EWM26956.1, cds3717 (CDS) Nannochloropsis gaditana

Overview
NameEWM26956.1
Unique Namecds3717
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1071728..1071774 -
Alignment locationCM002461.1:1070565..1071066 -
Alignment locationCM002461.1:1069818..1070086 -
Alignment locationCM002461.1:1069616..1069677 -
Alignment locationCM002461.1:1069175..1069317 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26956.1
Producthad-like protein
Orig transcript idgnl|cribi|Naga_100304g6.3102.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1071728..1071774 -
CM002461.1supercontigCM002461.1:1070565..1071066 -
CM002461.1supercontigCM002461.1:1069818..1070086 -
CM002461.1supercontigCM002461.1:1069616..1069677 -
CM002461.1supercontigCM002461.1:1069175..1069317 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016791phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR024734MDP_1_eu
IPR010036MDP_1_eu_arc
IPR023214HAD-like_dom
Homology
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|585109110|gb|EWM26956.1| (had-like protein [Nannochloropsis gaditana])

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query:    1 MTRHIQKQWRARCRQKCKPRDRSEANGCMMVKRHRRQNDEPLVRLGPSLSTVKSHAAVIVVDDSSDEECEGGSREASCSKRLPKTTPIETHATNRSEMLRLPPSTASFPKGCPPFISPTSDSAHQRLRVLLAALSSPCNHPFPSSPSSRSMASPSSILPSSLLPSLVIVDLDYTLWKGNVSDQVITALHGVTRLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREKGRARSIMAKHFVKK 340
            MTRHIQKQWRARCRQKCKPRDRSEANGCMMVKRHRRQNDEPLVRLGPSLSTVKSHAAVIVVDDSSDEECEGGSREASCSKRLPKTTPIETHATNRSEMLRLPPSTASFPKGCPPFISPTSDSAHQRLRVLLAALSSPCNHPFPSSPSSRSMASPSSILPSSLLPSLVIVDLDYTLWKGNVSDQVITALHGVTRLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREKGRARSIMAKHFVKK
Sbjct:    1 MTRHIQKQWRARCRQKCKPRDRSEANGCMMVKRHRRQNDEPLVRLGPSLSTVKSHAAVIVVDDSSDEECEGGSREASCSKRLPKTTPIETHATNRSEMLRLPPSTASFPKGCPPFISPTSDSAHQRLRVLLAALSSPCNHPFPSSPSSRSMASPSSILPSSLLPSLVIVDLDYTLWKGNVSDQVITALHGVTRLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREKGRARSIMAKHFVKK 340          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|299115736|emb|CBN74301.1| (HAD-like protein [Ectocarpus siliculosus])

HSP 1 Score: 72.4034 bits (176), Expect = 6.821e-11
Identity = 59/194 (30.41%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  163 LPSLVIVDLDYTLWKGNVSDQV---ITALHGVTRLAIASRAPDSMAA-------------VKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGI-GPQEPQELIAIANDGWG-KTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREKGRARSIMAKHFV 338
            LP LV++DLD T+W     ++     T   G TR   +  A +  ++             V +L+ ++     RL ++  SP    GA         RGI G      L        G K KH ++I   TG +  D+LFFDD+K N++  RRLG     VS   GL++A++  GL+ YRE   +RS +   F 
Sbjct:   72 LPKLVVLDLDKTVWPVYCHEETRGPYTRCLGNTRFCDSESAVECYSSFGGKKVVRLFPDVVALLRCLQQQGSIRLAVASRSPIDEGGA--------ARGILGAVGLLGLFCCLEIHTGSKAKHFQNIHAATGVEYRDMLFFDDEKHNIKTVRRLGVTCIKVSKESGLTFAAVNAGLKEYREACLSRSSLRGWFT 257          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|1088686742|gb|OHE95123.1| (magnesium-dependent phosphatase-1 [Colletotrichum orchidophilum])

