EWM26960.1, cds3713 (CDS) Nannochloropsis gaditana

Overview
NameEWM26960.1
Unique Namecds3713
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1058180..1058386 -
Alignment locationCM002461.1:1057619..1057978 -

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Properties
Property NameValue
Protein idEWM26960.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101032g1.3523.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1058180..1058386 -
CM002461.1supercontigCM002461.1:1057619..1057978 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26960.1 vs. NCBI_GenBank
Match: gi|585109116|gb|EWM26960.1| (hypothetical protein Naga_101032g1 [Nannochloropsis gaditana])

HSP 1 Score: 379.407 bits (973), Expect = 3.473e-133
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:    1 MAALFEAFIDSAISLLPPGIPPPLPIFNRISNTVRFGMGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTPGTPRETREENIASPARVTDGIFPNVASTFWKKR 188
            MAALFEAFIDSAISLLPPGIPPPLPIFNRISNTVRFGMGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTPGTPRETREENIASPARVTDGIFPNVASTFWKKR
Sbjct:    1 MAALFEAFIDSAISLLPPGIPPPLPIFNRISNTVRFGMGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTPGTPRETREENIASPARVTDGIFPNVASTFWKKR 188
[Close]
BLAST of EWM26960.1 vs. NCBI_GenBank
Match: gi|553180206|ref|XP_005853363.1| (hypothetical protein NGA_0692600, partial [Nannochloropsis gaditana CCMP526] >gi|422295699|gb|EKU22998.1| hypothetical protein NGA_0692600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 238.424 bits (607), Expect = 4.788e-78
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0 
Query:   38 MGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTPGTP 158
            MGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTP  P
Sbjct:    1 MGKAPRGRKGGRSKGGRYFAPKARGEGLTKRQCTQRPPPQHYPPPGSTAKRKGRARKQGDRNGHAFSNDYRSRDRGFVLAPKSHQKGGNLFDVMPVGVTRLKKSEKKVGVAILKTLTPALP 121
The following BLAST results are available for this feature:
BLAST of EWM26960.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109116|gb|EWM26960.1|3.473e-133100.00hypothetical protein Naga_101032g1 [Nannochloropsi... [more]
gi|553180206|ref|XP_005853363.1|4.788e-7898.35hypothetical protein NGA_0692600, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3722rna3722Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications