EWM26952.1, cds3716 (CDS) Nannochloropsis gaditana

Overview
NameEWM26952.1
Unique Namecds3716
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1066662..1068614 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26952.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100304g7.3098.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1066662..1068614 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM26952.1 vs. NCBI_GenBank
Match: gi|585109106|gb|EWM26952.1| (hypothetical protein Naga_100304g7 [Nannochloropsis gaditana])

HSP 1 Score: 1307.74 bits (3383), Expect = 0.000e+0
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0 
Query:    1 MLLGLINLAPRQSGGFAHLEDDVDIESKVTTGNANRHGRERNPGPFIMALTSPTCSVAGLASAQSRQTVGAITHKHAPTRDKQKQEVKQVPVFTKAAESSSMLCTVYEDRPLENADVISPPQGREKRSVTTKPIPYWSITRLSLPAGSVYLLLTFLLHSMHTSVLTWILSSPPSSTFPQGGSSPTSFLAAATIFALPFAFYLHRADLGRLREVQVKEWWALVAVTVFGPLLTSRLLLAGLVKTNVPVTSVLSRVDILVLLICHTWADRSSSRVSRRWSFLSDGSSAMGREGQAEDEQEEQEVGEKAAAAETETTRGKSQCPLPLNDSVGEERRLFSPLRDPREGWWLGSGVLLLFLGAVLSFLTSDPQGQGDNKGIDTQPTGALVSLPAFQGRACLVLSALCFALAQELTRMYLSTVPAGLCAVGRLCLAGFGFHVLAWAESGGSALAGIYEPRHWLTLVGYGPFFLWGLHYLWFQSLTALASASPSFPTSPPPSSFSFPGNPFLFLAFSCSLVVELFWSRLLLGTRVTMGESVSAALTLTGCLCLWKKRDRREGEGDGGREGEGEGEGGREGGGGARRRGPGGVTSRREDEGGDVEGGDRRGKEDQKPQTWIGGRQKGRRDGAREGARQAVAGRGVEPAQEIALRFRLV 650
            MLLGLINLAPRQSGGFAHLEDDVDIESKVTTGNANRHGRERNPGPFIMALTSPTCSVAGLASAQSRQTVGAITHKHAPTRDKQKQEVKQVPVFTKAAESSSMLCTVYEDRPLENADVISPPQGREKRSVTTKPIPYWSITRLSLPAGSVYLLLTFLLHSMHTSVLTWILSSPPSSTFPQGGSSPTSFLAAATIFALPFAFYLHRADLGRLREVQVKEWWALVAVTVFGPLLTSRLLLAGLVKTNVPVTSVLSRVDILVLLICHTWADRSSSRVSRRWSFLSDGSSAMGREGQAEDEQEEQEVGEKAAAAETETTRGKSQCPLPLNDSVGEERRLFSPLRDPREGWWLGSGVLLLFLGAVLSFLTSDPQGQGDNKGIDTQPTGALVSLPAFQGRACLVLSALCFALAQELTRMYLSTVPAGLCAVGRLCLAGFGFHVLAWAESGGSALAGIYEPRHWLTLVGYGPFFLWGLHYLWFQSLTALASASPSFPTSPPPSSFSFPGNPFLFLAFSCSLVVELFWSRLLLGTRVTMGESVSAALTLTGCLCLWKKRDRREGEGDGGREGEGEGEGGREGGGGARRRGPGGVTSRREDEGGDVEGGDRRGKEDQKPQTWIGGRQKGRRDGAREGARQAVAGRGVEPAQEIALRFRLV
Sbjct:    1 MLLGLINLAPRQSGGFAHLEDDVDIESKVTTGNANRHGRERNPGPFIMALTSPTCSVAGLASAQSRQTVGAITHKHAPTRDKQKQEVKQVPVFTKAAESSSMLCTVYEDRPLENADVISPPQGREKRSVTTKPIPYWSITRLSLPAGSVYLLLTFLLHSMHTSVLTWILSSPPSSTFPQGGSSPTSFLAAATIFALPFAFYLHRADLGRLREVQVKEWWALVAVTVFGPLLTSRLLLAGLVKTNVPVTSVLSRVDILVLLICHTWADRSSSRVSRRWSFLSDGSSAMGREGQAEDEQEEQEVGEKAAAAETETTRGKSQCPLPLNDSVGEERRLFSPLRDPREGWWLGSGVLLLFLGAVLSFLTSDPQGQGDNKGIDTQPTGALVSLPAFQGRACLVLSALCFALAQELTRMYLSTVPAGLCAVGRLCLAGFGFHVLAWAESGGSALAGIYEPRHWLTLVGYGPFFLWGLHYLWFQSLTALASASPSFPTSPPPSSFSFPGNPFLFLAFSCSLVVELFWSRLLLGTRVTMGESVSAALTLTGCLCLWKKRDRREGEGDGGREGEGEGEGGREGGGGARRRGPGGVTSRREDEGGDVEGGDRRGKEDQKPQTWIGGRQKGRRDGAREGARQAVAGRGVEPAQEIALRFRLV 650
The following BLAST results are available for this feature:
BLAST of EWM26952.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109106|gb|EWM26952.1|0.000e+0100.00hypothetical protein Naga_100304g7 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3725rna3725Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications