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Properties
| Property Name | Value |
| Product | tryptophan-rich sensory-like protein |
| Orig transcript id | gnl|cribi|Naga_100392g2.5848.mrna |
| Orig protein id | gnl|cribi|Naga_100392g2.5848 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002461.1 | supercontig | CM002461.1:1044214..1045747 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3716 ID=rna3716|Name=rna3716|organism=Nannochloropsis gaditana|type=mRNA|length=2918bp ATGGCCTTGTCCTCGGTCACATCATCTATAGAGCCCTGGGGGTCCTTACC AAGGGAAGGAGACCTCGCCTCGAGGGTTACAGACCTCCCAGTCCTGACGA CCTCCCCCCTGGCAGGGTTGTCCCTCGCACACATGCTCCCAGGAATTTCT CAACCCGAAGCACGCACCTGCGTGGCCGAGTCCTGGCAAGCCATCACAGG ACCCGACGCCTTACTTCCAGAGGAATACCTGCGCCTCCCCACGGCCGAGC TTCAACCTCTGTTCGAAAGCGACCTGCGGGCTTTGGCCGACGCACGGAAC CCCCCGCGGGAACGTTGTCGGCTCGCGCATTACCTGGGCCTATTCAGTGG TACCCCTCGTGGGGCTTGCATGTACGCGCAGGCAGACTGGTACGTGCCCA CGCTCTACGGCGTCGTGGAAGAAATCAACGGCCTGTACGCGTCGGGCCAG GCCCGTCTCCGTGGTCTGTGGACGTTCTTGCGGCATGTCACCGCGGAGAC GCGCCGGTCGCGCGGTGCCTTGCAGGCATTGGTTCATGCGCTTGGCCTTC TGACGGTCTTGGATCTGGCGAACATGGGCCGGACGTCGGCCGAGAGCCGA AGCGGGACGGAGACCGCCCGCCCTCCCTCCCTCCCTCCTTCTTTGTTGGT CCAACTGTCCGAATTTGAAGCCTCCTTAACCGAGACGAAGCTATGTTTGC TGGAGGCGGCTTCCTTGGTGCTGCAGTACTCGCATTCCAAAGGGGAAGTA TGCGGGGCGACGCAGAGCTTGGGCTTGTTTGAAGTGATGGGGGGGGAAGG GAATGCGATCATGGCGGAAGGAGCGGCCGGCTGGCACCTGTTTGTGGGCG CCGGGGGTCTCGGGCCCGTGGCGGCGGCCTTGGCCGGGCTCGAGGAAGGG AAGGAGGAAGGAAGGGAGGAAGGGGTAGGGAAGGAGGAAAAGGGAGAGAG CCTGGAGGTGCGGTCGGCGCGGCGGACGGACCGTTTGTCCATCCTGTCTT TTCTAACGGATCTGGGTCCGGCCCACGCCACCTTAATCCTCCCCATGGTG GGTGCATTGGTGCGATGGGCAGGGAAGGAAAACCCCGACTACGCGCACGA ACGCACCTTCGCCCTCCTGTCCTTGGCGCGCTTTCTGGCCCAGGGGAAAG ACGGGGAGGATGCCCGGTTTGCAGCTACCTTAGGTTTGTATCCGGTGCTT GTCCGCCGGTTGCAGGGGTACCGAAGGGCCGTCATCGGGGAGGAAGGGAA CGAGGAAAAGCAGAAACGGTGCGCCTGTTGTCAAGGGGAAACGGGCGGGG CGGAAGAGGAGGGAGGGGGGGAAGCAGGGGAGCATGGAGAGCTATTGCCG GCAGCGCTGGGCATGTTGGTAAGTTTGCTCTTACACTCCCCAGAGACATG GGCCACAGCCCGGACGGACGCGGTCCAGGGGGGACCTTTGTACAGAACCT TGAATTCGCTGTTGCACGAAGCCTTGCATTGGGCGCCGGAGCCCATGCGA AGCATAGTGTCCGGCCTGGTGGTGGCCTGCATCGTCCTCCTTGTCCACCC GGTGCCCCCCCAGGGGACGTCCCGTGCCGGAACCCGCACGTCGGAGGCGG GCAGCCGAGGCCGGGTACGCACTGGCGGTACGACAGCGACGAAGGAAAAC TGCCGCGAGGGACAGGACGAGGGGGTAGGGGGGGTGGGAGACCAGGGGGA GATGGTGACGCGCGGGATTTTGACTCGACTGTGGGCCGTGCCGGACGGAA ACCCCCGAAGTTCCTCGGTCTTTTCATGCGTCCGAGAAACGGTCCGGTAC CGACGGTTGACCTGCGCTTCCCCCGGTGTGTGGCGCTTGATGGTCCACGT ATTGCTGGTGGCCTTAATGGTCATCCATCCGCGGGAGGTGGCGGAGGAAG GGAAGGTGGATGGAGGGGAGGAAAAGGCAGGCCCGGAGACCGGTGCTGGC GCCTTGCGGGCGCGGGAAGAGTTTACAGACCACGCGGCGCTGGATGCAGG GGTCCAGTATTTGGCCAGCGCGGTGGTGATGGGGGCGGAGGGGAGAAAGG AATGGGAGGAGGTGCGGGCCACGTTTTGGGCAGATGGAACGGCCGCCTTG TTGGAAATGCTGCAAAAGAAGAACAAGGATCGAGGGGGGCTGATGCTCTG GGGGCCGGGCGGATGGGAGGGATTGGAAGGGGTGGGAGGAGGGGGGGAAG GAAGCGTGTGCGGGATGTGTGGGATCAGTGCCGAGATGCTGGGCCGGAAC ACTTTGTTGCGGTGCGCACGCTGCCGACGCGTGAGATACTGCTCCAAGGG GTGTCAGGTCTGGCACTGGAAGAAGGGAGGACACCGAGAAGCCTGTCAGA GCCCCCCACCGGAGCCTGAGCCTTCGCCCGCCCCCTCCGTGCCCGTTGCG GCTTCGCCCCCTCCTTCCCCCTCTTCCTCGACGTCGCCTGCCTCCTCTCC CCCTCCTCCTTGCTCCTTCCTGCTCTCCTCCTCTTCCTCCCCCGGCCCCT GCGTCCCCCAAAATTCCGCGAAGGACTTGGCCGGCGACAGCGCGGCCCTG GCGCAACAGCAATAAATGACTCAGGACGGTGGCGTAAGGGAGACTCGTCT TGTACAAAGGAGGCATAAAGCGTGTGACTTTGACAAGTATTGACTATGGT GCTTCAACATAAGAGATTTTAAAGCGGCTTGTAAGCAAAAATGCAACGCA CATTCAAAGAAGACTTTCTAATCAAAGAAGACTTTCTAAAGAAAATCTTG TCGGCAAGACAGATTAGAGCTGGGCTTTCAGTTGCATTTGTCCTGCCTTT TGCCGTTTCTCAATCGTGTCAAATGCCAGCTCTTGATGGCAGCCTGTTGA ATGCCTCACGCGTTCGACTCGGGCTTGGGACTCGACGGACGGGCTCGATG CTCGCCCGTTTTCTCTTT back to topprotein sequence of rna3716 >rna3716-protein ID=rna3716-protein|Name=rna3716|organism=Nannochloropsis gaditana|type=polypeptide|length=380bp MKQTTMLPLSLVCRANCLVLGLLLLLAATHAFRLKGLPSTTRQTSKLLLH PSPHQTLITGQPSRPTRITIAYLSSFARRVAPSRSMVVAASGTEYLDNLP SRASKKGPPMQWGALGTWILATALQFATIVAFMYGMEKAFLRFNLSKQAS IWLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAF PVIWISIGVLRTIASSLVYETTNTLLSPALLAFVLHLCVRSWGVFGLAFG RECGQDVCTYPALGRESASAQCRVDYDRERVGHLDMEAEWSRAFVSVQKT AGMKRNACLVTYRSVGARVCSEHAPFDLGGILSVLERASRYKFVMEYNKR SIRKTIRSSSFINSERNNQSIASKRDYCGD back to topmRNA from alignment at CM002461.1:1044214..1045747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3716 ID=rna3716|Name=rna3716|organism=Nannochloropsis gaditana|type=mRNA|length=1534bp|location=Sequence derived from alignment at CM002461.1:1044214..1045747+ (Nannochloropsis gaditana) ATGAAACAGACGACCATGCTACCGCTGTCTTTGGTCTGTAGGGCGAATTG
CCTGGTACTGGGACTCTTGCTTCTTCTGGCGGCCACCCATGCTTTTCGGT
TGAAGGGCCTCCCCAGCACGACACGACAAACAAGCAAGCTGCTCCTACAC
CCATCTCCGCACCAAACCCTCATTACAGGGCAGCCATCACGCCCCACGCG
CATAACGATAGCTTATCTTTCGTCATTTGCGCGGCGGGTGGCCCCATCCA
GGTCCATGGTCGTGGCGGCTTCGGGGACAGAGTACTTGgacaacctcccc
tcccgcgcgTCGAAGAAAGGACCCCCTATGCAGTGGGGTGCCCTAGGCAC
TTGGATACTGGCCACTGCCTTACAATTTGCGACAATTGTAGCCTTTATGT
ACgggatggaaaaggcgtTCCTGAGATTCAACTTGTCGAAGCAAGCAAGC
ATTTGGCTCGTCCGGGCGTTTTTCGCCTTCATGAGCTTGAGGTGGGTATC
GATGCAATGCAGCCTGTAAGGTGCCAACATGGCACGCCGTTGCTTTCTAA
CGCACATTTCAATCGATTGATGACGTCGTGTTATCACCGTTCATGGGTAC
AGATCGCGagtcttctccatcctcgATAACTCCCGCCCCACGGTGGCcat
ggaggacaggaaaCGCAGGCTTCGCAAACGCCCTTCCTGGATGTAAGTGC
CCAGTCCTTTATCATGGACGAATTGTTGTCGCTAATACATCTCTCGTCTC
GGTGTGTTGACAATGAAAGCATGCGCCCTGCTAAATCGCAGCACAGgagc
tttctcttcctcctgactCCTGCTTGTCCCTCACGCGCTCTGTTCCACAC
GGAATCTCtgaccctttctttccaaacAGGCCACCTGCCAAAGCCTTTCC
CGTCATTTGGATTTCCATTGGTGTCCTTCGTACtattgcctcctcccttg
tgTACGAGACGACCAAtactctcctctcccccgctctcctcgccttcgtc
tTGCACCTGTCCGTTGGTGATACCTGGAACACGATCACCAACGTGGAGGA
TCGACAAGGTGCGTCCGTTCCTGGGGTGTTTTTGGTCTGGCTTTCGGTCG
TGAATGCGGTCAGGATGTATGCACATACCCTGCCCTTGGCAGGGAAAGTG
CTAGCGCCCAGTGCCGTGTGGATTACGATCGCGAACGTGTTGGTCATCTC
GATATGGAGGCTGAATGGAGCAGAGCCTTTGTATCCGTTCAAAAAACGGC
GGGAATGAAACGTAATGCCTGTCTTGTGACTTATCGGTCAGTGGGGGCGA
GGGTGTGCTCGGAGCATGCGCCGTTTGATCTTGGTGGTATATTGAGTGTG
TTAGAGAGGGCATCGAGGTATAAATTTGTTTTGCTCCTTCCTGCGCATTT
AGTCGTGTGAGACTTATGAGGTGATGGAGTACAACAAACGCTCCATAAGA
AAAACGATAAGAAGCAGCTCATTTATAAATTCGGAACGAAATAATCAGAG
CATAGCAAGCAAGAGGGATTATTGCGGCGATTAG back to topCoding sequence (CDS) from alignment at CM002461.1:1044214..1045747+ >rna3716 ID=rna3716|Name=rna3716|organism=Nannochloropsis gaditana|type=CDS|length=5715bp|location=Sequence derived from alignment at CM002461.1:1044214..1045747+ (Nannochloropsis gaditana) ATGAAACAGACGACCATGCTACCGCTGTCTTTGGTCTGTAGGGCGAATTG CCTGGTACTGGGACTCTTGCTTCTTCTGGCGGCCACCCATGCTTTTCGGT TGAAGGGCCTCCCCAGCACGACACGACAAACAAGCAAGCTGCTCCTACAC CCATCTCCGCACCAAACCCTCATTACAGGGCAGCCATCACGCCCCACGCG CATAACGATAGCTTATCTTTCGTCATTTGCGCGGCGGGTGGCCCCATCCA GGTCCATGGTCGTGGCGGCTTCGGGGACAGAGTACTTGgacaacctcccc tcccgcgcgTCGAAGAAAGGACCCCCTATGCAGTGGGGTGCCCTAGGCAC TTGGATACTGGCCACTGCCTTACAATTTGCGACAATTGTAGCCTTTATGT ACgggatggaaaaggcgtTCCTGAGATTCAACTTGTCGAAGCAAGCAAGC ATTTGGCTCGTCCGGGCGTTTTTCGCCTTCATGAGCTTGAGATCGCGagt cttctccatcctcgATAACTCCCGCCCCACGGTGGCcatggaggacagga aaCGCAGGCTTCGCAAACGCCCTTCCTGGATGCCACCTGCCAAAGCCTTT CCCGTCATTTGGATTTCCATTGGTGTCCTTCGTACtattgcctcctccct tgtgTACGAGACGACCAAtactctcctctcccccgctctcctcgccttcg tctTGCACCTGTGCGTCCGTTCCTGGGGTGTTTTTGGTCTGGCTTTCGGT CGTGAATGCGGTCAGGATGTATGCACATACCCTGCCCTTGGCAGGGAAAG TGCTAGCGCCCAGTGCCGTGTGGATTACGATCGCGAACGTGTTGGTCATC TCGATATGGAGGCTGAATGGAGCAGAGCCTTTGTATCCGTTCAAAAAACG GCGGGAATGAAACGTAATGCCTGTCTTGTGACTTATCGGTCAGTGGGGGC GAGGGTGTGCTCGGAGCATGCGCCGTTTGATCTTGGTGGTATATTGAGTG TGTTAGAGAGGGCATCGAGGTATAAATTTGTGATGGAGTACAACAAACGC TCCATAAGAAAAACGATAAGAAGCAGCTCATTTATAAATTCGGAACGAAA TAATCAGAGCATAGCAAGCAAGAGGGATTATTGCGGCGATTAGATGAAAC AGACGACCATGCTACCGCTGTCTTTGGTCTGTAGGGCGAATTGCCTGGTA CTGGGACTCTTGCTTCTTCTGGCGGCCACCCATGCTTTTCGGTTGAAGGG CCTCCCCAGCACGACACGACAAACAAGCAAGCTGCTCCTACACCCATCTC CGCACCAAACCCTCATTACAGGGCAGCCATCACGCCCCACGCGCATAACG ATAGCTTATCTTTCGTCATTTGCGCGGCGGGTGGCCCCATCCAGGTCCAT GGTCGTGGCGGCTTCGGGGACAGAGTACTTGgacaacctcccctcccgcg cgTCGAAGAAAGGACCCCCTATGCAGTGGGGTGCCCTAGGCACTTGGATA CTGGCCACTGCCTTACAATTTGCGACAATTGTAGCCTTTATGTACgggat ggaaaaggcgtTCCTGAGATTCAACTTGTCGAAGCAAGCAAGCATTTGGC TCGTCCGGGCGTTTTTCGCCTTCATGAGCTTGAGATCGCGagtcttctcc atcctcgATAACTCCCGCCCCACGGTGGCcatggaggacaggaaaCGCAG GCTTCGCAAACGCCCTTCCTGGATGCCACCTGCCAAAGCCTTTCCCGTCA TTTGGATTTCCATTGGTGTCCTTCGTACtattgcctcctcccttgtgTAC GAGACGACCAAtactctcctctcccccgctctcctcgccttcgtctTGCA CCTGTGCGTCCGTTCCTGGGGTGTTTTTGGTCTGGCTTTCGGTCGTGAAT GCGGTCAGGATGTATGCACATACCCTGCCCTTGGCAGGGAAAGTGCTAGC GCCCAGTGCCGTGTGGATTACGATCGCGAACGTGTTGGTCATCTCGATAT GGAGGCTGAATGGAGCAGAGCCTTTGTATCCGTTCAAAAAACGGCGGGAA TGAAACGTAATGCCTGTCTTGTGACTTATCGGTCAGTGGGGGCGAGGGTG TGCTCGGAGCATGCGCCGTTTGATCTTGGTGGTATATTGAGTGTGTTAGA GAGGGCATCGAGGTATAAATTTGTGATGGAGTACAACAAACGCTCCATAA GAAAAACGATAAGAAGCAGCTCATTTATAAATTCGGAACGAAATAATCAG AGCATAGCAAGCAAGAGGGATTATTGCGGCGATTAGATGAAACAGACGAC CATGCTACCGCTGTCTTTGGTCTGTAGGGCGAATTGCCTGGTACTGGGAC TCTTGCTTCTTCTGGCGGCCACCCATGCTTTTCGGTTGAAGGGCCTCCCC AGCACGACACGACAAACAAGCAAGCTGCTCCTACACCCATCTCCGCACCA AACCCTCATTACAGGGCAGCCATCACGCCCCACGCGCATAACGATAGCTT ATCTTTCGTCATTTGCGCGGCGGGTGGCCCCATCCAGGTCCATGGTCGTG GCGGCTTCGGGGACAGAGTACTTGgacaacctcccctcccgcgcgTCGAA GAAAGGACCCCCTATGCAGTGGGGTGCCCTAGGCACTTGGATACTGGCCA CTGCCTTACAATTTGCGACAATTGTAGCCTTTATGTACgggatggaaaag gcgtTCCTGAGATTCAACTTGTCGAAGCAAGCAAGCATTTGGCTCGTCCG GGCGTTTTTCGCCTTCATGAGCTTGAGATCGCGagtcttctccatcctcg ATAACTCCCGCCCCACGGTGGCcatggaggacaggaaaCGCAGGCTTCGC AAACGCCCTTCCTGGATGCCACCTGCCAAAGCCTTTCCCGTCATTTGGAT TTCCATTGGTGTCCTTCGTACtattgcctcctcccttgtgTACGAGACGA CCAAtactctcctctcccccgctctcctcgccttcgtctTGCACCTGTGC GTCCGTTCCTGGGGTGTTTTTGGTCTGGCTTTCGGTCGTGAATGCGGTCA GGATGTATGCACATACCCTGCCCTTGGCAGGGAAAGTGCTAGCGCCCAGT GCCGTGTGGATTACGATCGCGAACGTGTTGGTCATCTCGATATGGAGGCT GAATGGAGCAGAGCCTTTGTATCCGTTCAAAAAACGGCGGGAATGAAACG TAATGCCTGTCTTGTGACTTATCGGTCAGTGGGGGCGAGGGTGTGCTCGG AGCATGCGCCGTTTGATCTTGGTGGTATATTGAGTGTGTTAGAGAGGGCA TCGAGGTATAAATTTGTGATGGAGTACAACAAACGCTCCATAAGAAAAAC GATAAGAAGCAGCTCATTTATAAATTCGGAACGAAATAATCAGAGCATAG CAAGCAAGAGGGATTATTGCGGCGATTAGATGAAACAGACGACCATGCTA CCGCTGTCTTTGGTCTGTAGGGCGAATTGCCTGGTACTGGGACTCTTGCT TCTTCTGGCGGCCACCCATGCTTTTCGGTTGAAGGGCCTCCCCAGCACGA CACGACAAACAAGCAAGCTGCTCCTACACCCATCTCCGCACCAAACCCTC ATTACAGGGCAGCCATCACGCCCCACGCGCATAACGATAGCTTATCTTTC GTCATTTGCGCGGCGGGTGGCCCCATCCAGGTCCATGGTCGTGGCGGCTT CGGGGACAGAGTACTTGgacaacctcccctcccgcgcgTCGAAGAAAGGA CCCCCTATGCAGTGGGGTGCCCTAGGCACTTGGATACTGGCCACTGCCTT ACAATTTGCGACAATTGTAGCCTTTATGTACgggatggaaaaggcgtTCC TGAGATTCAACTTGTCGAAGCAAGCAAGCATTTGGCTCGTCCGGGCGTTT TTCGCCTTCATGAGCTTGAGATCGCGagtcttctccatcctcgATAACTC CCGCCCCACGGTGGCcatggaggacaggaaaCGCAGGCTTCGCAAACGCC CTTCCTGGATGCCACCTGCCAAAGCCTTTCCCGTCATTTGGATTTCCATT GGTGTCCTTCGTACtattgcctcctcccttgtgTACGAGACGACCAAtac tctcctctcccccgctctcctcgccttcgtctTGCACCTGTGCGTCCGTT CCTGGGGTGTTTTTGGTCTGGCTTTCGGTCGTGAATGCGGTCAGGATGTA TGCACATACCCTGCCCTTGGCAGGGAAAGTGCTAGCGCCCAGTGCCGTGT GGATTACGATCGCGAACGTGTTGGTCATCTCGATATGGAGGCTGAATGGA GCAGAGCCTTTGTATCCGTTCAAAAAACGGCGGGAATGAAACGTAATGCC TGTCTTGTGACTTATCGGTCAGTGGGGGCGAGGGTGTGCTCGGAGCATGC GCCGTTTGATCTTGGTGGTATATTGAGTGTGTTAGAGAGGGCATCGAGGT ATAAATTTGTGATGGAGTACAACAAACGCTCCATAAGAAAAACGATAAGA AGCAGCTCATTTATAAATTCGGAACGAAATAATCAGAGCATAGCAAGCAA GAGGGATTATTGCGGCGATTAGATGAAACAGACGACCATGCTACCGCTGT CTTTGGTCTGTAGGGCGAATTGCCTGGTACTGGGACTCTTGCTTCTTCTG GCGGCCACCCATGCTTTTCGGTTGAAGGGCCTCCCCAGCACGACACGACA AACAAGCAAGCTGCTCCTACACCCATCTCCGCACCAAACCCTCATTACAG GGCAGCCATCACGCCCCACGCGCATAACGATAGCTTATCTTTCGTCATTT GCGCGGCGGGTGGCCCCATCCAGGTCCATGGTCGTGGCGGCTTCGGGGAC AGAGTACTTGgacaacctcccctcccgcgcgTCGAAGAAAGGACCCCCTA TGCAGTGGGGTGCCCTAGGCACTTGGATACTGGCCACTGCCTTACAATTT GCGACAATTGTAGCCTTTATGTACgggatggaaaaggcgtTCCTGAGATT CAACTTGTCGAAGCAAGCAAGCATTTGGCTCGTCCGGGCGTTTTTCGCCT TCATGAGCTTGAGATCGCGagtcttctccatcctcgATAACTCCCGCCCC ACGGTGGCcatggaggacaggaaaCGCAGGCTTCGCAAACGCCCTTCCTG GATGCCACCTGCCAAAGCCTTTCCCGTCATTTGGATTTCCATTGGTGTCC TTCGTACtattgcctcctcccttgtgTACGAGACGACCAAtactctcctc tcccccgctctcctcgccttcgtctTGCACCTGTGCGTCCGTTCCTGGGG TGTTTTTGGTCTGGCTTTCGGTCGTGAATGCGGTCAGGATGTATGCACAT ACCCTGCCCTTGGCAGGGAAAGTGCTAGCGCCCAGTGCCGTGTGGATTAC GATCGCGAACGTGTTGGTCATCTCGATATGGAGGCTGAATGGAGCAGAGC CTTTGTATCCGTTCAAAAAACGGCGGGAATGAAACGTAATGCCTGTCTTG TGACTTATCGGTCAGTGGGGGCGAGGGTGTGCTCGGAGCATGCGCCGTTT GATCTTGGTGGTATATTGAGTGTGTTAGAGAGGGCATCGAGGTATAAATT TGTGATGGAGTACAACAAACGCTCCATAAGAAAAACGATAAGAAGCAGCT CATTTATAAATTCGGAACGAAATAATCAGAGCATAGCAAGCAAGAGGGAT TATTGCGGCGATTAG back to top
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