HSP 1 Score: 71.2478 bits (173), Expect = 8.071e-11
Identity = 68/219 (31.05%), Postives = 96/219 (43.84%), Query Frame = 0
Query:  141 PFPSSPSSRSMASPSSILPSSLLPSLVIVDLDYTLW------------KGNVSDQVITALHGVT-------------------RLAIASR--APDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            P  S+ +S S++ P  +     LP L++ DLDYTLW            K N +   +T  HG +                   ++A+ASR  APD   A  MLKL+ +          S+   G G  EKT+   E    P E    I  ++    K KH   I + TG    D+LFFDD+  N E    LG   Q V   DGL+W  +EKG+  +R++
Sbjct:   20 PSTSTTNSNSLSLPRILTDELPLPKLIVFDLDYTLWPFWVDTHVAGPLKANATHSAVTDRHGESFAFYQDVPRILYTLPLAGIKIAVASRTSAPD--LAKDMLKLLHVPP-------PSAEEGGSGKKEKTKKALEYFDAPLE----IYPSS----KIKHFETIFKKTGIAYTDMLFFDDESRNRE-TESLGVTMQLVR--DGLTWNEMEKGVAEWRKR 218          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|1214671681|gb|OWY95507.1| (Magnesium-dependent phosphatase-1 [Phytophthora megakarya])

HSP 1 Score: 69.3218 bits (168), Expect = 2.497e-10
Identity = 54/201 (26.87%), Postives = 88/201 (43.78%), Query Frame = 0
Query:  163 LPSLVIVDLDYTLWKGNVS--------------------DQVITALHGV---------------TRLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREKGR 328
            +P LV+ DLDYTLW+  +                     D+ ++ L  V               T++AIASR  +  AA + + L+E+           S  +G+G + KT          ++    + I   G  K  H +  ++ +  Q  D+LFFDD+  N++D  RLG   Q   C DG++W S  +G++ Y+E  R
Sbjct:   13 VPRLVVFDLDYTLWQPYIDVLNGGPFKKTHNPGVVLDRYDEELSLLPDVQKVLNVIETDPQFEGTKVAIASRTGEIQAAKECMGLIEV-----------SIKKGEGEEMKT---------LEDIASFVEIYPTG--KVAHFKKFIQNSDVQYEDMLFFDDEYRNIQDVSRLGVTCQ--FCHDGVTWKSWMEGMKAYQEAKR 189          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|347976231|ref|XP_003437445.1| (unnamed protein product [Podospora anserina S mat+] >gi|170940303|emb|CAP65530.1| unnamed protein product [Podospora anserina S mat+] >gi|681101993|emb|CDP31525.1| Putative Magnesium-dependent phosphatase 1 [Podospora anserina S mat+])

HSP 1 Score: 68.5514 bits (166), Expect = 8.194e-10
Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 0
Query:  152 ASPSSILPSSLLPSLVIVDLDYTLWKGNVSDQVITALHGVTRLAIASR-------APDSMAAVKMLKLMELHAFFRLPLSQSSPP----RGQGADEKTETQEERGIGPQEPQELIAIANDGWG---------KTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
             +PS +  S  LP+L+++DLDYTLW       +   +  ++   ++ R        PD+ A +++L   + +   RL ++  SP     R      +    E RG    +P+++I +   G G         K +H   I + TG +  D+LFFDD++ N E    +G   + V    GL W  LEKG++L+RE+
Sbjct:   30 TTPSWLTDSLPLPALIVLDLDYTLWPFYSDIHISPPIRSLSPFVLSDRNGEHFSLFPDAPAILRLLSSPQCN--IRLAVASKSPVGDLCREVLKSLRLPETEIRG----QPKKVIDVFTTGGGGGLEIYESSKLRHFEVIAKRTGVRYEDMLFFDDERPNFE-VESVGVTMKLVG-RQGLCWEELEKGIQLWRER 216          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|996578321|gb|KXH25743.1| (magnesium-dependent phosphatase-1 [Colletotrichum salicis])

HSP 1 Score: 66.2402 bits (160), Expect = 3.441e-9
Identity = 64/213 (30.05%), Postives = 90/213 (42.25%), Query Frame = 0
Query:  147 SSRSMASPSSILPSSLLPSLVIVDLDYTLW------------KGNVSDQVITALHGVT-------------------RLAIASR--APDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            +S S++ P  +     LP L++ DLDYTLW            K N +   +T  HG +                   ++A+ASR  APD   A  MLKL+ +          S+   G G  EKT+   E    P E             K KH   I + TG    D+LFFDD+  N E    LG   Q V   DG++W  +EKG+  +R++
Sbjct:    2 NSTSLSLPRILTDELPLPKLIVFDLDYTLWPFWVDTHVSGPLKANATHSAVTDRHGESFAFYQDVPRILYTLPLAGIKIAVASRTSAPD--LARDMLKLLHVPP-------PSAEEGGSGKKEKTKKALEYFDAPLEIYPS--------SKIKHFETIFKKTGIPFTDMLFFDDESRNRE-TESLGVTMQLVR--DGVTWNQIEKGVGEWRKR 194          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|1020442432|gb|KZL77702.1| (magnesium-dependent phosphatase [Colletotrichum tofieldiae])

HSP 1 Score: 65.4698 bits (158), Expect = 7.351e-9
Identity = 58/195 (29.74%), Postives = 84/195 (43.08%), Query Frame = 0
Query:  163 LPSLVIVDLDYTLW------------KGNVSDQVITALHGVT-------------------RLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            LP +++ DLDYTLW            K N +   +T  HG +                   ++A+ASR      A  MLKL+ +          S+   G G  EKT+   E   GP E    I  ++    K +H   I R TG    D+LFFDD+  N E    LG   Q V   DG++W  +E+G+  +R++
Sbjct:   42 LPKIIVFDLDYTLWPFWVDTHVAGPLKANATHSAVTDRHGESFAFYQDVPRILYTLPLAGIKVAVASRTSAPDLARDMLKLLHVPP-------PSAEEGGSGKKEKTKKALEYFDGPLE----IYPSS----KIRHFETIFRKTGIPFTDMLFFDDESRNRE-TESLGVTMQLVR--DGVTWNEIERGVTEWRKR 218          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|996588914|gb|KXH32834.1| (magnesium-dependent phosphatase-1 [Colletotrichum simmondsii])

HSP 1 Score: 65.0846 bits (157), Expect = 1.048e-8
Identity = 59/195 (30.26%), Postives = 83/195 (42.56%), Query Frame = 0
Query:  163 LPSLVIVDLDYTLW------------KGNVSDQVITALHGVT-------------------RLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            LP L++ DLDYTLW            K N +   +T  HG +                   ++A+ASR      A  MLKL+ +          S+   G G  EKT+   E    P E    I  ++    K KH   I + TG    D+LFFDD+  N E    LG   Q V   DG++W  +EKG+  +R++
Sbjct:   42 LPKLIVFDLDYTLWPFWVDTHVSGPLKANATHSAVTDRHGESFAFYQDVPRILYTLPLAGIKIAVASRTSAPDLARDMLKLLHVPP-------PSAEEGGSGKKEKTKRALEYFDAPLE----IYPSS----KIKHFETIFKKTGIPFTDMLFFDDESRNRE-TESLGVTMQLVR--DGVTWNEIEKGVAEWRKR 218          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|615434984|ref|XP_007589934.1| (magnesium-dependent phosphatase-1 [Colletotrichum fioriniae PJ7] >gi|588906945|gb|EXF86372.1| magnesium-dependent phosphatase-1 [Colletotrichum fioriniae PJ7] >gi|996636029|gb|KXH60589.1| magnesium-dependent phosphatase-1 [Colletotrichum nymphaeae SA-01])

