rna3725, rna3725 (mRNA) Nannochloropsis gaditana

Overview
Namerna3725
Unique Namerna3725
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length872
Alignment locationCM002461.1:1066662..1068614 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100304g7.3098.mrna
Orig protein idgnl|cribi|Naga_100304g7.3098
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1066662..1068614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100304g7gene3589Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26952.1cds3716Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3725rna3725-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3725 ID=rna3725|Name=rna3725|organism=Nannochloropsis gaditana|type=mRNA|length=872bp
GGGGGCCTACCGCGAAGAGAAGGGAGGCACAATGCAACGCGTCCTTTGCT
CCATGTCGGGATAGAAAATGACAGGGACATAGCGAGGCGTACCATGCCAT
GTGCTGGACGCCAATGCCGATGTTTCGATCCTATTCACGACCCCTCTGTC
CCCTGAGTGGCCTGCATGCCGCGTCTTGCTGCCGAAGCTCCTGGCCTGGA
GGACACGATGGAGCAACCGTCCCACTGAAGATGTTTTCGCTTTTTGTTGT
GCTCTTTCCTTTTCCTCCTTATGAGAAATTGACTGAACCTTCTTCCGCTT
TCCGTTTCGCTCCCTCCTCCTCCTCCTCGGAAAACCTTTCCCCCCCGCTC
CAGGAGTTCCGGGGGCACTCCTCCTTTGTGAACTGCATCTGTTTCACCCA
AGACGGGAGCCGCCTCTTGACTGGCAGCAGCGACGGCACGGTCAAAGTGT
GGGACGCCCGGAGCAGCGAATGCCTCCACACCTTCCGACCGGGGGTGGAG
TCCGCGGTCGATCTGGAGGCGATGGTGCATACGGTCCTGCCCTTGCCAGG
GGGAGCTGACTTGTTTTTTATCGCCAACCGGACCTCCACGGCCTATGTGA
CGACGGCACAGGGGCAGGTGGTGAAAAGGATGTCGAGCGGGAAGAAAGTA
GGGGGGGATTTCGCCGCGGCCGCCCTGAGTCCCAAGGGTACTTTTGCGCA
TTGTGCGGGGGAGGACGGGATAGTGTATTCTTTTCAGCTGGGGAAAGGGG
ATTTGGAAAGCTTTGTGAAGGTGGGGGAGAAGGAAGTGATCGGGGTGGCC
CACCACCCGCACCGGAATTTGGTGGTGACGTTTGGGGACGAAGGCGTGCT
CAAGGTGTGGAGGGCGTGAGGG
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protein sequence of rna3725

>rna3725-protein ID=rna3725-protein|Name=rna3725|organism=Nannochloropsis gaditana|type=polypeptide|length=650bp
MLLGLINLAPRQSGGFAHLEDDVDIESKVTTGNANRHGRERNPGPFIMAL
TSPTCSVAGLASAQSRQTVGAITHKHAPTRDKQKQEVKQVPVFTKAAESS
SMLCTVYEDRPLENADVISPPQGREKRSVTTKPIPYWSITRLSLPAGSVY
LLLTFLLHSMHTSVLTWILSSPPSSTFPQGGSSPTSFLAAATIFALPFAF
YLHRADLGRLREVQVKEWWALVAVTVFGPLLTSRLLLAGLVKTNVPVTSV
LSRVDILVLLICHTWADRSSSRVSRRWSFLSDGSSAMGREGQAEDEQEEQ
EVGEKAAAAETETTRGKSQCPLPLNDSVGEERRLFSPLRDPREGWWLGSG
VLLLFLGAVLSFLTSDPQGQGDNKGIDTQPTGALVSLPAFQGRACLVLSA
LCFALAQELTRMYLSTVPAGLCAVGRLCLAGFGFHVLAWAESGGSALAGI
YEPRHWLTLVGYGPFFLWGLHYLWFQSLTALASASPSFPTSPPPSSFSFP
GNPFLFLAFSCSLVVELFWSRLLLGTRVTMGESVSAALTLTGCLCLWKKR
DRREGEGDGGREGEGEGEGGREGGGGARRRGPGGVTSRREDEGGDVEGGD
RRGKEDQKPQTWIGGRQKGRRDGAREGARQAVAGRGVEPAQEIALRFRLV
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mRNA from alignment at CM002461.1:1066662..1068614-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3725 ID=rna3725|Name=rna3725|organism=Nannochloropsis gaditana|type=mRNA|length=1953bp|location=Sequence derived from alignment at CM002461.1:1066662..1068614- (Nannochloropsis gaditana)
ATGCTGCTTGGCTTGATTAATCTGGCCCCCCGGCAGAGCGGTGGCTTTGC
CCATCTAGAAGATGACGTAGATATAGAATCTAAAGTAACGACGGGGAATG
CAAATCGGCACGGTAGGGAAAGAAATCCCGGCCCTTTTATAATGGCATTG
ACCTCTCCCACATGCTCCGTAGCTGGCCTAGCCTCAGCTCAAAGTAGACA
GACCGTGGGTGCGATAACCCATAAACACGCGCCCACACGAGACAAACAGA
AACAAGAGGTCAAGCAAGTCCCGGTTTTTACGAAGGCTGCCGAAAGCAGC
TCAATGCTCTGCACGGTGTACGAAGACAGACCACTGGAAAACGCGGACGT
GATATCCCCACCTCAGGGGAGAGAAAAGCGAAGCGTCACGACCAAGCCGA
TTCCTTACTGGTCCATAACCAGGCTTAGCCTGCCTGCAGGCAGCGTATAC
CTCCTACTTACCTTTCTCCTTCACTCCATGCACACCTCGGTGTTGACTTG
GATCCTGTCGTCTCCGCCGTCCTCGACCTTCCCTCAGGGGGGTTCCTCTC
CGACCTCTTTCCTCGCTGCTGCCACGATCTTCGCCCTTCCTTTCGCGTTC
TATCTCCATCGAGCAGATCTAGGTCGCCTGCGCGAGGTGCAGGTCAAGGA
ATGGTGGGCCCTGGTGGCGGTGACCGTCTTCGGCCCGCTCTTAACATCCC
GCCTCCTCCTCGCTGGCCTCGTAAAGACAAACGTCCCCGTCACAAGCGTG
CTAAGCCGCGTGGACATCCTTGTGCTCCTCATCTGCCACACCTGGGCGGA
TCGCTCTTCGAGCCGGGTGTCGCGGCGGTGGTCATTCCTGTCGGACGGAA
GTAGCGCGATGGGGAGGGAGGGGCAGGCGGAAGACGAGCAAGAGGAGCAG
GAGGTGGGAGAGAAGGCGGCAGCTGCTGAGACTGAGACCACGAGGGGCAA
ATCTCAATGCCCGCTCCCACTGAACGACAGCGTTGGGGAGGAACGAAGGC
TTTTCTCCCCATTGCGGGATCCTCGTGAGGGGTGGTGGCTCGGCAGCGGC
GTCCTCTTGCTCTTCCTAGGTGCAGTCCTGTCATTTCTCACAAGCGATCC
ACAAGGACAAGGAGACAACAAAGGGATCGACACGCAGCCTACGGGGGCTC
TCGTCTCCCTCCCTGCCTTCCAGGGTCGAGCCTGCTTGGTCCTGAGTGCC
CTTTGCTTTGCCTTGGCCCAAGAACTTACCCGGATGTACCTCTCGACCGT
TCCCGCCGGGCTCTGTGCGGTGGGACGTCTCTGCCTCGCAGGCTTCGGGT
TCCATGTTCTGGCCTGGGCGGAAAGCGGGGGCAGCGCGCTCGCCGGCATC
TACGAACCTCGGCATTGGTTGACACTGGTTGGCTATGGCCCGTTTTTCCT
ATGGGGCCTCCACTACCTCTGGTTCCAGTCCCTGACCGCCTTGGCTTCCG
CTTCCCCCTCCTTCCCGACCTCCCCCCCGCCCTCCTCCTTCTCCTTCCCC
GGGAACCCCTTCCTCTTCCTCGCCTTCTCTTGCTCCCTGGTTGTCGAACT
CTTTTGGAGCCGGCTGTTGCTGGGGACCCGCGTCACTATGGGGGAGAGTG
TGAGTGCGGCGCTGACACTAACAGGATGTCTGTGCCTGTGGAAAAAAAGG
GACAGGAGGGAGGGAGAGGGGGATGGCGGGAGGGAGGGAGAGGGGGAGGG
GGAGGGAGGGAGGGAGGGAGGGGGAGGAGCTCGAAGGAGGGGGCCGGGGG
GGGTGACAAGCAGGAGGGAGGACGAGGGCGGGGACGTGGAAGGAGGAGAC
AGAAGAGGCAAAGAGGACCAAAAGCCACAGACATGGATCGGAGGGAGGCA
AAAAGGCAGGAGGGATGGCGCGAGGGAGGGTGCGCGGCAAGCCGTGGCCG
GGCGCGGAGTCGAACCCGCGCAGGAAATAGCCTTGCGGTTTCGGTTGGTA
TGA
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Coding sequence (CDS) from alignment at CM002461.1:1066662..1068614-

>rna3725 ID=rna3725|Name=rna3725|organism=Nannochloropsis gaditana|type=CDS|length=1953bp|location=Sequence derived from alignment at CM002461.1:1066662..1068614- (Nannochloropsis gaditana)
ATGCTGCTTGGCTTGATTAATCTGGCCCCCCGGCAGAGCGGTGGCTTTGC
CCATCTAGAAGATGACGTAGATATAGAATCTAAAGTAACGACGGGGAATG
CAAATCGGCACGGTAGGGAAAGAAATCCCGGCCCTTTTATAATGGCATTG
ACCTCTCCCACATGCTCCGTAGCTGGCCTAGCCTCAGCTCAAAGTAGACA
GACCGTGGGTGCGATAACCCATAAACACGCGCCCACACGAGACAAACAGA
AACAAGAGGTCAAGCAAGTCCCGGTTTTTACGAAGGCTGCCGAAAGCAGC
TCAATGCTCTGCACGGTGTACGAAGACAGACCACTGGAAAACGCGGACGT
GATATCCCCACCTCAGGGGAGAGAAAAGCGAAGCGTCACGACCAAGCCGA
TTCCTTACTGGTCCATAACCAGGCTTAGCCTGCCTGCAGGCAGCGTATAC
CTCCTACTTACCTTTCTCCTTCACTCCATGCACACCTCGGTGTTGACTTG
GATCCTGTCGTCTCCGCCGTCCTCGACCTTCCCTCAGGGGGGTTCCTCTC
CGACCTCTTTCCTCGCTGCTGCCACGATCTTCGCCCTTCCTTTCGCGTTC
TATCTCCATCGAGCAGATCTAGGTCGCCTGCGCGAGGTGCAGGTCAAGGA
ATGGTGGGCCCTGGTGGCGGTGACCGTCTTCGGCCCGCTCTTAACATCCC
GCCTCCTCCTCGCTGGCCTCGTAAAGACAAACGTCCCCGTCACAAGCGTG
CTAAGCCGCGTGGACATCCTTGTGCTCCTCATCTGCCACACCTGGGCGGA
TCGCTCTTCGAGCCGGGTGTCGCGGCGGTGGTCATTCCTGTCGGACGGAA
GTAGCGCGATGGGGAGGGAGGGGCAGGCGGAAGACGAGCAAGAGGAGCAG
GAGGTGGGAGAGAAGGCGGCAGCTGCTGAGACTGAGACCACGAGGGGCAA
ATCTCAATGCCCGCTCCCACTGAACGACAGCGTTGGGGAGGAACGAAGGC
TTTTCTCCCCATTGCGGGATCCTCGTGAGGGGTGGTGGCTCGGCAGCGGC
GTCCTCTTGCTCTTCCTAGGTGCAGTCCTGTCATTTCTCACAAGCGATCC
ACAAGGACAAGGAGACAACAAAGGGATCGACACGCAGCCTACGGGGGCTC
TCGTCTCCCTCCCTGCCTTCCAGGGTCGAGCCTGCTTGGTCCTGAGTGCC
CTTTGCTTTGCCTTGGCCCAAGAACTTACCCGGATGTACCTCTCGACCGT
TCCCGCCGGGCTCTGTGCGGTGGGACGTCTCTGCCTCGCAGGCTTCGGGT
TCCATGTTCTGGCCTGGGCGGAAAGCGGGGGCAGCGCGCTCGCCGGCATC
TACGAACCTCGGCATTGGTTGACACTGGTTGGCTATGGCCCGTTTTTCCT
ATGGGGCCTCCACTACCTCTGGTTCCAGTCCCTGACCGCCTTGGCTTCCG
CTTCCCCCTCCTTCCCGACCTCCCCCCCGCCCTCCTCCTTCTCCTTCCCC
GGGAACCCCTTCCTCTTCCTCGCCTTCTCTTGCTCCCTGGTTGTCGAACT
CTTTTGGAGCCGGCTGTTGCTGGGGACCCGCGTCACTATGGGGGAGAGTG
TGAGTGCGGCGCTGACACTAACAGGATGTCTGTGCCTGTGGAAAAAAAGG
GACAGGAGGGAGGGAGAGGGGGATGGCGGGAGGGAGGGAGAGGGGGAGGG
GGAGGGAGGGAGGGAGGGAGGGGGAGGAGCTCGAAGGAGGGGGCCGGGGG
GGGTGACAAGCAGGAGGGAGGACGAGGGCGGGGACGTGGAAGGAGGAGAC
AGAAGAGGCAAAGAGGACCAAAAGCCACAGACATGGATCGGAGGGAGGCA
AAAAGGCAGGAGGGATGGCGCGAGGGAGGGTGCGCGGCAAGCCGTGGCCG
GGCGCGGAGTCGAACCCGCGCAGGAAATAGCCTTGCGGTTTCGGTTGGTA
TGA
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Synonyms
Publications