rna3722, rna3722 (mRNA) Nannochloropsis gaditana

Overview
Namerna3722
Unique Namerna3722
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length964
Alignment locationCM002461.1:1057128..1058602 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101032g1.3523.mrna
Orig protein idgnl|cribi|Naga_101032g1.3523
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1057128..1058602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101032g1gene3586Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3722rna3722-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26960.1cds3713Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3722 ID=rna3722|Name=rna3722|organism=Nannochloropsis gaditana|type=mRNA|length=964bp
CAACGCCAACCGCACCCGTTACCTCGAACTCACCAGGAGCCCGCACAGAA
GAAGAAGCGACCACCGCGGCCCCTAGCCATTTTCCCGCCCAAGAAAAAGG
GCGGGAAGGAGCAGGAGCAGGGAGGGGAGAAGGTAACGCTCGCGCCCTCC
GCCGTGGGCAGCACGCAGAAGCGGAGAAGGAAGGATTGGGAAGGAAGCTT
TCGAGGGGTCGATGGCGACTTTCAGGATACCCGGAAGCGGGCTCGGGGGC
GAGGACAGGATGGGCCTAGGCAGAGAAGGAAAAACGCCATGGGTGGGGAG
AGGGGGGTCATCATTGATTTTTGCCAGTGAGCTCGCCGATTGCATTGATC
GGGGAGCGAGGCCGGAGGCCGCCCGTGGGGCGTGACGGTCCCCGTGACGA
GGACGATAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGTCAAGCGGTG
GAATGTCCGGACAACATATTGCGAGTTGTGGGGCGACGCCGCGAGGGGTG
CTGCGACGTCGATTTTGTGTCAACGACGTGACGAGTGAGAGGGCATTGGC
AGGCGTGGTGTCCACTGTCCAGCGGGAAAGCTTGGTGCATGCAAAATGAC
GAACGTGCAAACAGCTTCGTGCATGCAAGGAAAGAAGAAAGTGATGAGGT
GGGAAGGAAGGGTGTGGAGCGAAAGGGGTGCAGGAGGTAGCAGGAGGTGG
GGGGATGAGATGGCGGGGAAGACAAAGACTGATGAATGTGGAAGATCGGG
GACGTGCGTTGGAAGGGAGTGTGCATGGGCGACAGGCCTGTGCCGACTAG
GATCGAGAAAAGTGGGAGCAGAATGATACTTAAAATTCAAAATTTCAAAA
AAGGAAAACTCCGCCGGTCCACCGAAAGCCAACGCCATGCGACGCCCGGG
TATCTGGCCCTTCC
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protein sequence of rna3722

>rna3722-protein ID=rna3722-protein|Name=rna3722|organism=Nannochloropsis gaditana|type=polypeptide|length=188bp
MAALFEAFIDSAISLLPPGIPPPLPIFNRISNTVRFGMGKAPRGRKGGRS
KGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNG
HAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAIL
KTLTPGTPRETREENIASPARVTDGIFPNVASTFWKKR
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mRNA from alignment at CM002461.1:1057128..1058602-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3722 ID=rna3722|Name=rna3722|organism=Nannochloropsis gaditana|type=mRNA|length=1475bp|location=Sequence derived from alignment at CM002461.1:1057128..1058602- (Nannochloropsis gaditana)
ACTGAGAACGGGCGATGGCGTGTCATAGATTCTGGAATAGTATGGAAGAG
GGTGGAGGGTAAAGATGGAGCTGAAGAGAGACGACTCCATGGCAGCGATA
TGCTCAGGCGCACCAGCCGCCTTTAATGCGAGGTTTCTCTACCACAATAC
CGCGACGAACTCAAGGGAAATAGCATCTTGTATAGAAACTTGAAAGTGCT
TTGATGGCAGACAGCGATGGCTGCCCTTTTTGAGGCGTTTATTGATTCTG
CTATCTCTCTTCTACCTCCTGGCATACCTCCCCCCCTCCCCATTTTTAAC
CGCATATCAAATACAGTCCGCTTCGGTATGGGTAAAGCCCCACGCGGTCG
AAAAGGGGGACGCAGTAAAGGAGGGCGTTATTTTGCGCCCAAAGCCCGCG
GCGAGGGCTTGACCAAAAGACAGGTGCGTCCTTTGGGAAAAAATCTCGGA
ACCCCGTCTCATTTTTTTCCTTGTTTCCTGCGGGCCATGGTACAACTTCC
TAAACCGGGCAGGATTTTCGACGCTTGGCCTGTCTGTGGAATGTGATGGC
GCTGAATGTACACCCGAGCACTTGCTCCTGGGACGGATATTCCCTTTGAT
GGTTGTTTGATTTTCCTATTCCAGTGCACACAGCGGCCCCCACCTCAGCA
CTATCCCCCACCGGGTTCCACGGCGAAAAGAAAAGGTCGTGCCCGCAAGC
AGGGCGACCGAAATGGCCACGCATTCAGCAACGACTACCGATCGCGCGAT
AGGGGCTTTGTTCTGGCGCCCAAAAGCCACCAGAAAGGCGGGAATTTGTT
CGACGTGATGCCCGTGGGGGTGACGCGGCTAAAGAAGAGCGAAAAGAAGG
TGGGGGTGGCCATCCTAAAAACATTGACACCCGGTACGCCGAGGGAGACA
AGGGAAGAGAATATCGCTAGCCCTGCACGGGTAACGGATGGCATTTTCCC
CAACGTAGCTAGCACATTTTGGAAGAAGAGATAGAGGACTGCCACGTTCA
TGCATGCCACTCCCTCCCTCCCTTCCTCCCCCTCCTCCCCCTCCTCTCCC
TCCCTCCCTCCCTCCCTTCCTCCCCCTGGTCCCACTCCCTCCCTCCCTTC
CTCCCCCCTCCTTAGCCCTACCCTCCGGACCTCCCCCTCCATGGAGTCAA
ATCGACAAGCGCCTCGGCCCCGAGCCCCTCCTCCTCCAGGAATGTCCCTG
GCTCGCCCCCGTCCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTT
CCTCCCTCCCTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCT
CCCTCCCTTCCTCCCCCCCTTTCTCCCCTCCGCCCTCCCTCCATGACGAG
CTCCTTGCCTTCCAACGCTACGCTTCCTTGACGCCGATGGAGCAACGTGC
ACGTATAAAGTGGTGGAGGCCTTGAACAACCTGATAAAGGTGCGATCTTG
CTCCCTCCCTCCCTCCCTCCCTCCC
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Coding sequence (CDS) from alignment at CM002461.1:1057128..1058602-

>rna3722 ID=rna3722|Name=rna3722|organism=Nannochloropsis gaditana|type=CDS|length=1134bp|location=Sequence derived from alignment at CM002461.1:1057128..1058602- (Nannochloropsis gaditana)
TGCACACAGCGGCCCCCACCTCAGCACTATCCCCCACCGGGTTCCACGGC
GAAAAGAAAAGGTCGTGCCCGCAAGCAGGGCGACCGAAATGGCCACGCAT
TCAGCAACGACTACCGATCGCGCGATAGGGGCTTTGTTCTGGCGCCCAAA
AGCCACCAGAAAGGCGGGAATTTGTTCGACGTGATGCCCGTGGGGGTGAC
GCGGCTAAAGAAGAGCGAAAAGAAGGTGGGGGTGGCCATCCTAAAAACAT
TGACACCCGGTACGCCGAGGGAGACAAGGGAAGAGAATATCGCTAGCCCT
GCACGGGTAACGGATGGCATTTTCCCCAACGTAGCTAGCACATTTTGGAA
GAAGAGATAGATGGCTGCCCTTTTTGAGGCGTTTATTGATTCTGCTATCT
CTCTTCTACCTCCTGGCATACCTCCCCCCCTCCCCATTTTTAACCGCATA
TCAAATACAGTCCGCTTCGGTATGGGTAAAGCCCCACGCGGTCGAAAAGG
GGGACGCAGTAAAGGAGGGCGTTATTTTGCGCCCAAAGCCCGCGGCGAGG
GCTTGACCAAAAGACAGTGCACACAGCGGCCCCCACCTCAGCACTATCCC
CCACCGGGTTCCACGGCGAAAAGAAAAGGTCGTGCCCGCAAGCAGGGCGA
CCGAAATGGCCACGCATTCAGCAACGACTACCGATCGCGCGATAGGGGCT
TTGTTCTGGCGCCCAAAAGCCACCAGAAAGGCGGGAATTTGTTCGACGTG
ATGCCCGTGGGGGTGACGCGGCTAAAGAAGAGCGAAAAGAAGGTGGGGGT
GGCCATCCTAAAAACATTGACACCCGGTACGCCGAGGGAGACAAGGGAAG
AGAATATCGCTAGCCCTGCACGGGTAACGGATGGCATTTTCCCCAACGTA
GCTAGCACATTTTGGAAGAAGAGATAGATGGCTGCCCTTTTTGAGGCGTT
TATTGATTCTGCTATCTCTCTTCTACCTCCTGGCATACCTCCCCCCCTCC
CCATTTTTAACCGCATATCAAATACAGTCCGCTTCGGTATGGGTAAAGCC
CCACGCGGTCGAAAAGGGGGACGCAGTAAAGGAGGGCGTTATTTTGCGCC
CAAAGCCCGCGGCGAGGGCTTGACCAAAAGACAG
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Synonyms
Publications