HSP 1 Score: 65.0846 bits (157), Expect = 1.048e-8
Identity = 59/195 (30.26%), Postives = 83/195 (42.56%), Query Frame = 0
Query:  163 LPSLVIVDLDYTLW------------KGNVSDQVITALHGVT-------------------RLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGIGPQEPQELIAIANDGWGKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            LP L++ DLDYTLW            K N +   +T  HG +                   ++A+ASR      A  MLKL+ +          S+   G G  EKT+   E    P E    I  ++    K KH   I + TG    D+LFFDD+  N E    LG   Q V   DG++W  +EKG+  +R++
Sbjct:   42 LPKLIVFDLDYTLWPFWVDTHVSGPLKANATHSAVTDRHGESFAFYQDVPRILYTLPLAGIKIAVASRTSAPDLARDMLKLLHVPP-------PSAEEGGSGKKEKTKRALEYFDAPLE----IYPSS----KIKHFETIFKKTGIPFTDMLFFDDESRNRE-TESLGVTMQLVR--DGVTWNEIEKGVAEWRKR 218          
BLAST of EWM26956.1 vs. NCBI_GenBank
Match: gi|573989725|ref|XP_006672783.1| (magnesium dependent phosphatase [Cordyceps militaris CM01] >gi|346319727|gb|EGX89328.1| magnesium dependent phosphatase [Cordyceps militaris CM01])

HSP 1 Score: 64.6994 bits (156), Expect = 1.174e-8
Identity = 62/205 (30.24%), Postives = 91/205 (44.39%), Query Frame = 0
Query:  136 SPCNHPFPSSPSSRSMASPSSILPSSL-LPSLVIVDLDYTLWKGNVSDQVITALHG-VTRLAIASRAPDSMAAVKMLKLMELHAFFRLPLSQSSPPRGQGADEKTETQEERGI-------GPQEPQELIAIANDGW-----GKTKHLRDILRWTGAQPHDVLFFDDQKGNLEDARRLGCCAQSVSCADGLSWASLEKGLRLYREK 326
            S  N   P SP+   +  P+S+   SL LP L++ DLDYTLW   V       L       A   R  +S A    +  +  H    LP   S+P +   A   + T   R +       G + P+    + + G       K +H   + R TG    D+LFFDD+  NLE   +LG   + V   DG+SWA +EKG+  +R++
Sbjct:   12 SATNSATPRSPTDGGV--PASLADPSLPLPRLMVFDLDYTLWPYWVDTHPTPPLKANAAHTAATDRYGESFAFYDDVPSILQH----LPRGASAPIKLGVASRTSATAIARDLLKMLHVPGQKAPRRAGDVFDAGMEIYPGSKIRHFETLQRRTGVAYEDMLFFDDESRNLE-TEKLGLTMRLVR--DGVSWAEIEKGVEEWRKR 207          
The following BLAST results are available for this feature:
BLAST of EWM26956.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109110|gb|EWM26956.1|0.000e+0100.00had-like protein [Nannochloropsis gaditana][more]
gi|299115736|emb|CBN74301.1|6.821e-1130.41HAD-like protein [Ectocarpus siliculosus][more]
gi|1088686742|gb|OHE95123.1|8.071e-1131.05magnesium-dependent phosphatase-1 [Colletotrichum ... [more]
gi|1214671681|gb|OWY95507.1|2.497e-1026.87Magnesium-dependent phosphatase-1 [Phytophthora me... [more]
gi|347976231|ref|XP_003437445.1|8.194e-1028.21unnamed protein product [Podospora anserina S mat+... [more]
gi|996578321|gb|KXH25743.1|3.441e-930.05magnesium-dependent phosphatase-1 [Colletotrichum ... [more]
gi|1020442432|gb|KZL77702.1|7.351e-929.74magnesium-dependent phosphatase [Colletotrichum to... [more]
gi|996588914|gb|KXH32834.1|1.048e-830.26magnesium-dependent phosphatase-1 [Colletotrichum ... [more]
gi|615434984|ref|XP_007589934.1|1.048e-830.26magnesium-dependent phosphatase-1 [Colletotrichum ... [more]
gi|573989725|ref|XP_006672783.1|1.174e-830.24magnesium dependent phosphatase [Cordyceps militar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3726rna3726Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications