCTTCCTT
CCCAAAGGGGTGCCCGCCGTTCATATCTCCTACTTCCGACTCGGCCCATC
AACGTTTGCGTGTCCTCCTAGCCGCCTTATCTTCCCCTTGCAATCATCCC
TTCCCTTCCTCTCCTTCCTCACGATCAATGGCCTCCCCGTCCTCGATTTT
ACCTTCCTCCCTGCTTCCTTCCCTGGTCATTGTCGATTTGGATTACACGC
TGTGGAAAGGCAATGTGTCGGACCAAATGACAAGACATATTCAAAAACAA
TGGCGCGCACGCTGCCGACAGAAATGCCAGAAGGCTCGGATGTTGCGCGC
AGAGTGTCTCATGCGCAGACGGCTTGTCCTGGGCGTCGTTGGAAAAGGGT
TTGCGATTGTACAGGGAGAAAGGACGGGCGAGATCGATTATGGCAAAGCA
CTTTGTCAAAAAATGAGTGGACCGGCGCACAGCCCCATGATGTCCTCTTT
TTTGACGACCAGAAAGGCAATTTGGAAGGTCATAACGGCCCTACATGGGG
TCACCAGGCTGGCCATTGCCTCGCGGGCGCCCGACAGTATGGCTGCGGTC
AAAATGCTCAAACTCATGGAGTTGCATGCTTTCTTCCGTCTTCCTCTCTC
CCAGTCTAGCCCGCCGAGAGGGCAGGGGGCGGATGAGAAGACGGAGACCC
AAGAAGAAAGGGGAATAGGTCCACAGGAACCGCAGGAGTTGATAGCGATT
GCCAACGACGGATGGGGTAAAACGAAGCATTTGCGGGATATTCTCAGATG
CAAACCACGCGACAGGTCCGAGGCCAACGGGTGCATGATGGTGAAAAGAC
ATCGGAGACAGAACGACGAGCCTTTGGTTCGTCTTGGTCCGTCGTTGTCT
ACCGTCAAGAGTCATGCTGCTGTCATCGTTGTAGACGACAGCAGTGACGA
GGAATGTGAAGGAGGAAGCAGGGAAGCGTCATGTTCCAAGCGTCTACCAA
AAACGACACCAATCGAAACACACGCCACGAATCGTTCAGAAATGCTACGA
TTGCCGCCGTCAACAGCTTCCTTCCCAAAGGGGTGCCCGCCGTTCATATC
TCCTACTTCCGACTCGGCCCATCAACGTTTGCGTGTCCTCCTAGCCGCCT
TATCTTCCCCTTGCAATCATCCCTTCCCTTCCTCTCCTTCCTCACGATCA
ATGGCCTCCCCGTCCTCGATTTTACCTTCCTCCCTGCTTCCTTCCCTGGT
CATTGTCGATTTGGATTACACGCTGTGGAAAGGCAATGTGTCGGACCAAA
TGACAAGACATATTCAAAAACAATGGCGCGCACGCTGCCGACAGAAATGC
CAGAAGGCTCGGATGTTGCGCGCAGAGTGTCTCATGCGCAGACGGCTTGT
CCTGGGCGTCGTTGGAAAAGGGTTTGCGATTGTACAGGGAGAAAGGACGG
GCGAGATCGATTATGGCAAAGCACTTTGTCAAAAAATGAGTGGACCGGCG
CACAGCCCCATGATGTCCTCTTTTTTGACGACCAGAAAGGCAATTTGGAA
GGTCATAACGGCCCTACATGGGGTCACCAGGCTGGCCATTGCCTCGCGGG
CGCCCGACAGTATGGCTGCGGTCAAAATGCTCAAACTCATGGAGTTGCAT
GCTTTCTTCCGTCTTCCTCTCTCCCAGTCTAGCCCGCCGAGAGGGCAGGG
GGCGGATGAGAAGACGGAGACCCAAGAAGAAAGGGGAATAGGTCCACAGG
AACCGCAGGAGTTGATAGCGATTGCCAACGACGGATGGGGTAAAACGAAG
CATTTGCGGGATATTCTCAGATGCAAACCACGCGACAGGTCCGAGGCCAA
CGGGTGCATGATGGTGAAAAGACATCGGAGACAGAACGACGAGCCTTTGG
TTCGTCTTGGTCCGTCGTTGTCTACCGTCAAGAGTCATGCTGCTGTCATC
GTTGTAGACGACAGCAGTGACGAGGAATGTGAAGGAGGAAGCAGGGAAGC
GTCATGTTCCAAGCGTCTACCAAAAACGACACCAATCGAAACACACGCCA
CGAATCGTTCAGAAATGCTACGATTGCCGCCGTCAACAGCTTCCTTCCCA
AAGGGGTGCCCGCCGTTCATATCTCCTACTTCCGACTCGGCCCATCAACG
TTTGCGTGTCCTCCTAGCCGCCTTATCTTCCCCTTGCAATCATCCCTTCC
CTTCCTCTCCTTCCTCACGATCAATGGCCTCCCCGTCCTCGATTTTACCT
TCCTCCCTGCTTCCTTCCCTGGTCATTGTCGATTTGGATTACACGCTGTG
GAAAGGCAATGTGTCGGACCAAATGACAAGACATATTCAAAAACAATGGC
GCGCACGCTGCCGACAGAAATGCCAGAAGGCTCGGATGTTGCGCGCAGAG
TGTCTCATGCGCAGACGGCTTGTCCTGGGCGTCGTTGGAAAAGGGTTTGC
GATTGTACAGGGAGAAAGGACGGGCGAGATCGATTATGGCAAAGCACTTT
GTCAAAAAATGAGTGGACCGGCGCACAGCCCCATGATGTCCTCTTTTTTG
ACGACCAGAAAGGCAATTTGGAAGGTCATAACGGCCCTACATGGGGTCAC
CAGGCTGGCCATTGCCTCGCGGGCGCCCGACAGTATGGCTGCGGTCAAAA
TGCTCAAACTCATGGAGTTGCATGCTTTCTTCCGTCTTCCTCTCTCCCAG
TCTAGCCCGCCGAGAGGGCAGGGGGCGGATGAGAAGACGGAGACCCAAGA
AGAAAGGGGAATAGGTCCACAGGAACCGCAGGAGTTGATAGCGATTGCCA
ACGACGGATGGGGTAAAACGAAGCATTTGCGGGATATTCTCAGATGCAAA
CCACGCGACAGGTCCGAGGCCAACGGGTGCATGATGGTGAAAAGACATCG
GAGACAGAACGACGAGCCTTTGGTTCGTCTTGGTCCGTCGTTGTCTACCG
TCAAGAGTCATGCTGCTGTCATCGTTGTAGACGACAGCAGTGACGAGGAA
TGTGAAGGAGGAAGCAGGGAAGCGTCATGTTCCAAGCGTCTACCAAAAAC
GACACCAATCGAAACACACGCCACGAATCGTTCAGAAATGCTACGATTGC
CGCCGTCAACAGCTTCCTTCCCAAAGGGGTGCCCGCCGTTCATATCTCCT
ACTTCCGACTCGGCCCATCAACGTTTGCGTGTCCTCCTAGCCGCCTTATC
TTCCCCTTGCAATCATCCCTTCCCTTCCTCTCCTTCCTCACGATCAATGG
CCTCCCCGTCCTCGATTTTACCTTCCTCCCTGCTTCCTTCCCTGGTCATT
GTCGATTTGGATTACACGCTGTGGAAAGGCAATGTGTCGGACCAAATGAC
AAGACATATTCAAAAACAATGGCGCGCACGCTGCCGACAGAAATGCCAGA
AGGCTCGGATGTTGCGCGCAGAGTGTCTCATGCGCAGACGGCTTGTCCTG
GGCGTCGTTGGAAAAGGGTTTGCGATTGTACAGGGAGAAAGGACGGGCGA
GATCGATTATGGCAAAGCACTTTGTCAAAAAATGAGTGGACCGGCGCACA
GCCCCATGATGTCCTCTTTTTTGACGACCAGAAAGGCAATTTGGAAGGTC
ATAACGGCCCTACATGGGGTCACCAGGCTGGCCATTGCCTCGCGGGCGCC
CGACAGTATGGCTGCGGTCAAAATGCTCAAACTCATGGAGTTGCATGCTT
TCTTCCGTCTTCCTCTCTCCCAGTCTAGCCCGCCGAGAGGGCAGGGGGCG
GATGAGAAGACGGAGACCCAAGAAGAAAGGGGAATAGGTCCACAGGAACC
GCAGGAGTTGATAGCGATTGCCAACGACGGATGGGGTAAAACGAAGCATT
TGCGGGATATTCTCAGATGCAAACCACGCGACAGGTCCGAGGCCAACGGG
TGCATGATGGTGAAAAGACATCGGAGACAGAACGACGAGCCTTTGGTTCG
TCTTGGTCCGTCGTTGTCTACCGTCAAGAGTCATGCTGCTGTCATCGTTG
TAGACGACAGCAGTGACGAGGAATGTGAAGGAGGAAGCAGGGAAGCGTCA
TGTTCCAAGCGTCTACCAAAAACGACACCAATCGAAACACACGCCACGAA
TCGTTCAGAAATGCTACGATTGCCGCCGTCAACAGCTTCCTTCCCAAAGG
GGTGCCCGCCGTTCATATCTCCTACTTCCGACTCGGCCCATCAACGTTTG
CGTGTCCTCCTAGCCGCCTTATCTTCCCCTTGCAATCATCCCTTCCCTTC
CTCTCCTTCCTCACGATCAATGGCCTCCCCGTCCTCGATTTTACCTTCCT
CCCTGCTTCCTTCCCTGGTCATTGTCGATTTGGATTACACGCTGTGGAAA
GGCAATGTGTCGGACCAAATGACAAGACATATTCAAAAACAATGGCGCGC
ACGCTGCCGACAGAA back to top
|